SFE744
Library SF
(Link to library)
Clone ID SFE744
Atlas ID -
NBRP ID -
dictyBase ID -
Link to Contig Contig-U16252-1
Original site URL
Representative seq. ID SFE744P
(Link to Original site)
Representative DNA sequence
>SFE744 (SFE744Q) /CSM/SF/SFE7-B/SFE744Q.Seq.d/
CACTGTTGGCCTACTGGATTTTTTTTTATCTCTATCTATATATATATCATTTTTTAAAAT
GAGCGTCATCAAATCAATTAAAGCCAGAGAAATTTTAGATTCACGTGGTAACCCAACTGT
TGAAGTTGACCTTTACACCGAAAAAGATGGTGTTGTTTCATCATTCAGAGCTGCAGTTCC
ATCAGGTGCATCAACTGGTATTTATGAAGCTGTTGAATTAAGAGATGGTGATAAATCAAG
ATACTTAGGTAAAGGTGTACTCAAAGCAATCAAAAACATTCTCGAAGTCATTCAACCAGC
CGTCATTGGTAAATCAGTTTCCGATCAAGCTGCTATCGATAAATTAATGATCGATCTCGA
TGGTACCCCAAATAAAGGTAAATTAGGTGCCAACGCTATCCTTGCAGTCAGTTTAGCTGT
TTGCAGAGCTGGTGCTGCTGATAGAAATTTACCACTTTACAAATATATCTCAGAAATTGC
AGGTACTAAAATGAGATTACCAGTTCCAGCATTCAATGTTATCAATGGTGGTTCACATGC
AGGTAATAAATTAGCTATGCAAGAATTTATGATTTTACCAGTTGGTGCTAAAGATTTCAA
TGAAGCCTATCGTATGGGTTCAGAAGXXXXXXXXXXGTTTATCATAACTTAAAGAATGTC
ATCAGTGGTAGATACGGTCAAGATGCTATCAATGTTGGTGATGAAGGTGGTTTCGCTCCA
CCAATTCAAAGCAACAAAGAAGGTCTTGAACTCTTAAAACTTGCCATTGAAAAAGCTGGT
TACACAGGTTTAGTTAAAATTGGTATGGATTGTGCTGCCTCTGAATTCAAAGTTGAAAAT
GGTTACGATCTTGACTTCAAAACTAAAAACAATGACGGTTCAGCTGTTATCTCTGGTGAA
AAATTAGGTGATCTCTACAGAGAATTCATTAAAGAATATCCAATCATTTCAATTGAAGAT
CCATTTGATCAAGATGATTGGGAATCATACACTAAATTAACAGCATCAGTTGATATTCAA
ATTGTTGGTGATGATTTACTTGTTACCAACCCAGAAAGAATTAAGACTGGTATTGAAAAG
AAAGCATGTAATGCTCTTTTATTAAAAGTTAACCAAATTGGTTCAGTCACTGAATCAATT
CGTGCCGCTCTTGACTCAAAGAATGCATCATGGGGTGTCATGGTTAGCCATCGTTCAGGT
GAAACTGAAGATACCTTCATTGCTGATTTAGTTGTTGGTTTAGGTACTGGTCAAATTAAA
ACTGGTGCTCCATGTAGATCAGAAAGATTAGCCAAATACAATCAACTTGTTAGAATTAAC
GAAGAGTTAGGTGAAAACCATAACTATGCTGGTTTAACTTTCCGTAAATTTTAATTTTAC
TCATAATATGNAAACAAAAC
sequence update 2001. 6. 1
Translated Amino Acid sequence
TVGLLDFFLSLSIYISFFKMSVIKSIKAREILDSRGNPTVEVDLYTEKDGVVSSFRAAVP
SGASTGIYEAVELRDGDKSRYLGKGVLKAIKNILEVIQPAVIGKSVSDQAAIDKLMIDLD
GTPNKGKLGANAILAVSLAVCRAGAADRNLPLYKYISEIAGTKMRLPVPAFNVINGGSHA
GNKLAMQEFMILPVGAKDFNEAYRMGSE---

---VYHNLKNVISGRYGQDAINVGDEGGFAPPIQSNKEGLELLKLAIEKAGYTGLVKIGM
DCAASEFKVENGYDLDFKTKNNDGSAVISGEKLGDLYREFIKEYPIISIEDPFDQDDWES
YTKLTASVDIQIVGDDLLVTNPERIKTGIEKKACNALLLKVNQIGSVTESIRAALDSKNA
SWGVMVSHRSGETEDTFIADLVVGLGTGQIKTGAPCRSERLAKYNQLVRINEELGENHNY
AGLTFRKF*fys*yxnk


