>SFE194 (SFE194Q) /CSM/SF/SFE1-D/SFE194Q.Seq.d/
TTGCTCGTTCTGCTTTACGATTAACAGCTAATTTAGAACTGTGACGATCACCGGGAATCC
AACTGTTTAATTAAAACAAAGCATTGCGATAAGCTTAAAAGCTTTTGACGCAATGTGATT
TCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAGATTCAACCTAGCACGGGTAAACGGCGG
GAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCAT
GAATGGATCAATGAGATTCCCACTGTCCCTAACTACTATACAGCGAAACCACTGCAAGGG
GAACGGGCCTTGCAAAAACAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCTGA
TATTGCATAGTGACCTAAAAGGTGTAGAATAGGTGGGAGGGGCAACCCGACGGTGAAATA
CCACCCCTTTTGGCGTTACTTTGCTAACTTGGAATAACAGTACCTCATAATTCATTTTAT
GATGGTTTTGGTGAATAAGCGGATCAACCACGGGTGAAATCTGTGCAAATTGGGCAACTG
ATTTGTATAGCAAAGTAGTCCCTCTGGTCCCGTATTATGTCGACXXXXXXXXXXAGGGCA
AAAGCCTGCTTGATTCTGATTTTCAGTACTAATCGGAACTGGGAAACCAGGGCCTATCGA
TCCTTTATGTGCTTAAATCTTAGGCCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACT
GGCTTGTGGCAGCCAAGCGCTCATAGCGACGCTGCTTTTTGATCCTTCGATGTCGGCTCT
TCTTATCATTGTGAAGCAGAATTCACAAAGTGTTGGATTGTTCACCCACTAACAAGGAAC
GTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGTTGTCAATTGTT
TGCGTAATAGTAGCATGATTTAGTACGAGAGGAACTGTCATGCCGGATCACTGGTCTGTA
GGTTTATTTGACAAAATAGTGACCTGCCGCTACCATCCGTTGGATAATGGCTGAACGCCT
CTAAGTCAGAATCCATTCTAGAAACGCAAACCAAATGCTTTAGAGTGTGAATGTTGTAGG
TAACATTAGGTTGTTGGTGGGGGACCACTTTCAACTTTAAACCATATGATTAATCGCTGT
TACACTGCAGTTTCCTTCCGGTTATTGTGGTGGGTGGCTAAATTCTAATTTATATCCTCG
TTCCGCTCAACTCTTCGATTGTAGACGACTATCAAATGAACTAGGTGCTGTAAGCTTCCG
AGTAGCGTTCAGTTACGAGGGGTTGAGGCTTTTCCATAGTTCTTATTCAAAAAT

arsalrltanlel*rspgiqlfn*nkalr*a*klltqcdfcpvl*msk*rdst*hg*tag
vtmtllr*pnasssn**ra*mdq*dshcp*llysettargtglaktagkedpveldssli
lhsdlkgve*vggatrr*nttpfgvtlltwnnsts*fil*wfw*ISGSTTGEICANWATD
LYSKVVPLVPYYVD---

---RAKACLILIFSTNRNWETRAYRSFMCLNLRPRGVRKVTTGITGLWQPSAHSDAAF*s
fdvgssyhceaeftkcwivhpltrnvswv*tvvrqvsftlllsivcviva*fstrgtvmp
dhwsvglfdkivtcryhpldng*tplsqnpf*krkpnalececcr*h*vvgggplstlnh
minrcytavsfrllwwvakf*fissfrstlrl*ttik*trccklpssvqlrgveafp*fl
fkn

Frame A:
llvllyd*qli*ncddhresncliktkhcdklksf*rnvisaqcsecqseeiqpstgkrr
e*l*ls*gsqmprhlisdahewineiptvpnyytakplqgeralqkqrgkktllsltlv*
ycivt*kv*nrwegqpdgeippllallc*lgitvphnsfydgfge*adqprvksvqigql
iciak*slwsrims---

