>SFH784 (SFH784Q) /CSM/SF/SFH7-D/SFH784Q.Seq.d/
XXXXXXXXXXGGNNNNANNGNNNNNNNNNNNNNNNNNNNNANNGGNGNTGGNNNAGCNNT
NNTNNNNNTTTGTANANTTNATGGNGCNNCANNNATCATNGGCNNTGTTGGTTNTNATGA
AAAAGCAAAGTTTATTGAAAAATTAGGTGCAACCCATTCGGTCAATTATAAAACCAATGA
AAACTTTTTANACGTAATCAATGATGTCACCTCCAAAAAAAAGGTGTAAACAATGTATTT
GATTATGTTGGTGCTAAATATTGGAACCAAAATTTAAAATCACTTTCAATGGATGGCGTT
ATGATTATTCAAGGATTTTTATCAGGATCACATATTAAAGATACAGCAGCTGATATTACA
CCAATTTTAGGTAAAAGATTAACAATTAAAGGATCAACATTAAGAAATCGTGATAATGAT
TATAAAGCTGATTTAGTTGCTCAATTTTCAAAGAGATATTTAACCCTATTTGAATCTGGT
GAATTAAAACCAATTGTTGATAAAG

---xxxxxxxxxxxxwxsxxxxlxxxwxxxxhxxcwxx*kskvy*kircnpfgql*nq*k
lfxrnq*CHLQKKGVNNVFDYVGAKYWNQNLKSLSMDGVMIIQGFLSGSHIKDTAADITP
ILGKRLTIKGSTLRNRDNDYKADLVAQFSKRYLTLFESGELKPIVDK

Frame A:
---xxxxxxxxxxxxxxxxxxxfvxxmxxxxsxaxlvxmkkqsllkn*vqpirsiikpmk
tfxt*smmsppkkrckqci*lcwc*ilepkfkitfngwrydysrifirity*ryss*yyt
nfr*kinn*rinikks***l*s*fscsifkeifnpi*iw*iktnc**


Frame B:
---xxxxxxxxxxxxwxsxxxxlxxxwxxxxhxxcwxx*kskvy*kircnpfgql*nq*k
lfxrnq*CHLQKKGVNNVFDYVGAKYWNQNLKSLSMDGVMIIQGFLSGSHIKDTAADITP
ILGKRLTIKGSTLRNRDNDYKADLVAQFSKRYLTLFESGELKPIVDK


Frame C:
---xxxxxxxxxxgxgxaxxxxcxxxgaxxixgxvgxxekakfieklgathsvnyktnen
flxvindvtskkkv*tmylimlvlnigtki*nhfqwmal*lfkdfyqdhilkiqqlilhq
f*vkd*qlkdqh*eivimiikli*llnfqrdi*pylnlvn*nqllik

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SFH784 (SFH784Q) /CSM/SF/SFH7-D/SFH784Q.Seq.d/                        731   0.0
VFH577 (VFH577Q) /CSM/VF/VFH5-D/VFH577Q.Seq.d/                        722   0.0
VFB444 (VFB444Q) /CSM/VF/VFB4-B/VFB444Q.Seq.d/                        722   0.0
SLG703 (SLG703Q) /CSM/SL/SLG7-A/SLG703Q.Seq.d/                        722   0.0
SFK801 (SFK801Q) /CSM/SF/SFK8-A/SFK801Q.Seq.d/                        722   0.0
SFJ842 (SFJ842Q) /CSM/SF/SFJ8-B/SFJ842Q.Seq.d/                        722   0.0
SFI707 (SFI707Q) /CSM/SF/SFI7-A/SFI707Q.Seq.d/                        722   0.0
SLA437 (SLA437Q) /CSM/SL/SLA4-B/SLA437Q.Seq.d/                        718   0.0
CFD142 (CFD142Q) /CSM/CF/CFD1-B/CFD142Q.Seq.d/                        716   0.0
SFC380 (SFC380Q) /CSM/SF/SFC3-D/SFC380Q.Seq.d/                        704   0.0

