>SFF105 (SFF105Q) /CSM/SF/SFF1-A/SFF105Q.Seq.d/
XXXXXXXXXXAAGAGATATAGAAAATTTGTTAAATGGAAATTGGGGTCTTTATGATAATG
NTGATTTAGTAAATGCAGCATTACATATGGTTANAATGGGATTAGCTGATAAAGATAAAA
TGTTTATTGATGGTGGAAGTGCTGGTGGGTTGGCAACATTAGGTAGTTNAACATTTTATG
ATATTTTCAAAGGTGGTTGTTCCTATTATGGNGTGGCAGATTTAGAA

---RDIENLLNGNWGLYDNXDLVNAALHMVXMGLADKDKMFIDGGSAGGLATLGSXTFYD
IFKGGCSYYGVADLE

Frame A:
---RDIENLLNGNWGLYDNXDLVNAALHMVXMGLADKDKMFIDGGSAGGLATLGSXTFYD
IFKGGCSYYGVADLE


Frame B:
---ei*kic*meigvfmimxi**mqhyiwlxwd*likikcllmvevlvgwqh*vvxhfmi
fskvvvpimxwqi*


Frame C:
---ryrkfvkwklgsl**x*fskcsitygxngis**r*nvy*wwkcwwvgnir*xnil*y
fqrwlfllwxgrfr

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SFF105 (SFF105Q) /CSM/SF/SFF1-A/SFF105Q.Seq.d/                        406   e-113
VHK527 (VHK527Q) /CSM/VH/VHK5-B/VHK527Q.Seq.d/                        375   e-103
VSH465 (VSH465Q) /CSM/VS/VSH4-C/VSH465Q.Seq.d/                         38   0.054
VSF853 (VSF853Q) /CSM/VS/VSF8-C/VSF853Q.Seq.d/                         38   0.054
VSF618 (VSF618Q) /CSM/VS/VSF6-A/VSF618Q.Seq.d/                         38   0.054
VFM739 (VFM739Q) /CSM/VF/VFM7-B/VFM739Q.Seq.d/                         38   0.054
VFL450 (VFL450Q) /CSM/VF/VFL4-C/VFL450Q.Seq.d/                         38   0.054
VFC358 (VFC358Q) /CSM/VF/VFC3-C/VFC358Q.Seq.d/                         38   0.054
AFO845 (AFO845Q) /CSM/AF/AFO8-B/AFO845Q.Seq.d/                         38   0.054
AFN309 (AFN309Q) /CSM/AF/AFN3-A/AFN309Q.Seq.d/                         38   0.054

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC083982|AC083982.13 Homo sapiens chromosome 8, clone RP11-520P18, complete sequence.    38   0.10   2
AC103092|AC103092.5 Rattus norvegicus clone CH230-55N2, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces.    44   0.18   4
AC139825|AC139825.1 Homo sapiens chromosome 16 clone RP11-371L16, WORKING DRAFT SEQUENCE, 25 unordered pieces.    38   0.19   3
AL355352|AL355352.16 Human DNA sequence *** SEQUENCING IN PROGRESS *** from clone  RP11-67K21.    46   0.20   1
AL365179|AL365179.30 Human DNA sequence from clone RP13-34C21 on chromosome Xq24-25.    36   0.43   3
AJ250645|AJ250645.1 Platychirograpsus spectabilis partial mitochondrial 16S rRNA gene,  isolate TB1.    44   0.77   1
AC123375|AC123375.4 Rattus norvegicus clone CH230-278K12, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces.    44   0.77   1
AC136130|AC136130.3 Rattus norvegicus clone CH230-67B4, *** SEQUENCING IN PROGRESS ***, 1 ordered piece.    44   0.77   1
AC129379|AC129379.4 Rattus norvegicus clone CH230-194D2, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces.    44   0.77   1
CF971786|CF971786.1 AUB_IfLvr00258 Ictalurus furcatus liver cDNA library Ictalurus furcatus cDNA 5', mRNA sequence.    44   0.77   1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CP000951_2692(CP000951|pid:none) Synechococcus sp. PCC 7002, com...    64   2e-09
BA000022_2539(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA,...    60   3e-08
AP009552_2459(AP009552|pid:none) Microcystis aeruginosa NIES-843...    60   3e-08
AM778899_20(AM778899|pid:none) Microcystis aeruginosa PCC 7806 g...    59   7e-08
CP001287_696(CP001287|pid:none) Cyanothece sp. PCC 8801, complet...    58   9e-08
CP001020_1557(CP001020|pid:none) Coxiella burnetii CbuK_Q154, co...    56   4e-07
CP001019_446(CP001019|pid:none) Coxiella burnetii CbuG_Q212, com...    56   4e-07
CP000127_1104(CP000127|pid:none) Nitrosococcus oceani ATCC 19707...    54   2e-06
CP000804_2946(CP000804|pid:none) Roseiflexus castenholzii DSM 13...    54   2e-06
CP001291_1306(CP001291|pid:none) Cyanothece sp. PCC 7424, comple...    53   3e-06

 psg: 0.75  gvh: 0.45  alm: 0.47  top: 0.53  tms: 0.00  mit: 0.24  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: cytoplasmic
	 24.0 %: nuclear
	 12.0 %: cytoskeletal
	  8.0 %: mitochondrial
	  4.0 %: vacuolar
	  4.0 %: endoplasmic reticulum

>> prediction for SFF105 is cyt

>SFF105Z.Seq
----------AAGAGATATAGAAAATTTGTTAAATGGAAATTGGGGTCTTTATGATAATG
NTGATTTAGTAAATGCAGCATTACATATGGTTANAATGGGATTAGCTGATAAAGATAAAA
TGTTTATTGATGGTGGAAGTGCTGGTGGGTTGGCAACATTAGGTAGTTNAACATTTTATG
ATATTTTCAAAGGTGGTTGTTCCTATTATGGNGTGGCAGATTTAGAA