---RAKACLILIFSTNRNWETRAYRSFMCLNLRPRGVRKVTTGITGLWQPSAHSDAAF*s
fdvgssyhceaeftkcwivhpltrnvswv*tvvrqvsftlllsivcviva*fstrgtvmp
dhwsvglfdkivtcryhpldng*tplsqnpf*krkpnalececcr*h*vvgggplstlnh
minrcytavsfrllwwvakf*fissfrstlrl*ttik*trccklpssvqlrgveafp*fl
fkn

Frame B:
csfcftins*frtvtitgnptv*lkqsiaislkafdam*flpsalnvkvkrfnlarvngg
snydslkvakclvi*lvtrmngsmrfplslttiqrnhckgngpcknsgerrpc*a*l*sd
ia**pkrcriggrgnptvkyhpfwryfanle*qyliihfmmvlvnkrinhg*nlcklgn*
fv*qsspsgpvlcr---

---gqkpa*f*fsvligtgkpgpidplca*ilglevseklpqg*lacgsqaliatllfdp
smsalliivkqnsqsvglfth*qgt*agfrps*drlvlpyccqlfa***hdlvreelscr
itgl*vyltk**paatirwimaerl*vrihsrnanqml*svnvvgnirllvgdhfql*ti
*liavtlqfpsgycggwlnsnlyprsaqlfdcrrlsnelgavsfrvafsyeglrlfhssy
sk

Frame C:
arsalrltanlel*rspgiqlfn*nkalr*a*klltqcdfcpvl*msk*rdst*hg*tag
vtmtllr*pnasssn**ra*mdq*dshcp*llysettargtglaktagkedpveldssli
lhsdlkgve*vggatrr*nttpfgvtlltwnnsts*fil*wfw*ISGSTTGEICANWATD
LYSKVVPLVPYYVD---

---gkslldsdfqy*selgnqglsilyvlks*a*rcqksyhrdnwlvaakrs*rrcflil
rcrlflsl*srihkvldcsptnkerelgldrretg*fyptvvnclrnssmi*yernchag
slvcrfi*qnsdlplpsvg*wlnasksesiletqtkcfrv*ml*vtlgcwwgttfnfkpy
d*sllhcsflpvivvgg*iliyilvplnssivddyqmn*vl*ase*rsvtrg*gfsivli
qk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SFE194 (SFE194Q) /CSM/SF/SFE1-D/SFE194Q.Seq.d/                       2545   0.0
VHD592 (VHD592Q) /CSM/VH/VHD5-D/VHD592Q.Seq.d/                       1405   0.0
SHA880 (SHA880Q) /CSM/SH/SHA8-D/SHA880Q.Seq.d/                       1405   0.0
CHI557 (CHI557Q) /CSM/CH/CHI5-C/CHI557Q.Seq.d/                       1392   0.0
SFC338 (SFC338Q) /CSM/SF/SFC3-B/SFC338Q.Seq.d/                       1390   0.0
CHL604 (CHL604Q) /CSM/CH/CHL6-A/CHL604Q.Seq.d/                       1388   0.0
VHQ477 (VHQ477Q) /CSM/VH/VHQ4-D/VHQ477Q.Seq.d/                       1386   0.0
VHI207 (VHI207Q) /CSM/VH/VHI2-A/VHI207Q.Seq.d/                       1386   0.0
VHA465 (VHA465Q) /CSM/VH/VHA4-C/VHA465Q.Seq.d/                       1386   0.0
SLE369 (SLE369Q) /CSM/SL/SLE3-C/SLE369Q.Seq.d/                       1386   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AY171066|AY171066.1 Dictyostelium discoideum extrachromosomal palindromic ribosomal RNA gene sequence, central segment.  1386   0.0    1
X00601|X00601.1 Dictyostelium discoideum ribosomal RNA gene.     1150   0.0    2
AC122172|AC122172.25 Medicago truncatula clone mth2-27e7, WORKING DRAFT SEQUENCE, 18 unordered pieces.   375   0.0    12
AC121240|AC121240.18 Medicago truncatula clone mth1-51o19, WORKING DRAFT SEQUENCE, 12 unordered pieces.   375   0.0    13
AC136838|AC136838.17 Medicago truncatula clone mth1-5j15, WORKING DRAFT SEQUENCE, 9 unordered pieces.   375   0.0    12
AL158197|AL158197.26 Human DNA sequence *** SEQUENCING IN PROGRESS *** from clone  RP11-368H14.   363   0.0    15
AF419983|AF419983.1 Closterium calosporum var. calosporum 26S ribosomal RNA gene, partial sequence.   406   0.0    9
AF419986|AF419986.1 Closterium spinosporum var. malaysiense 26S ribosomal RNA gene, partial sequence.   406   0.0    9
AF419988|AF419988.1 Closterium spinosporum var. ryukyuense 26S ribosomal RNA gene and intergenic spacer, partial sequence.   406   0.0    9
AF419996|AF419996.1 Closterium calosporum var. himalayense 26S ribosomal RNA gene, partial sequence.   406   0.0    8

