>SFH656 (SFH656Q) /CSM/SF/SFH6-C/SFH656Q.Seq.d/
XXXXXXXXXXGNNNNTCATAAAGCNATGGTNCNNTTAGNANCNCCAGCAGGTATGGGTAT
TCAAAATTTTAAGAATTCAGTTGCAATTTTTGTNCCACGTGATAGATATCGTCCAATTAA
ATCAACAAGTCAATTATTGGTTGCACAATCAAATATTTTCCAATTTGATCATGGTCAAGT
TAAATTAAATTCAAAGAGAGAAGGTCAAGATGTACCACTTGTTAAATTGGGTGAAGAATT
TTCAACAGTTTCAGATTATGAAAAGAGATTTAAATCAATTCCAGATTTATTGGAATTGGA
TCATCTTACTGTTTCTGGTGATGTTTACTTTGGTTCAAGAATTACTCTTAAAGGTACAGT
CATTATTGTAGCTAATCATGGTGAACGTGTTGATATTCCAGTATGGTGTGGTTTTAGAAA
ATAAAG

---XHKAMVXLXXPAGMGIQNFKNSVAIFVPRDRYRPIKSTSQLLVAQSNIFQFDHGQVK
LNSKREGQDVPLVKLGEEFSTVSDYEKRFKSIPDLLELDHLTVSGDVYFGSRITLKGTVI
IVANHGERVDIPVWCGFRK*

Frame A:
---xxikxwxx*xxqqvwvfkilriqlqflxhvidivqlnqqvnywlhnqifsnlimvkl
n*iqrekvkmyhllnwvknfqqfqimkrdlnqfqiywnwiillflvmftlvqelllkvqs
ll*limvnvlifqygvvlenk


Frame B:
---xs*sxgxxxxxsrygyskf*efscnfcxt**issn*inksiigctikyfpi*swss*
ikfkerrsrcttc*ig*rifnsfrl*kei*insrfigigssycfw*cllwfknys*rysh
ycs*sw*tc*yssmvwf*kik


Frame C:
---XHKAMVXLXXPAGMGIQNFKNSVAIFVPRDRYRPIKSTSQLLVAQSNIFQFDHGQVK
LNSKREGQDVPLVKLGEEFSTVSDYEKRFKSIPDLLELDHLTVSGDVYFGSRITLKGTVI
IVANHGERVDIPVWCGFRK*

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SFH656 (SFH656Q) /CSM/SF/SFH6-C/SFH656Q.Seq.d/                        767   0.0
AFD344 (AFD344Q) /CSM/AF/AFD3-B/AFD344Q.Seq.d/                        761   0.0
VFL461 (VFL461Q) /CSM/VF/VFL4-C/VFL461Q.Seq.d/                        751   0.0
VFK853 (VFK853Q) /CSM/VF/VFK8-C/VFK853Q.Seq.d/                        751   0.0
SSK668 (SSK668Q) /CSM/SS/SSK6-C/SSK668Q.Seq.d/                        751   0.0
SSI236 (SSI236Q) /CSM/SS/SSI2-B/SSI236Q.Seq.d/                        751   0.0
SSH420 (SSH420Q) /CSM/SS/SSH4-A/SSH420Q.Seq.d/                        751   0.0
SSF238 (SSF238Q) /CSM/SS/SSF2-B/SSF238Q.Seq.d/                        751   0.0
SSE519 (SSE519Q) /CSM/SS/SSE5-A/SSE519Q.Seq.d/                        751   0.0
SSB729 (SSB729Q) /CSM/SS/SSB7-B/SSB729Q.Seq.d/                        751   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

