>SFF231 (SFF231Q) /CSM/SF/SFF2-B/SFF231Q.Seq.d/
XXXXXXXXXXAGACTATCCATTAATTCAAATTGGTCGTATGGTTTTGAATCGTAATCCAG
AGAATTACTTTGCTGAAGTTGAACAAAGCTGCNTTCTCACCATCCCACATGGTTCCAGGT
ATTGAACCATCACCAGATAAGATGTTACAAGGTCGTCTCTTCTCTTATCCAGATACTCAT
CGTCATCGTTTAGGTGTAAACTATCAACAAATCCCAGTCAATTGTCCATTCGCCGTAAAG
GGTGGTGTTAAAAACTACCAACGTGATGGTTTCATGGCTGTCAATGGTAATGGTGGTAAA
GGTCCAAACTATCAACCAAACTCTTTCGGTGGTCCAGAGCCACATCCAGAATTTGCTCAA
CATAAATTTGACGTCTCTGGTTTCGCTGCTCGTCAACCATACAATCATCCAAATGACGAC
TTTGTTCAACCAGGTGATTTATATAGACTCATGTCTGAAGATGCCAAATCTCGTTTCGTC
TCTAATTTAGTCGGTCACATGTCCGGTGTCACCATCAAAGAAATTCAAGTTCGTGCCGTT
TCAAACTTTTACAAGGCTGACAAAGATTTAGGTGCTCGTTTATGTAAGGGTCTGGTATNA
TGTTAATATGTCATCAAATTCGCNCTAGATCAAACTGTAATCAAT

---tih*fklvvwf*IVIQRITLLKLNKAAFSPSHMVPGIEPSPDKMLQGRLFSYPDTHR
HRLGVNYQQIPVNCPFAVKGGVKNYQRDGFMAVNGNGGKGPNYQPNSFGGPEPHPEFAQH
KFDVSGFAARQPYNHPNDDFVQPGDLYRLMSEDAKSRFVSNLVGHMSGVTIKEIQVRAVS
NFYKADKDLGARLCKGLVXC*yvikfaldqtvin

Frame A:
---dypliqigrmvlnrnpenyfaeveqscxltiphgsry*titr*dvtrsslllsryss
ssfrcklstnpsqlsirrkgwc*klpt*wfhgcqw*ww*rsklstklfrwsratsricst
*i*rlwfrcsstiqssk*rlcstr*fi*thv*rcqisfrl*fsrshvrchhqrnssscrf
kllqg*qrfrcsfm*gsgxmlichqirxrsncnq


Frame B:
---tih*fklvvwf*IVIQRITLLKLNKAAFSPSHMVPGIEPSPDKMLQGRLFSYPDTHR
HRLGVNYQQIPVNCPFAVKGGVKNYQRDGFMAVNGNGGKGPNYQPNSFGGPEPHPEFAQH
KFDVSGFAARQPYNHPNDDFVQPGDLYRLMSEDAKSRFVSNLVGHMSGVTIKEIQVRAVS
NFYKADKDLGARLCKGLVXC*yvikfaldqtvin


Frame C:
---lsinsnwsygfes*srellc*s*tklxshhptwfqvlnhhqircykvvssliqiliv
iv*v*tinksqsivhsp*rvvlkttnvmvswlsmvmvvkvqtinqtlsvvqshiqnllni
nltslvsllvnhtiiqmttlfnqviyidsclkmpnlvssli*svtcpvspskkfkfvpfq
tftrltki*vlvyvrvwyxvnmssnsx*ikl*s

