>SFF850 (SFF850Q) /CSM/SF/SFF8-C/SFF850Q.Seq.d/
XXXXXXXXXXCNCTTGCTCAAGTCATTATGTCATTGGCACCAATTTATGGTAAAGAAGAT
ACATTAACTCATCTTTTAGAATTGTTTTTACATCTCTTAAAAGATGATTTCCCAGATGTT
CGTTTAAATATCATTTCAAAATTAGATCAAGTAAGTAAAGTAATTGGTATTGAAATGTTA
TCACAATCTCTATTACCAGCTATCGTTGAATTGGCTGAAGATCATCAATGGAGAGTAAGA
TTAGCAATTATTGATTATATTCCACTTTTAGCTTCACAATTAGGTGTTGAATTCTTTGAT
GAAAAACTTGGTAATTTATGTATGACTTGGTTAGGTGATCCAGTATTTTCAATTCGTGAA
GCAGCAACTAATAATTTGAAGAAATTAACCGAAGTATTTGGAGTTGATTGGGCAAAGAAT
AATATTATTCCAAAAGTTTTATCTTTACACTCTCATCCAAACTATCTCTATCGTATGACC
ACATTATTTTCAATTTCAACCCTTTCAACTGTTGTTGGAGGTGATGTTATCTCTAGTTCA
ATGGTTCCTTTATTGGCCAAAATGGTTTCCGATAAAGTTCCAAATATTAGATTTAATGTA
GCTAAAACTTTCCAAACCATTATTCCATTACTCGATAGCACAATTGTACAATCAAGAGTC
AAACCATTACTCGTAAAACTTCATGAAGATACNATAAAGATGTTAAATTCTATGCTAGCC
AAGCACTCCAATTATG

---LAQVIMSLAPIYGKEDTLTHLLELFLHLLKDDFPDVRLNIISKLDQVSKVIGIEMLS
QSLLPAIVELAEDHQWRVRLAIIDYIPLLASQLGVEFFDEKLGNLCMTWLGDPVFSIREA
ATNNLKKLTEVFGVDWAKNNIIPKVLSLHSHPNYLYRMTTLFSISTLSTVVGGDVISSSM
VPLLAKMVSDKVPNIRFNVAKTFQTIIPLLDSTIVQSRVKPLLVKLHEDTIKMLNSMLAK
HSNY

Frame A:
---xcsshyvigtnlw*rryinssfrivftslkr*fprcsfkyhfkirssk*snwy*nvi
tisitsyr*ig*rssmeskisny*lystfsftirc*il**ktw*fmydlvr*ssifns*s
sn**feeinrsiws*lgke*yysksfiftlssklslsydhiifnfnpfnccwr*cyl*fn
gsfigqngfr*ssky*i*cs*nfpnhysitr*hnctiksqtitrkts*ryxkdvkfyasq
alql


Frame B:
---LAQVIMSLAPIYGKEDTLTHLLELFLHLLKDDFPDVRLNIISKLDQVSKVIGIEMLS
QSLLPAIVELAEDHQWRVRLAIIDYIPLLASQLGVEFFDEKLGNLCMTWLGDPVFSIREA
ATNNLKKLTEVFGVDWAKNNIIPKVLSLHSHPNYLYRMTTLFSISTLSTVVGGDVISSSM
VPLLAKMVSDKVPNIRFNVAKTFQTIIPLLDSTIVQSRVKPLLVKLHEDTIKMLNSMLAK
HSNY


Frame C:
---llkslchwhqfmvkkih*lif*ncfyis*kmisqmfv*isfqn*ik*vk*lvlkcyh
nlyyqlslnwlkiinge*d*qlliifhf*lhn*vlnslmknlviyv*lg*viqyfqfvkq
qlii*rn*pkyleligqriilfqkfylytliqtisiv*phyfqfqpfqlllevmlslvqw
flywpkwfpikfqildlm*lklskplfhysiaqlynqesnhys*nfmkix*rc*ilc*ps
tpim

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SFF891 (SFF891Q) /CSM/SF/SFF8-D/SFF891Q.Seq.d/                       1429   0.0
SFF850 (SFF850Q) /CSM/SF/SFF8-C/SFF850Q.Seq.d/                       1429   0.0
SFD371 (SFD371Q) /CSM/SF/SFD3-C/SFD371Q.Seq.d/                       1411   0.0
AFL883 (AFL883Q) /CSM/AF/AFL8-D/AFL883Q.Seq.d/                       1403   0.0
SFJ287 (SFJ287Q) /CSM/SF/SFJ2-D/SFJ287Q.Seq.d/                       1398   0.0
SFJ265 (SFJ265Q) /CSM/SF/SFJ2-C/SFJ265Q.Seq.d/                       1390   0.0
CFC574 (CFC574Q) /CSM/CF/CFC5-D/CFC574Q.Seq.d/                       1386   0.0
VHB858 (VHB858Q) /CSM/VH/VHB8-C/VHB858Q.Seq.d/                       1384   0.0
AFK893 (AFK893Q) /CSM/AF/AFK8-D/AFK893Q.Seq.d/                       1382   0.0
AFN841 (AFN841Q) /CSM/AF/AFN8-B/AFN841Q.Seq.d/                       1380   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

