>SFF191 (SFF191Q) /CSM/SF/SFF1-D/SFF191Q.Seq.d/
XXXXXXXXXXTTAACCNANGATACCAAAGAAGCCGCTGACCACGCCTCTGAAGCCGTTAA
AGATGCTGCTGACAATCTAAANATAAAGTTCAAAAGAAAGGTAGAGGTGACCAAAGAAAC
ATT

---TXDTKEAADHASEAVKDAADNLXIKFKRKVEVTKET

Frame A:
---*pxipkkplttplkplkmllti*x*ssker*r*pkkh


Frame B:
---nxxyqrsr*prl*sr*rcc*qskxkvqkkgrgdqrni


Frame C:
---TXDTKEAADHASEAVKDAADNLXIKFKRKVEVTKET

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SFF191 (SFF191Q) /CSM/SF/SFF1-D/SFF191Q.Seq.d/                        206   5e-53
SFF161 (SFF161Q) /CSM/SF/SFF1-C/SFF161Q.Seq.d/                        192   8e-49
SFG579 (SFG579Q) /CSM/SF/SFG5-D/SFG579Q.Seq.d/                        184   2e-46
CFA584 (CFA584Q) /CSM/CF/CFA5-D/CFA584Q.Seq.d/                        178   1e-44
SSL444 (SSL444Q) /CSM/SS/SSL4-B/SSL444Q.Seq.d/                        170   3e-42
SSJ331 (SSJ331Q) /CSM/SS/SSJ3-B/SSJ331Q.Seq.d/                        170   3e-42
SSD309 (SSD309Q) /CSM/SS/SSD3-A/SSD309Q.Seq.d/                        170   3e-42
SLK847 (SLK847Q) /CSM/SL/SLK8-B/SLK847Q.Seq.d/                        170   3e-42
SLK586 (SLK586Q) /CSM/SL/SLK5-D/SLK586Q.Seq.d/                        170   3e-42
SLJ345 (SLJ345Q) /CSM/SL/SLJ3-B/SLJ345Q.Seq.d/                        170   3e-42

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AY044086|AY044086.1 Dictyostelium discoideum Rho GDP-dissociation inhibitor-like protein (rdiB) gene, complete cds; and unknown gene.   121   1e-37  3
AC091550|AC091550.1 Homo sapiens chromosome 18 clone RP11-407C18 map 18, LOW-PASS SEQUENCE SAMPLING.    36   0.17   2
CG451188|CG451188.1 OGVHY55TH ZM_0.7_1.5_KB Zea mays genomic clone ZMMBMa0487J13, genomic survey sequence.    44   0.38   1
CG055621|CG055621.1 PUFPY94TB ZM_0.6_1.0_KB Zea mays genomic clone ZMMBTa0706P19, genomic survey sequence.    44   0.38   1
BZ325316|BZ325316.1 ic51e08.g1 WGS-ZmaysF (JM107 adapted methyl filtered) Zea mays genomic clone ic51e08 5', DNA sequence.    44   0.38   1
BH134670|BH134670.1 ENTOP40TR Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    42   1.5    1
AZ545420|AZ545420.1 ENTDG15TR Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    42   1.5    1
AZ670282|AZ670282.1 ENTMN84TF Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    42   1.5    1
AZ530975|AZ530975.1 ENTCR19TR Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    42   1.5    1
AZ678163|AZ678163.1 ENTKA17TF Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    42   1.5    1

 ***** No hits found ******

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3101297
Number of Hits to DB: 80,496,263

 psg: 0.75  gvh: 0.18  alm: 0.64  top: 0.53  tms: 0.00  mit: 0.19  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: nuclear
	 36.0 %: cytoplasmic
	 16.0 %: cytoskeletal
	  8.0 %: mitochondrial

>> prediction for SFF191 is nuc

>SFF191Z.Seq
----------TTAACCNANGATACCAAAGAAGCCGCTGACCACGCCTCTGAAGCCGTTAA
AGATGCTGCTGACAATCTAAANATAAAGTTCAAAAGAAAGGTAGAGGTGACCAAAGAAAC
ATT