Translated Amino Acid sequence (All Frames)
Frame A:
hcwptgfffisiyiyiif*nerhqin*sqrnfrftw*pnc*s*plhrkrwccfiiqscss
ircinwyl*sc*ikrw**ikilr*rctqsnqkhsrshstsrhw*isfrsscyr*indrsr
wypk*r*ircqrypcsqfsclqswcc**kfttlqiylrncry*neitsssiqcyqwwftc
r**isyariydftswc*rfq*slsygfr---

---VYHNLKNVISGRYGQDAINVGDEGGFAPPIQSNKEGLELLKLAIEKAGYTGLVKIGM
DCAASEFKVENGYDLDFKTKNNDGSAVISGEKLGDLYREFIKEYPIISIEDPFDQDDWES
YTKLTASVDIQIVGDDLLVTNPERIKTGIEKKACNALLLKVNQIGSVTESIRAALDSKNA
SWGVMVSHRSGETEDTFIADLVVGLGTGQIKTGAPCRSERLAKYNQLVRINEELGENHNY
AGLTFRKF*fys*yxnk

Frame B:
TVGLLDFFLSLSIYISFFKMSVIKSIKAREILDSRGNPTVEVDLYTEKDGVVSSFRAAVP
SGASTGIYEAVELRDGDKSRYLGKGVLKAIKNILEVIQPAVIGKSVSDQAAIDKLMIDLD
GTPNKGKLGANAILAVSLAVCRAGAADRNLPLYKYISEIAGTKMRLPVPAFNVINGGSHA
GNKLAMQEFMILPVGAKDFNEAYRMGSE---

---fiit*rmssvvdtvkmlsmlvmkvvslhqfkatkkvlns*nlplkklvtqv*lklvw
ivlplnsklkmvtiltsklktmtvqllslvkn*vistenslkniqsfqlkihlikmignh
tln*qhqlifkllvmiyllptqkelrlvlkrkhvmlfy*kltklvqslnqfvplltqrmh
hgvswlaivqvklkipslli*llv*vlvklklvlhvdqkd*pntinlleltks*vktitm
lv*lsvnfnfthnmxtk

Frame C:
llaywiffylylyiyhflk*assnqlkpekf*ihvvtqllkltftpkkmvlfhhselqfh
qvhqlvfmklln*emvinqdt*vkvyskqsktfsksfnqpslvnqfpikllsin**sism
vpqikvn*vptlslqsv*lfaelvllieiyhftnisqklqvlk*dyqfqhsmlsmvvhmq
vin*lcknl*fyqlvlkismkpivwvqk---

---ls*lkechqw*irsrcyqcw**rwfrstnskqqrrs*tlktch*kswlhrfs*nwyg
lccl*iqs*kwlrs*lqn*kq*rfscylw*kir*slqrih*risnhfn*rsi*sr*lgii
h*insis*ysncw**ftcyqprkn*dwy*kesm*csfiks*pnwfsh*inscrs*lkeci
mgchg*psfr*n*rylhc*fscwfrywsn*nwcsm*irkisqiqstc*n*rrvr*kp*lc
wfnfp*ililliixkqn

Homology vs CSM-cDNA

Score E
Sequences producing significant alignments: (bits) Value

SFE744 (SFE744Q) /CSM/SF/SFE7-B/SFE744Q.Seq.d/ 2656 0.0
SSI448 (SSI448Q) /CSM/SS/SSI4-B/SSI448Q.Seq.d/ 1495 0.0
SFC169 (SFC169Q) /CSM/SF/SFC1-C/SFC169Q.Seq.d/ 1485 0.0
AFC723 (AFC723Q) /CSM/AF/AFC7-A/AFC723Q.Seq.d/ 1483 0.0
SLA770 (SLA770Q) /CSM/SL/SLA7-C/SLA770Q.Seq.d/ 1481 0.0
AFK881 (AFK881Q) /CSM/AF/AFK8-D/AFK881Q.Seq.d/ 1475 0.0
VFE233 (VFE233Q) /CSM/VF/VFE2-B/VFE233Q.Seq.d/ 1473 0.0
SFB722 (SFB722Q) /CSM/SF/SFB7-A/SFB722Q.Seq.d/ 1473 0.0
CHB226 (CHB226Q) /CSM/CH/CHB2-B/CHB226Q.Seq.d/ 1473 0.0
AFG692 (AFG692Q) /CSM/AF/AFG6-D/AFG692Q.Seq.d/ 1473 0.0

