>SFE866 (SFE866Q) /CSM/SF/SFE8-C/SFE866Q.Seq.d/
XXXXXXXXXXAATAAATCAGCAGCCTNCGATTATTTAATTAAATTACTTTTAATCGGTGA
TAGTGGTGTAGGTAAATCATGTCTTTTATTACGTTTTTCTGAAGATTCTTTCACACCAAG
TTTCATCACTACTATTGGTATCGATTTCAAAATTCGNACAATTGAATTGGAAGGTAAAAG
AATTAAATTACAAATTTGGGATACTGCAGGTCAAGAAAGATTCAGANCTATCACTACAGC
ATACTATCGTGGTGCTATGGGTATCCTATTGGTTTATGATGTCACTGATGAAAAATCTTT
TGGTAACATTAGAAATTGGATTAGAAATATCGAGCAACATGCTACAGACTCTGTTAATAA
AATGTTAATCGGTAATAAATGTGATATGGCTGAAAAGAANAGNTGTTGATAGCTCA

---KSAAXDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRI
KLQIWDTAGQERFRXITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDSVNKM
LIGNKCDMAEKXXC**l

Frame A:
---inqqpxii*lnyf*svivv*vnhvfyyvflkilshqvsslllvsiskfxqlnwkvke
lnykfgilqvkkdsxlslqhtivvlwvsywfmmslmknllvtleigleissnmlqtllik
c*svinviwlkrxxvdss


Frame B:
---*isslrlfn*itfnr**wcr*imsfitff*rffhtkfhhyywyrfqnsxn*igr*kn
*itnlgycrsrkiqxyhysilswcygypigl*ch**kifw*h*kld*kyratcyrlc**n
vnr**m*yg*kexxlia


Frame C:
---KSAAXDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRI
KLQIWDTAGQERFRXITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDSVNKM
LIGNKCDMAEKXXC**l

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SFE866 (SFE866Q) /CSM/SF/SFE8-C/SFE866Q.Seq.d/                        775   0.0
AFM876 (AFM876Q) /CSM/AF/AFM8-D/AFM876Q.Seq.d/                        759   0.0
VFH706 (VFH706Q) /CSM/VF/VFH7-A/VFH706Q.Seq.d/                        737   0.0
SFI634 (SFI634Q) /CSM/SF/SFI6-B/SFI634Q.Seq.d/                        714   0.0
SSK334 (SSK334Q) /CSM/SS/SSK3-B/SSK334Q.Seq.d/                        706   0.0
SSC355 (SSC355Q) /CSM/SS/SSC3-C/SSC355Q.Seq.d/                        694   0.0
VFK248 (VFK248Q) /CSM/VF/VFK2-B/VFK248Q.Seq.d/                        688   0.0
SSH118 (SSH118Q) /CSM/SS/SSH1-A/SSH118Q.Seq.d/                        674   0.0
VFE469 (VFE469Q) /CSM/VF/VFE4-C/VFE469Q.Seq.d/                        670   0.0
AFN511 (AFN511Q) /CSM/AF/AFN5-A/AFN511Q.Seq.d/                        664   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

M34457|M34457.1 Dictyostelium discoideum GTP-binding protein SAS1 gene, complete cds.   753   0.0    1
AC114263|AC114263.2 Dictyostelium discoideum chromosome 2 map 215673-367476 strain AX4, complete sequence.   603   e-169  1
M34456|M34456.1 D.discoideum GTP-binding protein (SAS1) gene, complete cds.   603   e-169  1
L21009|L21009.1 Dictyostelium discoideum Rab1A mRNA, complete cds.   109   7e-46  3
L21010|L21010.1 Dictyostelium discoideum Rab1B mRNA, 3' end of cds.    84   6e-29  4
BQ857744|BQ857744.1 QGB8F15.yg.ab1 QG_ABCDI lettuce salinas Lactuca sativa cDNA clone QGB8F15, mRNA sequence.    62   4e-23  3
BI678057|BI678057.1 CLS941 CLS (Cambium and bark region of black locust - Summer) Robinia pseudoacacia cDNA, mRNA sequence.   117   1e-22  1
U02927|U02927.1 Dictyostelium discoideum Ax3 Rab4 mRNA, complete cds.    94   2e-22  3
Z49899|Z49899.1 P.sativum mRNA for small G protein.                94   1e-21  2
AL385573|AL385573.1 Medicago truncatula EST MtBC29C12F1 : T3 end of clone MtBC29C12 of  cDNA library MtBC from arbuscular mycorrhiza of cultivar Jemalong of Medicago truncatula (barrel medic).    66   4e-21  2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(P20790) RecName: Full=Ras-related protein Rab-8A; AltName: Full...   255   4e-67
(P20791) RecName: Full=Ras-related protein Rab-8B; AltName: Full...   240   9e-63
BT070243_1(BT070243|pid:none) Picea sitchensis clone WS02711_M12...   225   4e-58
AJ272025_1(AJ272025|pid:none) Colletotrichum lindemuthianum pt1 ...   223   2e-57
AC117265_12(AC117265|pid:none) Oryza sativa (japonica cultivar-g...   222   3e-57
GM977153_1(GM977153|pid:none) Sequence 61 from Patent WO20081456...   222   3e-57
GM977111_1(GM977111|pid:none) Sequence 19 from Patent WO20081456...   222   3e-57
AB079020_1(AB079020|pid:none) Nicotiana tabacum mRNA for ras-rel...   222   3e-57
AC125368_16(AC125368|pid:none) Medicago truncatula clone mth2-13...   222   3e-57
AB015475_6(AB015475|pid:none) Arabidopsis thaliana genomic DNA, ...   222   3e-57

 psg: 0.81  gvh: 0.51  alm: 0.41  top: 0.53  tms: 0.00  mit: 0.22  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 1.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 56.0 %: cytoplasmic
	 32.0 %: nuclear
	  8.0 %: vesicles of secretory system
	  4.0 %: mitochondrial

>> prediction for SFE866 is cyt

>SFE866Z.Seq
----------AATAAATCAGCAGCCTNCGATTATTTAATTAAATTACTTTTAATCGGTGA
TAGTGGTGTAGGTAAATCATGTCTTTTATTACGTTTTTCTGAAGATTCTTTCACACCAAG
TTTCATCACTACTATTGGTATCGATTTCAAAATTCGNACAATTGAATTGGAAGGTAAAAG
AATTAAATTACAAATTTGGGATACTGCAGGTCAAGAAAGATTCAGANCTATCACTACAGC
ATACTATCGTGGTGCTATGGGTATCCTATTGGTTTATGATGTCACTGATGAAAAATCTTT
TGGTAACATTAGAAATTGGATTAGAAATATCGAGCAACATGCTACAGACTCTGTTAATAA
AATGTTAATCGGTAATAAATGTGATATGGCTGAAAAGAANAGNTGTTGATAGCTCA