SFG643
Library SF
(Link to library)
Clone ID SFG643
Atlas ID -
NBRP ID -
dictyBase ID -
Link to Contig Contig-U16252-1
Original site URL
Representative seq. ID SFG643P
(Link to Original site)
Representative DNA sequence
>SFG643 (SFG643Q) /CSM/SF/SFG6-B/SFG643Q.Seq.d/
ACTTATTACTTTATTTTTTTTTATCTCTATCTATATATATATCATTTTTTAAAATGAGCG
TCATCAAATCAATTAAAGCCAGAGAAATTTTAGATTCACGTGGTAACCCAACTGTTGAAG
TTGACCTTTACACCGAAAAAGATGGTGTTGTTTCATCATTCAGAGCTGCAGTTCCATCAG
GTGCATCAACTGGTATTTATGAAGCTGTTGAATTAAGAGATGGTGATAAATCAAGATACT
TAGGTAAAGGTGTACTCAAAGCAATCAAAAACATTCTCGAAGTCATTCAACCAGCCGTCA
TCGGTAAATCAGTTTCCGATCAAGCTGCTATCGATAAATTAATGATCGATCTCGATGGTA
CCCCAAATAAAGGTAAATTAGGTGCCAACGCTATCCTTGCAGTCAGTTTAGCTGTTTGCA
GAGCTGGTGCTGCTGATAGAAATTTACCACTTTACAAATATATCTCAGAAATTGCAGGTA
CTAAAATGAGATTACCAGTTCCAGCATTCAATGTTATCAATGGTGGTTCACATGCAGGTA
ATAAATTAGCTATGCAAGAATTTATGATTTTACCAGXXXXXXXXXXGGTTCAGAAGTTTA
TCATAACTTAAAGAATGTCATCAGTGGTAGATACGGTCAAGATGCTATCAATGTTGGTGA
TGAAGGTGGTTTCGCTCCACCAATTCAAAGCAACAAAGAAGGTCTTGAACTCTTAAAACT
TGCCATTGAAAAAGCTGGTTACACAGGTTTAGTTAAAATTGGTATGGATTGTGCTGCCTC
TGAATTCAAAGTTGAAAATGGTTACGATCTTGACTTCAAAACTAAAAACAATGACGGTTC
AGCTGTTATCTCTGGTGAAAAATTAGGTGATCCCTACAGAGAATTCATTAAAGAATATCC
AATCATTTCAATTGAAGATCCATTTGATCAAGATGATTGGGAATCATACACTAAATTAAC
AGCATCAGTTGATATTCAAATTGTTGGTGATGATTTACTTGTTACCAACCCAGAAAGAAT
TAAGACTGGTATTGAAAAGAAAGCATGTAATGCTCTTTTATTAAAAGTTAACCAAATTGG
TTCAGTCACTGAATCAATTCGTGCCGCTCTTGACTCAAAGAATGCATCATGGGGTGTCAT
GGTTAGCCATCGTTCAGGTGAAACTGAAGATACCTTCATTGCTGATTTAGTTGTTGGTTT
AGGTACTGGTCAAATTAAAACTGGTGCTCCATGTAGATCAGAAAGATTAGCCAAATACAA
TCAACTTGTTAGAATTAACGAAGAGTTAGGNAAAACCATAACTATGCGGTTNACTTTCCG
TAAATTTNATTTACTCA
sequence update 2001. 6. 1
Translated Amino Acid sequence
LLLYFFLSLSIYISFFKMSVIKSIKAREILDSRGNPTVEVDLYTEKDGVVSSFRAAVPSG
ASTGIYEAVELRDGDKSRYLGKGVLKAIKNILEVIQPAVIGKSVSDQAAIDKLMIDLDGT
PNKGKLGANAILAVSLAVCRAGAADRNLPLYKYISEIAGTKMRLPVPAFNVINGGSHAGN
KLAMQEFMILP---

---GSEVYHNLKNVISGRYGQDAINVGDEGGFAPPIQSNKEGLELLKLAIEKAGYTGLVK
IGMDCAASEFKVENGYDLDFKTKNNDGSAVISGEKLGDPYREFIKEYPIISIEDPFDQDD
WESYTKLTASVDIQIVGDDLLVTNPERIKTGIEKKACNALLLKVNQIGSVTESIRAALDS
KNASWGVMVSHRSGETEDTFIADLVVGLGTGQIKTGAPCRSERLAKYNQLVRINEELGKT
ITMRXTFRKFXLL


