>SFF103 (SFF103Q) /CSM/SF/SFF1-A/SFF103Q.Seq.d/
XXXXXXXXXXGATAGGGGTAGTTTTTAGTTTTTGAAAATTATCATCACTCTATTGGCTTA
TAAAATTATTTGTACCCCAAATCATATGCATTTGACAAGGGGTAACCATGAGACAACCGA
TATGAATCGTTTCTATGGTTTCCAAGGCGAAGTGGTTGCAAAATACAGTGAGATGGTATT
CGATCTATTCTCAGAGTTGTTCAATTGGTTCCCATTGGCATTCGTGTTGGATGAATCGTT
TATGGTGGTACATGGTGGTTTGTTTGGTAAGGATGGTGTCACACTTGACGATATTAGAAA
GATTAAACGTAATGCACCAGATCCAAAAGATAATGAATTGGTTCAATGCTTACTTTGGTC
TGATCCTCAATCAAATCCTGGTATTGCTCCTTCTTCAAGAGGTGTAGGTGTTTACTTTGG
ACCTGATGTCACCAGACGTTTCCTCAAGGAAAATAATCTATCAACTATCATTAGATCTCA
TGAAGTTAAAGAAAAAGGTTATCAAATCGATGATGATGGTTCTCTCATCACTGTTTTCTC
TGCTCCAAATTATTGTGATCAATCTGGTAATCTTGGCTCATTTATAAATATAACNAAGAT
AAAATTAAAATTACAACTTTNAAGCTGTNAACATCCGAATNACCACCAATGCATAGCCAA
AAAAA

---rgsf*FLKIIITLLAYKIICTPNHMHLTRGNHETTDMNRFYGFQGEVVAKYSEMVFD
LFSELFNWFPLAFVLDESFMVVHGGLFGKDGVTLDDIRKIKRNAPDPKDNELVQCLLWSD
PQSNPGIAPSSRGVGVYFGPDVTRRFLKENNLSTIIRSHEVKEKGYQIDDDGSLITVFSA
PNYCDQSGNLGSFINITKIKLKLQLXSCXHPNXHQCIAKK

Frame A:
---igvvfsf*klsslywliklfvpqiici*qgvtmrqpi*ivsmvskakwlqntvrwys
iysqscsigshwhscwmnrlwwymvvclvrmvshltilerlnvmhqiqkimnwfnayfgl
ilnqilvllllqev*vftldlmspdvssrkiiyqlsldlmklkkkviksmmmvlsslfsl
lqiivinlvilahl*i*xr*n*nynfxavnirxttna*pkk


Frame B:
---*g*flvfenyhhsigl*nylypksyafdkg*p*dnryesflwfprrsgckiq*dgir
silrvvqlvpigirvg*ivyggtwwfvw*gwcht*ry*kd*t*ctrskr**igsmltlv*
ssikswycsffkrcrcllwt*chqtfpqgk*sinyh*is*s*rkrlsnr**wfshhcflc
skll*siw*swliykynxdkikittxklxtsexppmhsqk


Frame C:
---rgsf*FLKIIITLLAYKIICTPNHMHLTRGNHETTDMNRFYGFQGEVVAKYSEMVFD
LFSELFNWFPLAFVLDESFMVVHGGLFGKDGVTLDDIRKIKRNAPDPKDNELVQCLLWSD
PQSNPGIAPSSRGVGVYFGPDVTRRFLKENNLSTIIRSHEVKEKGYQIDDDGSLITVFSA
PNYCDQSGNLGSFINITKIKLKLQLXSCXHPNXHQCIAKK

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SFF103 (SFF103Q) /CSM/SF/SFF1-A/SFF103Q.Seq.d/                       1261   0.0
VFF543 (VFF543Q) /CSM/VF/VFF5-B/VFF543Q.Seq.d/                       1152   0.0
CFG219 (CFG219Q) /CSM/CF/CFG2-A/CFG219Q.Seq.d/                       1136   0.0
VFI734 (VFI734Q) /CSM/VF/VFI7-B/VFI734Q.Seq.d/                       1132   0.0
VFF491 (VFF491Q) /CSM/VF/VFF4-D/VFF491Q.Seq.d/                       1132   0.0
VFK254 (VFK254Q) /CSM/VF/VFK2-C/VFK254Q.Seq.d/                       1128   0.0
SFG624 (SFG624Q) /CSM/SF/SFG6-A/SFG624Q.Seq.d/                       1124   0.0
AFO461 (AFO461Q) /CSM/AF/AFO4-C/AFO461Q.Seq.d/                       1124   0.0
AFL662 (AFL662Q) /CSM/AF/AFL6-C/AFL662Q.Seq.d/                       1124   0.0
SFD165 (SFD165Q) /CSM/SF/SFD1-C/SFD165Q.Seq.d/                       1116   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