U61987|U61987.1 Dictyostelium discoideum phosphoprotein phosphatase A (pppA) mRNA, complete cds.  1332   0.0    2
AL428358|AL428358.1 clone BA0AB025C09 of library BA0AB from strain CLIB 210 of  Kluyveromyces lactis.    48   3e-12  3
BU276111|BU276111.1 Cr_Emb_06C12_TEXF1 Convoluta roscoffensis embryos from Eva Jiminez Convoluta roscoffensis cDNA clone Cr_Emb_06C12 5' similar to Q23922 PHOSPHOPROTEIN PHOSPHATASE A. Dictyostelium discoideum, mRNA sequence.    58   3e-10  4
BI516804|BI516804.1 BB160023B10E05 Bee Brain Normalized Library, BB16 Apis mellifera cDNA clone BB160023B10E05 5', mRNA sequence.    44   2e-07  3
AX829534|AX829534.1 Sequence 254 from Patent WO03072602.           44   3e-04  2
AX818504|AX818504.1 Sequence 254 from Patent EP1338608.            44   3e-04  2
AX596522|AX596522.1 Sequence 2176 from Patent EP1258494.           44   3e-04  2
M98389|M98389.1 Yeast protein phosphatase regulatory subunit...    44   6e-04  2
AJ131045|AJ131045.1 Cicer arietinum mRNA for protein phosphatase.    54   0.003  1
L05146|L05146.2 Saccharomyces cerevisiae chromosome I left arm sequence.    44   0.004  2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U61987_1(U61987|pid:none) Dictyostelium discoideum phosphoprotei...   395   e-110
AM920433_216(AM920433|pid:none) Penicillium chrysogenum Wisconsi...   269   7e-71
AJ131045_1(AJ131045|pid:none) Cicer arietinum mRNA for protein p...   266   2e-70
AF196287_1(AF196287|pid:none) Medicago sativa subsp. x varia Ser...   263   2e-69
EU965946_1(EU965946|pid:none) Zea mays clone 290216 serine/threo...   263   5e-69
AJ243828_1(AJ243828|pid:none) Oryza sativa mRNA for protein phos...   262   7e-69
AM270402_10(AM270402|pid:none) Aspergillus niger contig An18c010...   262   7e-69
T03684(T03684) phosphoprotein phosphatase (EC 3.1.3.16) 2A regul...   260   2e-68
S51809(S51809) phosphoprotein phosphatase 2A 65K regulatory chai...   260   3e-68
(Q38951) RecName: Full=Serine/threonine-protein phosphatase 2A 6...   260   3e-68

 psg: 0.93  gvh: 0.66  alm: 0.39  top: 0.40  tms: 0.00  mit: 0.17  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: extracellular, including cell wall
	 16.0 %: cytoplasmic
	 12.0 %: mitochondrial
	 12.0 %: nuclear
	  8.0 %: vacuolar
	  8.0 %: endoplasmic reticulum
	  4.0 %: peroxisomal

>> prediction for SFF850 is exc

>SFF850Z.Seq
----------CNCTTGCTCAAGTCATTATGTCATTGGCACCAATTTATGGTAAAGAAGAT
ACATTAACTCATCTTTTAGAATTGTTTTTACATCTCTTAAAAGATGATTTCCCAGATGTT
CGTTTAAATATCATTTCAAAATTAGATCAAGTAAGTAAAGTAATTGGTATTGAAATGTTA
TCACAATCTCTATTACCAGCTATCGTTGAATTGGCTGAAGATCATCAATGGAGAGTAAGA
TTAGCAATTATTGATTATATTCCACTTTTAGCTTCACAATTAGGTGTTGAATTCTTTGAT
GAAAAACTTGGTAATTTATGTATGACTTGGTTAGGTGATCCAGTATTTTCAATTCGTGAA
GCAGCAACTAATAATTTGAAGAAATTAACCGAAGTATTTGGAGTTGATTGGGCAAAGAAT
AATATTATTCCAAAAGTTTTATCTTTACACTCTCATCCAAACTATCTCTATCGTATGACC
ACATTATTTTCAATTTCAACCCTTTCAACTGTTGTTGGAGGTGATGTTATCTCTAGTTCA
ATGGTTCCTTTATTGGCCAAAATGGTTTCCGATAAAGTTCCAAATATTAGATTTAATGTA
GCTAAAACTTTCCAAACCATTATTCCATTACTCGATAGCACAATTGTACAATCAAGAGTC
AAACCATTACTCGTAAAACTTCATGAAGATACNATAAAGATGTTAAATTCTATGCTAGCC
AAGCACTCCAATTATG