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

AC115577|AC115577.2 Dictyostelium discoideum chromosome 2 map 4657875-4914984 strain AX4, complete sequence.   383  0.0  3
AP006148|AP006148.1 Lotus japonicus genomic DNA, chromosome 2, clone:LjT41D09, TM0304.    40  0.075  5
AX345512|AX345512.1 Sequence 583 from Patent WO0200928.           42  0.13  3
AG227185|AG227185.1 Lotus japonicus DNA, clone:LjB140i05_r.       42  0.22  2
BE030171|BE030171.1 kp39e06.y1 TBN95TM-SSFH Strongyloides stercoralis cDNA 5' similar to WP:T14G8.3 CE03659 HEAT SHOCK PROTEIN ;, mRNA sequence.    42  0.60  2
U12613|U12613.1 Mus musculus B10.A dipeptidyl peptidase IV (CD26) gene, exon 19.    40  0.82  2
AB036666|AB036666.1 Wolbachia sp. wKue genes, bacteriophage WO genes in Wolbachia strain wKue chromosome, partial and complete cds.    40  1.4  5
AQ377012|AQ377012.1 RPCI11-151M5.TV RPCI-11 Homo sapiens genomic clone RPCI-11-151M5, genomic survey sequence.    44  1.6  1
AC106142|AC106142.4 Rattus norvegicus clone CH230-226P4, WORKING DRAFT SEQUENCE, 3 unordered pieces.    44  1.6  1
AZ677019|AZ677019.1 ENTHK31TF Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    44  1.6  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM270353_41(AM270353|pid:none) Aspergillus niger contig An16c001...    69   3e-15
AM902716_1632(AM902716|pid:none) Bordetella petrii strain DSM 12...    67   7e-15
CP000250_4465(CP000250|pid:none) Rhodopseudomonas palustris HaA2...    62   7e-14
CP000283_4323(CP000283|pid:none) Rhodopseudomonas palustris BisB...    64   1e-13
BX640413_117(BX640413|pid:none) Bordetella pertussis strain Toha...    67   2e-13
CP001349_454(CP001349|pid:none) Methylobacterium nodulans ORS 20...    71   4e-13
CP000686_3656(CP000686|pid:none) Roseiflexus sp. RS-1, complete ...    72   4e-13
F97459(F97459)probable quinone oxidoreductase [imported] - Agrob...    69   1e-12
BX572595_284(BX572595|pid:none) Rhodopseudomonas palustris CGA00...    62   1e-12
CP001096_979(CP001096|pid:none) Rhodopseudomonas palustris TIE-1...    62   1e-12

 psg: 0.66  gvh: 0.43  alm: 0.45  top: 0.53  tms: 0.00  mit: 0.20  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: cytoplasmic
	 20.0 %: mitochondrial
	 20.0 %: nuclear
	  8.0 %: cytoskeletal

>> prediction for SFH784 is cyt

>SFH784Z.Seq
NNNNNNNNNNGGNNNNANNGNNNNNNNNNNNNNNNNNNNNANNGGNGNTGGNNNAGCNNT
NNTNNNNNTTTGTANANTTNATGGNGCNNCANNNATCATNGGCNNTGTTGGTTNTNATGA
AAAAGCAAAGTTTATTGAAAAATTAGGTGCAACCCATTCGGTCAATTATAAAACCAATGA
AAACTTTTTANACGTAATCAATGATGTCACCTCCAAAAAAAAGGTGTAAACAATGTATTT
GATTATGTTGGTGCTAAATATTGGAACCAAAATTTAAAATCACTTTCAATGGATGGCGTT
ATGATTATTCAAGGATTTTTATCAGGATCACATATTAAAGATACAGCAGCTGATATTACA
CCAATTTTAGGTAAAAGATTAACAATTAAAGGATCAACATTAAGAAATCGTGATAATGAT
TATAAAGCTGATTTAGTTGCTCAATTTTCAAAGAGATATTTAACCCTATTTGAATCTGGT
GAATTAAAACCAATTGTTGATAAAG