>SFF253 (SFF253Q) /CSM/SF/SFF2-C/SFF253Q.Seq.d/
XXXXXXXXXXAGATTTGGTCACACAAAGACTATCCATTAATTCAAATTGGTCGTATGGTT
TTGAATCGTAATCCAGAGAATTACTTTGCTGAAGTTGAACAAGCTGCCTTCTCACCATCC
CACATGGTTCCAGGTATTGAACCATCACCAGATAAGATGTTACAAGGTCGTCTCTTCTCT
TATCCAGATACTCATCGTCATCGTTTAGGTGTAAACTATCAACAAATCCCAGTCAATTGT
CCATTCGCCGTAAAGGGTGGTGTTAAAAACTACCAACGTGATGGTTTCATGGCTGTCAAT
GGTAATGGTGGTAAAGGTCCAAACTATCAACCAAACTCTTTCGGTGGTCCAGAGCCACAT
CCAGAATTTGCTCAACATAAATTTGACGTCTCTGGTTTCGCTGCTCGTCAACCATACAAT
CATCCAAATGACGACTTTGTTCAACCAGGTGATTTATATAGACTCATGTCTGAAGATGCC
AAATCTCGTTTCGTCTCTAATTTAGTCGGTCACATGTCCGGTGTCACCATCAAAGAAATT
CAAGTTCGNGCCGTTTCAAACTTTTACAAGGCTGACAAAGATTCTAGGTGCTCGTTTATG
TAAGGGTC

---IWSHKDYPLIQIGRMVLNRNPENYFAEVEQAAFSPSHMVPGIEPSPDKMLQGRLFSY
PDTHRHRLGVNYQQIPVNCPFAVKGGVKNYQRDGFMAVNGNGGKGPNYQPNSFGGPEPHP
EFAQHKFDVSGFAARQPYNHPNDDFVQPGDLYRLMSEDAKSRFVSNLVGHMSGVTIKEIQ
VRAVSNFYKADKDSRCSFM*g

Frame A:
---dlvtqrlsinsnwsygfes*srellc*s*tsclltiphgsry*titr*dvtrsslll
sryssssfrcklstnpsqlsirrkgwc*klpt*wfhgcqw*ww*rsklstklfrwsrats
ricst*i*rlwfrcsstiqssk*rlcstr*fi*thv*rcqisfrl*fsrshvrchhqrns
ssxrfkllqg*qrf*vlvyvrv


Frame B:
---IWSHKDYPLIQIGRMVLNRNPENYFAEVEQAAFSPSHMVPGIEPSPDKMLQGRLFSY
PDTHRHRLGVNYQQIPVNCPFAVKGGVKNYQRDGFMAVNGNGGKGPNYQPNSFGGPEPHP
EFAQHKFDVSGFAARQPYNHPNDDFVQPGDLYRLMSEDAKSRFVSNLVGHMSGVTIKEIQ
VRAVSNFYKADKDSRCSFM*g


Frame C:
---fghtktih*fklvvwf*iviqritllklnklpshhptwfqvlnhhqircykvvssli
qiliviv*v*tinksqsivhsp*rvvlkttnvmvswlsmvmvvkvqtinqtlsvvqshiq
nllninltslvsllvnhtiiqmttlfnqviyidsclkmpnlvssli*svtcpvspskkfk
fxpfqtftrltkilgarlckg