Translated Amino Acid sequence (All Frames)
Frame A:
tyyfiffylylyiyhflk*assnqlkpekf*ihvvtqllkltftpkkmvlfhhselqfhq
vhqlvfmklln*emvinqdt*vkvyskqsktfsksfnqpssvnqfpikllsin**sismv
pqikvn*vptlslqsv*lfaelvllieiyhftnisqklqvlk*dyqfqhsmlsmvvhmqv
in*lcknl*fyq---

---GSEVYHNLKNVISGRYGQDAINVGDEGGFAPPIQSNKEGLELLKLAIEKAGYTGLVK
IGMDCAASEFKVENGYDLDFKTKNNDGSAVISGEKLGDPYREFIKEYPIISIEDPFDQDD
WESYTKLTASVDIQIVGDDLLVTNPERIKTGIEKKACNALLLKVNQIGSVTESIRAALDS
KNASWGVMVSHRSGETEDTFIADLVVGLGTGQIKTGAPCRSERLAKYNQLVRINEELGKT
ITMRXTFRKFXLL

Frame B:
litlfffisiyiyiif*nerhqin*sqrnfrftw*pnc*s*plhrkrwccfiiqscssir
cinwyl*sc*ikrw**ikilr*rctqsnqkhsrshstsrhr*isfrsscyr*indrsrwy
pk*r*ircqrypcsqfsclqswcc**kfttlqiylrncry*neitsssiqcyqwwftcr*
*isyariydft---

---vqkfiit*rmssvvdtvkmlsmlvmkvvslhqfkatkkvlns*nlplkklvtqv*lk
lvwivlplnsklkmvtiltsklktmtvqllslvkn*viptenslkniqsfqlkihlikmi
gnhtln*qhqlifkllvmiyllptqkelrlvlkrkhvmlfy*kltklvqslnqfvplltq
rmhhgvswlaivqvklkipslli*llv*vlvklklvlhvdqkd*pntinlleltks*xkp
*lcgxlsvnxiys

Frame C:
LLLYFFLSLSIYISFFKMSVIKSIKAREILDSRGNPTVEVDLYTEKDGVVSSFRAAVPSG
ASTGIYEAVELRDGDKSRYLGKGVLKAIKNILEVIQPAVIGKSVSDQAAIDKLMIDLDGT
PNKGKLGANAILAVSLAVCRAGAADRNLPLYKYISEIAGTKMRLPVPAFNVINGGSHAGN
KLAMQEFMILP---

---frsls*lkechqw*irsrcyqcw**rwfrstnskqqrrs*tlktch*kswlhrfs*n
wyglccl*iqs*kwlrs*lqn*kq*rfscylw*kir*slqrih*risnhfn*rsi*sr*l
giih*insis*ysncw**ftcyqprkn*dwy*kesm*csfiks*pnwfsh*inscrs*lk
ecimgchg*psfr*n*rylhc*fscwfrywsn*nwcsm*irkisqiqstc*n*rrvrxnh
nyavxfp*ixft

Homology vs CSM-cDNA

Score E
Sequences producing significant alignments: (bits) Value

SFG643 (SFG643Q) /CSM/SF/SFG6-B/SFG643Q.Seq.d/ 2529 0.0
AFC510 (AFC510Q) /CSM/AF/AFC5-A/AFC510Q.Seq.d/ 1417 0.0
SSI448 (SSI448Q) /CSM/SS/SSI4-B/SSI448Q.Seq.d/ 1409 0.0
AFJ620 (AFJ620Q) /CSM/AF/AFJ6-A/AFJ620Q.Seq.d/ 1405 0.0
SLA770 (SLA770Q) /CSM/SL/SLA7-C/SLA770Q.Seq.d/ 1396 0.0
SFE744 (SFE744Q) /CSM/SF/SFE7-B/SFE744Q.Seq.d/ 1392 0.0
SFB722 (SFB722Q) /CSM/SF/SFB7-A/SFB722Q.Seq.d/ 1388 0.0
AFO841 (AFO841Q) /CSM/AF/AFO8-B/AFO841Q.Seq.d/ 1388 0.0
SFH339 (SFH339Q) /CSM/SF/SFH3-B/SFH339Q.Seq.d/ 1374 0.0
SFC169 (SFC169Q) /CSM/SF/SFC1-C/SFC169Q.Seq.d/ 1370 0.0