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SFF231 (SFF231Q) /CSM/SF/SFF2-B/SFF231Q.Seq.d/                       1241   0.0
AFB729 (AFB729Q) /CSM/AF/AFB7-B/AFB729Q.Seq.d/                       1205   0.0
AFK218 (AFK218Q) /CSM/AF/AFK2-A/AFK218Q.Seq.d/                       1187   0.0
SFL238 (SFL238Q) /CSM/SF/SFL2-B/SFL238Q.Seq.d/                       1183   0.0
AFG448 (AFG448Q) /CSM/AF/AFG4-B/AFG448Q.Seq.d/                       1183   0.0
AFD822 (AFD822Q) /CSM/AF/AFD8-A/AFD822Q.Seq.d/                       1183   0.0
CFA669 (CFA669Q) /CSM/CF/CFA6-C/CFA669Q.Seq.d/                       1178   0.0
AFO414 (AFO414Q) /CSM/AF/AFO4-A/AFO414Q.Seq.d/                       1176   0.0
VFJ551 (VFJ551Q) /CSM/VF/VFJ5-C/VFJ551Q.Seq.d/                       1174   0.0
CFI634 (CFI634Q) /CSM/CF/CFI6-B/CFI634Q.Seq.d/                       1174   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AF090443|AF090443.1 Dictyostelium discoideum catalase (cat) mRNA, complete cds.  1001   0.0    3
AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 map 2234041-2567370 strain AX4, complete sequence.  1001   0.0    3
AB064338|AB064338.1 Candida boidinii CTA1 gene for peroxisomal catalase, complete cds.    48   1e-13  3
AJ400965|AJ400965.1 Proteus mirabilis ORF1 DNA, katA gene and menE gene, strain PR.    76   1e-11  2
AJ400964|AJ400964.1 Proteus mirabilis ORF1 DNA, katA gene and menE gene, wild type.    76   1e-11  2
BX564920|BX564920.1 Glossina morsitans morsitans (Tseatse fly) EST from adult infected  midgut library, clone Tse74e09_q1c.    74   3e-09  1
BX554380|BX554380.1 Glossina morsitans morsitans (Tseatse fly) EST from adult infected  midgut library, clone Tse15b01_q1c.    74   3e-09  1
BX554266|BX554266.1 Glossina morsitans morsitans (Tseatse fly) EST from adult infected  midgut library, clone Tse14d06_q1c.    74   3e-09  1
BX554333|BX554333.1 Glossina morsitans morsitans (Tseatse fly) EST from adult infected  midgut library, clone Tse14g12_q1c.    72   1e-08  1
AV405682|AV405682.1 Bombyx mori cDNA clone:wdV30109.               54   1e-08  2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF090443_1(AF090443|pid:none) Dictyostelium discoideum catalase ...   362   e-109
CP000300_481(CP000300|pid:none) Methanococcoides burtonii DSM 62...   192   5e-56
(O93662) RecName: Full=Catalase;          EC=1.11.1.6;  &AJ00593...   194   2e-55
CQ796333_1(CQ796333|pid:none) Sequence 109 from Patent WO2004027...   184   2e-55
AE017333_3935(AE017333|pid:none) Bacillus licheniformis DSM 13, ...   184   2e-55
CP000560_826(CP000560|pid:none) Bacillus amyloliquefaciens FZB42...   181   3e-54
AY378080_1(AY378080|pid:none) Tetrahymena thermophila putative c...   178   3e-52
AL009126_914(AL009126|pid:none) Bacillus subtilis subsp. subtili...   172   3e-51
(P26901) RecName: Full=Vegetative catalase;          EC=1.11.1.6...   172   4e-51
(Q9PWF7) RecName: Full=Catalase;          EC=1.11.1.6;  &AB03187...   169   7e-49

 psg: 0.72  gvh: 0.45  alm: 0.47  top: 0.53  tms: 0.00  mit: 0.37  mip: 0.07
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 32.0 %: mitochondrial
	 28.0 %: nuclear
	 24.0 %: cytoplasmic
	  4.0 %: cytoskeletal
	  4.0 %: vacuolar
	  4.0 %: plasma membrane
	  4.0 %: peroxisomal

>> prediction for SFF231 is mit

>SFF231Z.Seq
----------AGACTATCCATTAATTCAAATTGGTCGTATGGTTTTGAATCGTAATCCAG
AGAATTACTTTGCTGAAGTTGAACAAAGCTGCNTTCTCACCATCCCACATGGTTCCAGGT
ATTGAACCATCACCAGATAAGATGTTACAAGGTCGTCTCTTCTCTTATCCAGATACTCAT
CGTCATCGTTTAGGTGTAAACTATCAACAAATCCCAGTCAATTGTCCATTCGCCGTAAAG
GGTGGTGTTAAAAACTACCAACGTGATGGTTTCATGGCTGTCAATGGTAATGGTGGTAAA
GGTCCAAACTATCAACCAAACTCTTTCGGTGGTCCAGAGCCACATCCAGAATTTGCTCAA
CATAAATTTGACGTCTCTGGTTTCGCTGCTCGTCAACCATACAATCATCCAAATGACGAC
TTTGTTCAACCAGGTGATTTATATAGACTCATGTCTGAAGATGCCAAATCTCGTTTCGTC
TCTAATTTAGTCGGTCACATGTCCGGTGTCACCATCAAAGAAATTCAAGTTCGTGCCGTT
TCAAACTTTTACAAGGCTGACAAAGATTTAGGTGCTCGTTTATGTAAGGGTCTGGTATNA
TGTTAATATGTCATCAAATTCGCNCTAGATCAAACTGTAATCAAT