own update 2004.12.25
Homology vs DNA

Score E
Sequences producing significant alignments: (bits) Value N

X80474|X80474.1 N.frontalis enolase gene. 64 1e-76 13
Y17298|Y17298.1 Cunninghamella elegans mRNA for enolase. 86 3e-72 11
BD183626|BD183626.1 Material for diagnosing malaria and immune antigen for suppressing growth of plasmodium. 76 1e-62 10
BD183625|BD183625.1 Material for diagnosing malaria and immune antigen for suppressing growth of plasmodium. 76 1e-62 10
AB026051|AB026051.1 Plasmodium falciparum mRNA for enolase, complete cds. 76 1e-62 10
U00152|U00152.1 Plasmodium falciparum enolase gene complete cds. 76 1e-60 9
BM165201|BM165201.1 EST567724 PyBS Plasmodium yoelii yoelii cDNA clone PYCMI87 5' end, mRNA sequence. 92 1e-53 5
AF348930|AF348930.1 Tetrahymena bergeri enolase (eno) gene, partial cds. 66 3e-49 7
BM395755|BM395755.1 5009-0-10-H08.t.1 Chilcoat/Turkewitz cDNA (large fraction) Tetrahymena thermophila cDNA, mRNA sequence. 121 3e-48 5
AX619982|AX619982.1 Sequence 2945 from Patent WO02094868. 50 6e-47 10
dna update 2003.12.24
Homology vs Protein

Score E
Sequences producing significant alignments: (bits) Value

(Q54RK5) RecName: Full=Enolase A; EC=4.2.1.11; AltName:... 492 0.0
BC045082_1(BC045082|pid:none) Xenopus laevis enolase 3, beta mus... 343 e-163
BC096516_1(BC096516|pid:none) Xenopus tropicalis hypothetical pr... 342 e-162
T12341(T12341) phosphopyruvate hydratase (EC 4.2.1.11) - common ... 361 e-162
(Q43130) RecName: Full=Enolase; EC=4.2.1.11; AltName: F... 360 e-162
(P26300) RecName: Full=Enolase; EC=4.2.1.11; AltName: F... 357 e-162
EU964132_1(EU964132|pid:none) Zea mays clone 276124 enolase mRNA... 354 e-162
BC071359_1(BC071359|pid:none) Danio rerio enolase 1, (alpha), mR... 339 e-160
BC092869_1(BC092869|pid:none) Danio rerio enolase 3, (beta, musc... 343 e-159
AY398342_1(AY398342|pid:none) Danio rerio clone RK122A2D02 enola... 342 e-159
protein update 2009. 5.23
PSORT

psg: 0.75 gvh: 0.46 alm: 0.31 top: 0.67 tms: 0.07 mit: 0.29 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.60 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 1.00 tyr: 0.00 leu: 0.04 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 1.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 0.00

28.0 %: cytoplasmic
28.0 %: nuclear
20.0 %: mitochondrial
8.0 %: plasma membrane
8.0 %: endoplasmic reticulum
4.0 %: vesicles of secretory system
4.0 %: peroxisomal