own update 2004.12.25
Homology vs DNA

Score E
Sequences producing significant alignments: (bits) Value N

X80474|X80474.1 N.frontalis enolase gene. 64 3e-76 13
Y17298|Y17298.1 Cunninghamella elegans mRNA for enolase. 86 1e-75 12
BD183626|BD183626.1 Material for diagnosing malaria and immune antigen for suppressing growth of plasmodium. 76 2e-60 10
BD183625|BD183625.1 Material for diagnosing malaria and immune antigen for suppressing growth of plasmodium. 76 2e-60 10
AB026051|AB026051.1 Plasmodium falciparum mRNA for enolase, complete cds. 76 2e-60 10
U00152|U00152.1 Plasmodium falciparum enolase gene complete cds. 76 1e-58 9
BM165201|BM165201.1 EST567724 PyBS Plasmodium yoelii yoelii cDNA clone PYCMI87 5' end, mRNA sequence. 92 5e-52 5
AF348930|AF348930.1 Tetrahymena bergeri enolase (eno) gene, partial cds. 66 5e-51 7
BM395755|BM395755.1 5009-0-10-H08.t.1 Chilcoat/Turkewitz cDNA (large fraction) Tetrahymena thermophila cDNA, mRNA sequence. 121 2e-48 5
AX619982|AX619982.1 Sequence 2945 from Patent WO02094868. 50 2e-45 10
dna update 2003.12.26
Homology vs Protein

Score E
Sequences producing significant alignments: (bits) Value

(Q54RK5) RecName: Full=Enolase A; EC=4.2.1.11; AltName:... 469 0.0
EF137905_1(EF137905|pid:none) Helianthus annuus plastid enolase ... 359 e-162
AC016662_10(AC016662|pid:none) Arabidopsis thaliana chromosome 1... 352 e-159
DQ497988_1(DQ497988|pid:none) Polypterus senegalus enolase B mRN... 345 e-157
AK243111_1(AK243111|pid:none) Oryza sativa Japonica Group cDNA, ... 348 e-156
BC096516_1(BC096516|pid:none) Xenopus tropicalis hypothetical pr... 337 e-156
T12341(T12341) phosphopyruvate hydratase (EC 4.2.1.11) - common ... 355 e-155
BC045082_1(BC045082|pid:none) Xenopus laevis enolase 3, beta mus... 336 e-155
EU964132_1(EU964132|pid:none) Zea mays clone 276124 enolase mRNA... 352 e-155
(Q43130) RecName: Full=Enolase; EC=4.2.1.11; AltName: F... 355 e-155
protein update 2009. 5.25
PSORT

psg: 0.95 gvh: 0.47 alm: 0.32 top: 0.60 tms: 0.00 mit: 0.36 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

40.0 %: mitochondrial
28.0 %: cytoplasmic
16.0 %: nuclear
4.0 %: cytoskeletal
4.0 %: extracellular, including cell wall
4.0 %: peroxisomal
4.0 %: endoplasmic reticulum