Y00145|Y00145.1 Dictyostelium discoideum UDP glucose pyrophosphorylase gene (UDPGP;  EC 2.7.7.9).   718   0.0    2
AF150929|AF150929.1 Dictyostelium discoideum UDP-glucose pyrophosphorylase 2 (UDPGP2) mRNA, complete cds.    50   1e-05  3
BI322718|BI322718.1 kx15d03.y3 Parastrongyloides trichosuri IL pAMP1 v1 Chiapelli McCarter Parastrongyloides trichosuri cDNA 5' similar to TR:Q9XUS6 Q9XUS6 K08E3.5A PROTEIN. [1] ;, mRNA sequence.    36   0.001  2
BI743473|BI743473.1 kx44f12.y1 Parastrongyloides trichosuri FL pAMP1 v1 Chiapelli McCarter Parastrongyloides trichosuri cDNA 5' similar to TR:Q9XUS6 Q9XUS6 K08E3.5A PROTEIN. [1] ;, mRNA sequence.    36   0.020  2
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4, complete sequence.    34   0.029  13
BI742772|BI742772.1 kx34h07.y1 Parastrongyloides trichosuri IL pAMP1 v1 Chiapelli McCarter Parastrongyloides trichosuri cDNA 5' similar to TR:Q9XUS6 Q9XUS6 K08E3.5A PROTEIN. [1] ;, mRNA sequence.    36   0.075  2
AP005311|AP005311.2 Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0482F12.    42   0.27   2
BF249948|BF249948.1 pa88g07.y1 Hawdon Ancylostoma caninum L3 Ancylostoma caninum cDNA 5' similar to TR:Q9XUS6 Q9XUS6 K08E3.5A PROTEIN. [1] ;, mRNA sequence.    46   0.38   1
BQ666262|BQ666262.1 pb38g03.y1 Anc caninum L3 serum stim pAMP1 v1 Chiapelli McCarter Ancylostoma caninum cDNA 5' similar to TR:Q9XUS6 Q9XUS6 K08E3.5A PROTEIN. [1] ;, mRNA sequence.    46   0.38   1
CC768708|CC768708.1 CH240_68A20.TV CHORI-240 Bos taurus genomic clone CH240_68A20, genomic survey sequence.    42   0.39   2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(P08800) RecName: Full=UTP--glucose-1-phosphate uridylyltransfer...   248   5e-65
BC026626_1(BC026626|pid:none) Mus musculus UDP-glucose pyrophosp...   148   5e-35
S35692(S35692)UTP-glucose-1-phosphate uridylyltransferase (EC 2....   148   5e-35
(Q91ZJ5) RecName: Full=UTP--glucose-1-phosphate uridylyltransfer...   148   5e-35
S62599(S62599)UTP-glucose-1-phosphate uridylyltransferase (EC 2....   148   5e-35
AK153885_1(AK153885|pid:none) Mus musculus 2 days neonate thymus...   148   5e-35
AK300731_1(AK300731|pid:none) Homo sapiens cDNA FLJ56155 complet...   148   5e-35
BC084711_1(BC084711|pid:none) Rattus norvegicus UDP-glucose pyro...   148   5e-35
AF534111_1(AF534111|pid:none) Gallus gallus UDP-glucose pyrophos...   148   5e-35
(Q07130) RecName: Full=UTP--glucose-1-phosphate uridylyltransfer...   148   5e-35

 psg: 0.86  gvh: 0.49  alm: 0.40  top: 0.57  tms: 0.00  mit: 0.30  mip: 0.06
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 36.0 %: nuclear
	 32.0 %: cytoplasmic
	 16.0 %: mitochondrial
	  8.0 %: cytoskeletal
	  4.0 %: vesicles of secretory system
	  4.0 %: endoplasmic reticulum

>> prediction for SFH656 is nuc

>SFH656Z.Seq
NNNNNNNNNNGNNNNTCATAAAGCNATGGTNCNNTTAGNANCNCCAGCAGGTATGGGTAT
TCAAAATTTTAAGAATTCAGTTGCAATTTTTGTNCCACGTGATAGATATCGTCCAATTAA
ATCAACAAGTCAATTATTGGTTGCACAATCAAATATTTTCCAATTTGATCATGGTCAAGT
TAAATTAAATTCAAAGAGAGAAGGTCAAGATGTACCACTTGTTAAATTGGGTGAAGAATT
TTCAACAGTTTCAGATTATGAAAAGAGATTTAAATCAATTCCAGATTTATTGGAATTGGA
TCATCTTACTGTTTCTGGTGATGTTTACTTTGGTTCAAGAATTACTCTTAAAGGTACAGT
CATTATTGTAGCTAATCATGGTGAACGTGTTGATATTCCAGTATGGTGTGGTTTTAGAAA
ATAAAG