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SFF253 (SFF253Q) /CSM/SF/SFF2-C/SFF253Q.Seq.d/                       1179   0.0
VFM644 (VFM644Q) /CSM/VF/VFM6-B/VFM644Q.Seq.d/                       1164   0.0
VFM191 (VFM191Q) /CSM/VF/VFM1-D/VFM191Q.Seq.d/                       1164   0.0
VFK159 (VFK159Q) /CSM/VF/VFK1-C/VFK159Q.Seq.d/                       1164   0.0
VFB123 (VFB123Q) /CSM/VF/VFB1-A/VFB123Q.Seq.d/                       1164   0.0
SFL238 (SFL238Q) /CSM/SF/SFL2-B/SFL238Q.Seq.d/                       1164   0.0
SFK640 (SFK640Q) /CSM/SF/SFK6-B/SFK640Q.Seq.d/                       1164   0.0
SFJ685 (SFJ685Q) /CSM/SF/SFJ6-D/SFJ685Q.Seq.d/                       1164   0.0
SFJ415 (SFJ415Q) /CSM/SF/SFJ4-A/SFJ415Q.Seq.d/                       1164   0.0
SFI642 (SFI642Q) /CSM/SF/SFI6-B/SFI642Q.Seq.d/                       1164   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AF090443|AF090443.1 Dictyostelium discoideum catalase (cat) mRNA, complete cds.  1130   0.0    2
AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 map 2234041-2567370 strain AX4, complete sequence.  1130   0.0    2
AJ400965|AJ400965.1 Proteus mirabilis ORF1 DNA, katA gene and menE gene, strain PR.    76   8e-17  2
AJ400964|AJ400964.1 Proteus mirabilis ORF1 DNA, katA gene and menE gene, wild type.    76   8e-17  2
AB064338|AB064338.1 Candida boidinii CTA1 gene for peroxisomal catalase, complete cds.    82   8e-17  2
BX554380|BX554380.1 Glossina morsitans morsitans (Tseatse fly) EST from adult infected  midgut library, clone Tse15b01_q1c.    74   2e-09  1
BX554266|BX554266.1 Glossina morsitans morsitans (Tseatse fly) EST from adult infected  midgut library, clone Tse14d06_q1c.    74   2e-09  1
BX564920|BX564920.1 Glossina morsitans morsitans (Tseatse fly) EST from adult infected  midgut library, clone Tse74e09_q1c.    74   2e-09  1
U40704|U40704.1 Candida albicans catalase (Cat) gene, complete cds.    72   1e-08  1
BX554333|BX554333.1 Glossina morsitans morsitans (Tseatse fly) EST from adult infected  midgut library, clone Tse14g12_q1c.    72   1e-08  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF090443_1(AF090443|pid:none) Dictyostelium discoideum catalase ...   404   e-112
CP000300_481(CP000300|pid:none) Methanococcoides burtonii DSM 62...   233   2e-60
CQ796333_1(CQ796333|pid:none) Sequence 109 from Patent WO2004027...   233   3e-60
AE017333_3935(AE017333|pid:none) Bacillus licheniformis DSM 13, ...   233   3e-60
(O93662) RecName: Full=Catalase;          EC=1.11.1.6;  &AJ00593...   229   3e-59
CP000560_826(CP000560|pid:none) Bacillus amyloliquefaciens FZB42...   229   3e-59
AY378080_1(AY378080|pid:none) Tetrahymena thermophila putative c...   224   1e-57
AL009126_914(AL009126|pid:none) Bacillus subtilis subsp. subtili...   219   3e-56
(P26901) RecName: Full=Vegetative catalase;          EC=1.11.1.6...   219   5e-56
(Q9PWF7) RecName: Full=Catalase;          EC=1.11.1.6;  &AB03187...   218   8e-56

 psg: 0.68  gvh: 0.45  alm: 0.48  top: 0.53  tms: 0.00  mit: 0.25  mip: 0.10
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: cytoplasmic
	 32.0 %: mitochondrial
	 16.0 %: nuclear
	  8.0 %: cytoskeletal

>> prediction for SFF253 is cyt

>SFF253Z.Seq
----------AGATTTGGTCACACAAAGACTATCCATTAATTCAAATTGGTCGTATGGTT
TTGAATCGTAATCCAGAGAATTACTTTGCTGAAGTTGAACAAGCTGCCTTCTCACCATCC
CACATGGTTCCAGGTATTGAACCATCACCAGATAAGATGTTACAAGGTCGTCTCTTCTCT
TATCCAGATACTCATCGTCATCGTTTAGGTGTAAACTATCAACAAATCCCAGTCAATTGT
CCATTCGCCGTAAAGGGTGGTGTTAAAAACTACCAACGTGATGGTTTCATGGCTGTCAAT
GGTAATGGTGGTAAAGGTCCAAACTATCAACCAAACTCTTTCGGTGGTCCAGAGCCACAT
CCAGAATTTGCTCAACATAAATTTGACGTCTCTGGTTTCGCTGCTCGTCAACCATACAAT
CATCCAAATGACGACTTTGTTCAACCAGGTGATTTATATAGACTCATGTCTGAAGATGCC
AAATCTCGTTTCGTCTCTAATTTAGTCGGTCACATGTCCGGTGTCACCATCAAAGAAATT
CAAGTTCGNGCCGTTTCAAACTTTTACAAGGCTGACAAAGATTCTAGGTGCTCGTTTATG
TAAGGGTC