>> prediction for SFG643 is mit

5' end seq. ID SFG643F
5' end seq.
>SFG643F.Seq
ACTTATTACTTTATTTTTTTTTATCTCTATCTATATATATATCATTTTTTAAAATGAGCG
TCATCAAATCAATTAAAGCCAGAGAAATTTTAGATTCACGTGGTAACCCAACTGTTGAAG
TTGACCTTTACACCGAAAAAGATGGTGTTGTTTCATCATTCAGAGCTGCAGTTCCATCAG
GTGCATCAACTGGTATTTATGAAGCTGTTGAATTAAGAGATGGTGATAAATCAAGATACT
TAGGTAAAGGTGTACTCAAAGCAATCAAAAACATTCTCGAAGTCATTCAACCAGCCGTCA
TCGGTAAATCAGTTTCCGATCAAGCTGCTATCGATAAATTAATGATCGATCTCGATGGTA
CCCCAAATAAAGGTAAATTAGGTGCCAACGCTATCCTTGCAGTCAGTTTAGCTGTTTGCA
GAGCTGGTGCTGCTGATAGAAATTTACCACTTTACAAATATATCTCAGAAATTGCAGGTA
CTAAAATGAGATTACCAGTTCCAGCATTCAATGTTATCAATGGTGGTTCACATGCAGGTA
ATAAATTAGCTATGCAAGAATTTATGATTTTACCAG----------
Length of 5' end seq. 576
3' end seq. ID SFG643Z
3' end seq.
>SFG643Z.Seq
----------GGTTCAGAAGTTTATCATAACTTAAAGAATGTCATCAGTGGTAGATACGG
TCAAGATGCTATCAATGTTGGTGATGAAGGTGGTTTCGCTCCACCAATTCAAAGCAACAA
AGAAGGTCTTGAACTCTTAAAACTTGCCATTGAAAAAGCTGGTTACACAGGTTTAGTTAA
AATTGGTATGGATTGTGCTGCCTCTGAATTCAAAGTTGAAAATGGTTACGATCTTGACTT
CAAAACTAAAAACAATGACGGTTCAGCTGTTATCTCTGGTGAAAAATTAGGTGATCCCTA
CAGAGAATTCATTAAAGAATATCCAATCATTTCAATTGAAGATCCATTTGATCAAGATGA
TTGGGAATCATACACTAAATTAACAGCATCAGTTGATATTCAAATTGTTGGTGATGATTT
ACTTGTTACCAACCCAGAAAGAATTAAGACTGGTATTGAAAAGAAAGCATGTAATGCTCT
TTTATTAAAAGTTAACCAAATTGGTTCAGTCACTGAATCAATTCGTGCCGCTCTTGACTC
AAAGAATGCATCATGGGGTGTCATGGTTAGCCATCGTTCAGGTGAAACTGAAGATACCTT
CATTGCTGATTTAGTTGTTGGTTTAGGTACTGGTCAAATTAAAACTGGTGCTCCATGTAG
ATCAGAAAGATTAGCCAAATACAATCAACTTGTTAGAATTAACGAAGAGTTAGGNAAAAC
CATAACTATGCGGTTNACTTTCCGTAAATTTNATTTACTCA
Length of 3' end seq. 751
Connected seq. ID SFG643P
Connected seq.
>SFG643P.Seq
ACTTATTACTTTATTTTTTTTTATCTCTATCTATATATATATCATTTTTTAAAATGAGCG
TCATCAAATCAATTAAAGCCAGAGAAATTTTAGATTCACGTGGTAACCCAACTGTTGAAG
TTGACCTTTACACCGAAAAAGATGGTGTTGTTTCATCATTCAGAGCTGCAGTTCCATCAG
GTGCATCAACTGGTATTTATGAAGCTGTTGAATTAAGAGATGGTGATAAATCAAGATACT
TAGGTAAAGGTGTACTCAAAGCAATCAAAAACATTCTCGAAGTCATTCAACCAGCCGTCA
TCGGTAAATCAGTTTCCGATCAAGCTGCTATCGATAAATTAATGATCGATCTCGATGGTA
CCCCAAATAAAGGTAAATTAGGTGCCAACGCTATCCTTGCAGTCAGTTTAGCTGTTTGCA
GAGCTGGTGCTGCTGATAGAAATTTACCACTTTACAAATATATCTCAGAAATTGCAGGTA
CTAAAATGAGATTACCAGTTCCAGCATTCAATGTTATCAATGGTGGTTCACATGCAGGTA
ATAAATTAGCTATGCAAGAATTTATGATTTTACCAG----------GGTTCAGAAGTTTA
TCATAACTTAAAGAATGTCATCAGTGGTAGATACGGTCAAGATGCTATCAATGTTGGTGA
TGAAGGTGGTTTCGCTCCACCAATTCAAAGCAACAAAGAAGGTCTTGAACTCTTAAAACT
TGCCATTGAAAAAGCTGGTTACACAGGTTTAGTTAAAATTGGTATGGATTGTGCTGCCTC
TGAATTCAAAGTTGAAAATGGTTACGATCTTGACTTCAAAACTAAAAACAATGACGGTTC
AGCTGTTATCTCTGGTGAAAAATTAGGTGATCCCTACAGAGAATTCATTAAAGAATATCC
AATCATTTCAATTGAAGATCCATTTGATCAAGATGATTGGGAATCATACACTAAATTAAC
AGCATCAGTTGATATTCAAATTGTTGGTGATGATTTACTTGTTACCAACCCAGAAAGAAT
TAAGACTGGTATTGAAAAGAAAGCATGTAATGCTCTTTTATTAAAAGTTAACCAAATTGG
TTCAGTCACTGAATCAATTCGTGCCGCTCTTGACTCAAAGAATGCATCATGGGGTGTCAT
GGTTAGCCATCGTTCAGGTGAAACTGAAGATACCTTCATTGCTGATTTAGTTGTTGGTTT
AGGTACTGGTCAAATTAAAACTGGTGCTCCATGTAGATCAGAAAGATTAGCCAAATACAA
TCAACTTGTTAGAATTAACGAAGAGTTAGGNAAAACCATAACTATGCGGTTNACTTTCCG
TAAATTTNATTTACTCA
Length of connected seq. 1327
Full length Seq ID -
Full length Seq. -
Length of full length seq. -