>> prediction for SFE744 is cyt

5' end seq. ID SFE744F
5' end seq.
>SFE744F.Seq
CACTGTTGGCCTACTGGATTTTTTTTTATCTCTATCTATATATATATCATTTTTTAAAAT
GAGCGTCATCAAATCAATTAAAGCCAGAGAAATTTTAGATTCACGTGGTAACCCAACTGT
TGAAGTTGACCTTTACACCGAAAAAGATGGTGTTGTTTCATCATTCAGAGCTGCAGTTCC
ATCAGGTGCATCAACTGGTATTTATGAAGCTGTTGAATTAAGAGATGGTGATAAATCAAG
ATACTTAGGTAAAGGTGTACTCAAAGCAATCAAAAACATTCTCGAAGTCATTCAACCAGC
CGTCATTGGTAAATCAGTTTCCGATCAAGCTGCTATCGATAAATTAATGATCGATCTCGA
TGGTACCCCAAATAAAGGTAAATTAGGTGCCAACGCTATCCTTGCAGTCAGTTTAGCTGT
TTGCAGAGCTGGTGCTGCTGATAGAAATTTACCACTTTACAAATATATCTCAGAAATTGC
AGGTACTAAAATGAGATTACCAGTTCCAGCATTCAATGTTATCAATGGTGGTTCACATGC
AGGTAATAAATTAGCTATGCAAGAATTTATGATTTTACCAGTTGGTGCTAAAGATTTCAA
TGAAGCCTATCGTATGGGTTCAGAAG----------
Length of 5' end seq. 626
3' end seq. ID SFE744Z
3' end seq.
>SFE744Z.Seq
----------GTTTATCATAACTTAAAGAATGTCATCAGTGGTAGATACGGTCAAGATGC
TATCAATGTTGGTGATGAAGGTGGTTTCGCTCCACCAATTCAAAGCAACAAAGAAGGTCT
TGAACTCTTAAAACTTGCCATTGAAAAAGCTGGTTACACAGGTTTAGTTAAAATTGGTAT
GGATTGTGCTGCCTCTGAATTCAAAGTTGAAAATGGTTACGATCTTGACTTCAAAACTAA
AAACAATGACGGTTCAGCTGTTATCTCTGGTGAAAAATTAGGTGATCTCTACAGAGAATT
CATTAAAGAATATCCAATCATTTCAATTGAAGATCCATTTGATCAAGATGATTGGGAATC
ATACACTAAATTAACAGCATCAGTTGATATTCAAATTGTTGGTGATGATTTACTTGTTAC
CAACCCAGAAAGAATTAAGACTGGTATTGAAAAGAAAGCATGTAATGCTCTTTTATTAAA
AGTTAACCAAATTGGTTCAGTCACTGAATCAATTCGTGCCGCTCTTGACTCAAAGAATGC
ATCATGGGGTGTCATGGTTAGCCATCGTTCAGGTGAAACTGAAGATACCTTCATTGCTGA
TTTAGTTGTTGGTTTAGGTACTGGTCAAATTAAAACTGGTGCTCCATGTAGATCAGAAAG
ATTAGCCAAATACAATCAACTTGTTAGAATTAACGAAGAGTTAGGTGAAAACCATAACTA
TGCTGGTTTAACTTTCCGTAAATTTTAATTTTACTCATAATATGNAAACAAAAC
Length of 3' end seq. 764
Connected seq. ID SFE744P
Connected seq.
>SFE744P.Seq
CACTGTTGGCCTACTGGATTTTTTTTTATCTCTATCTATATATATATCATTTTTTAAAAT
GAGCGTCATCAAATCAATTAAAGCCAGAGAAATTTTAGATTCACGTGGTAACCCAACTGT
TGAAGTTGACCTTTACACCGAAAAAGATGGTGTTGTTTCATCATTCAGAGCTGCAGTTCC
ATCAGGTGCATCAACTGGTATTTATGAAGCTGTTGAATTAAGAGATGGTGATAAATCAAG
ATACTTAGGTAAAGGTGTACTCAAAGCAATCAAAAACATTCTCGAAGTCATTCAACCAGC
CGTCATTGGTAAATCAGTTTCCGATCAAGCTGCTATCGATAAATTAATGATCGATCTCGA
TGGTACCCCAAATAAAGGTAAATTAGGTGCCAACGCTATCCTTGCAGTCAGTTTAGCTGT
TTGCAGAGCTGGTGCTGCTGATAGAAATTTACCACTTTACAAATATATCTCAGAAATTGC
AGGTACTAAAATGAGATTACCAGTTCCAGCATTCAATGTTATCAATGGTGGTTCACATGC
AGGTAATAAATTAGCTATGCAAGAATTTATGATTTTACCAGTTGGTGCTAAAGATTTCAA
TGAAGCCTATCGTATGGGTTCAGAAG----------GTTTATCATAACTTAAAGAATGTC
ATCAGTGGTAGATACGGTCAAGATGCTATCAATGTTGGTGATGAAGGTGGTTTCGCTCCA
CCAATTCAAAGCAACAAAGAAGGTCTTGAACTCTTAAAACTTGCCATTGAAAAAGCTGGT
TACACAGGTTTAGTTAAAATTGGTATGGATTGTGCTGCCTCTGAATTCAAAGTTGAAAAT
GGTTACGATCTTGACTTCAAAACTAAAAACAATGACGGTTCAGCTGTTATCTCTGGTGAA
AAATTAGGTGATCTCTACAGAGAATTCATTAAAGAATATCCAATCATTTCAATTGAAGAT
CCATTTGATCAAGATGATTGGGAATCATACACTAAATTAACAGCATCAGTTGATATTCAA
ATTGTTGGTGATGATTTACTTGTTACCAACCCAGAAAGAATTAAGACTGGTATTGAAAAG
AAAGCATGTAATGCTCTTTTATTAAAAGTTAACCAAATTGGTTCAGTCACTGAATCAATT
CGTGCCGCTCTTGACTCAAAGAATGCATCATGGGGTGTCATGGTTAGCCATCGTTCAGGT
GAAACTGAAGATACCTTCATTGCTGATTTAGTTGTTGGTTTAGGTACTGGTCAAATTAAA
ACTGGTGCTCCATGTAGATCAGAAAGATTAGCCAAATACAATCAACTTGTTAGAATTAAC
GAAGAGTTAGGTGAAAACCATAACTATGCTGGTTTAACTTTCCGTAAATTTTAATTTTAC
TCATAATATGNAAACAAAAC
Length of connected seq. 1390
Full length Seq ID -
Full length Seq. -
Length of full length seq. -