BF272976|BF272976.1 GA__Eb0016H03f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Eb0016H03f, mRNA sequence.    48   3e-06  2
CA933944|CA933944.1 MTU3TS.P14.F11 Aspen stem cDNA Library Populus tremuloides cDNA, mRNA sequence.    54   3e-06  2
CB821514|CB821514.1 EST 2365 Half-Ripe Apricot Fruit Lambda Zap II Library Prunus armeniaca cDNA clone be002m12 3', mRNA sequence.    60   4e-05  1
BU041737|BU041737.1 PP_LEa0010F03f Peach developing fruit mesocarp Prunus persica cDNA clone PP_LEa0010F03f, mRNA sequence.    60   4e-05  1
BQ916199|BQ916199.1 QHB17B15.yg.ab1 QH_ABCDI sunflower RHA801 Helianthus annuus cDNA clone QHB17B15, mRNA sequence.    58   2e-04  1
AJ561748|AJ561748.1 Cryptosporidium parvum GSS, PAC clone pica_0004_g07, T7 end  sequence.    34   0.002  3
CK097096|CK097096.1 UB38BPH04.3pR Populus active cambium cDNA library Populus tremula cDNA clone UB38BPH04 3', mRNA sequence.    54   0.003  1
BU822525|BU822525.1 UB38BPH04 Populus tremula cambium cDNA library Populus tremula cDNA 5 prime, mRNA sequence.    54   0.003  1
BU895987|BU895987.1 X033H08 Populus wood cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA sequence.    54   0.003  1
AV202542|AV202542.1 Caenorhabditis elegans cDNA clone:yk551g8 : 5' end, single read.    44   0.012  2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q84K11) RecName: Full=Serine/threonine protein phosphatase 5;  ...   228   9e-59
CR848198_1(CR848198|pid:none) Xenopus tropicalis finished cDNA, ...   228   2e-58
BC080162_1(BC080162|pid:none) Xenopus tropicalis ppp5c protein, ...   228   2e-58
CR859667_1(CR859667|pid:none) Pongo abelii mRNA; cDNA DKFZp459E1...   227   2e-58
(P53041) RecName: Full=Serine/threonine-protein phosphatase 5;  ...   227   3e-58
CP001323_193(CP001323|pid:none) Micromonas sp. RCC299 chromosome...   227   3e-58
AK297095_1(AK297095|pid:none) Homo sapiens cDNA FLJ55717 complet...   227   3e-58
AK223222_1(AK223222|pid:none) Homo sapiens mRNA for protein phos...   227   3e-58
AK293402_1(AK293402|pid:none) Homo sapiens cDNA FLJ55048 complet...   227   3e-58
BC078786_1(BC078786|pid:none) Rattus norvegicus protein phosphat...   225   1e-57

 psg: 0.93  gvh: 0.39  alm: 0.34  top: 0.60  tms: 0.00  mit: 0.35  mip: 0.05
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 36.0 %: mitochondrial
	 32.0 %: cytoplasmic
	 20.0 %: nuclear
	  8.0 %: cytoskeletal
	  4.0 %: peroxisomal

>> prediction for SFF103 is mit

>SFF103Z.Seq
----------GATAGGGGTAGTTTTTAGTTTTTGAAAATTATCATCACTCTATTGGCTTA
TAAAATTATTTGTACCCCAAATCATATGCATTTGACAAGGGGTAACCATGAGACAACCGA
TATGAATCGTTTCTATGGTTTCCAAGGCGAAGTGGTTGCAAAATACAGTGAGATGGTATT
CGATCTATTCTCAGAGTTGTTCAATTGGTTCCCATTGGCATTCGTGTTGGATGAATCGTT
TATGGTGGTACATGGTGGTTTGTTTGGTAAGGATGGTGTCACACTTGACGATATTAGAAA
GATTAAACGTAATGCACCAGATCCAAAAGATAATGAATTGGTTCAATGCTTACTTTGGTC
TGATCCTCAATCAAATCCTGGTATTGCTCCTTCTTCAAGAGGTGTAGGTGTTTACTTTGG
ACCTGATGTCACCAGACGTTTCCTCAAGGAAAATAATCTATCAACTATCATTAGATCTCA
TGAAGTTAAAGAAAAAGGTTATCAAATCGATGATGATGGTTCTCTCATCACTGTTTTCTC
TGCTCCAAATTATTGTGATCAATCTGGTAATCTTGGCTCATTTATAAATATAACNAAGAT
AAAATTAAAATTACAACTTTNAAGCTGTNAACATCCGAATNACCACCAATGCATAGCCAA
AAAAA