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU430725_1(EU430725|pid:none) Cupressus sempervirens clone CYPLP...   138   4e-31
AY436773_1(AY436773|pid:none) Pyrus communis putative senescence...   100   2e-19
CP001575_406(CP001575|pid:none) Micromonas sp. RCC299 chromosome...    98   6e-19
AK230153_1(AK230153|pid:none) Arabidopsis thaliana mRNA for hypo...    95   6e-18
T02955(T02955)probable cytochrome P450 monooxygenase - maize (fr...    94   1e-17
EF676655_1(EF676655|pid:none) Picea sitchensis clone WS02746_H02...    89   4e-16
EU958272_1(EU958272|pid:none) Zea mays clone 1682540 hypothetica...    86   4e-15
BC142849_1(BC142849|pid:none) Danio rerio zgc:165536, mRNA (cDNA...    85   5e-15
AL844509_689(AL844509|pid:none) Plasmodium falciparum 3D7 chromo...    84   8e-15
AB182926_1(AB182926|pid:none) Citrullus lanatus mRNA for cytochr...    84   1e-14

 psg: 0.75  gvh: 0.33  alm: 0.40  top: 0.53  tms: 0.00  mit: 0.21  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 60.0 %: cytoplasmic
	 32.0 %: nuclear
	  4.0 %: plasma membrane
	  4.0 %: vesicles of secretory system

>> prediction for SFE194 is cyt

>SFE194F.Seq
TTGCTCGTTCTGCTTTACGATTAACAGCTAATTTAGAACTGTGACGATCACCGGGAATCC
AACTGTTTAATTAAAACAAAGCATTGCGATAAGCTTAAAAGCTTTTGACGCAATGTGATT
TCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAGATTCAACCTAGCACGGGTAAACGGCGG
GAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCAT
GAATGGATCAATGAGATTCCCACTGTCCCTAACTACTATACAGCGAAACCACTGCAAGGG
GAACGGGCCTTGCAAAAACAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCTGA
TATTGCATAGTGACCTAAAAGGTGTAGAATAGGTGGGAGGGGCAACCCGACGGTGAAATA
CCACCCCTTTTGGCGTTACTTTGCTAACTTGGAATAACAGTACCTCATAATTCATTTTAT
GATGGTTTTGGTGAATAAGCGGATCAACCACGGGTGAAATCTGTGCAAATTGGGCAACTG
ATTTGTATAGCAAAGTAGTCCCTCTGGTCCCGTATTATGTCGAC----------

>SFE194Z.Seq
----------AGGGCAAAAGCCTGCTTGATTCTGATTTTCAGTACTAATCGGAACTGGGA
AACCAGGGCCTATCGATCCTTTATGTGCTTAAATCTTAGGCCTAGAGGTGTCAGAAAAGT
TACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGCTCATAGCGACGCTGCTTTTTGATC
CTTCGATGTCGGCTCTTCTTATCATTGTGAAGCAGAATTCACAAAGTGTTGGATTGTTCA
CCCACTAACAAGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCT
ACTGTTGTCAATTGTTTGCGTAATAGTAGCATGATTTAGTACGAGAGGAACTGTCATGCC
GGATCACTGGTCTGTAGGTTTATTTGACAAAATAGTGACCTGCCGCTACCATCCGTTGGA
TAATGGCTGAACGCCTCTAAGTCAGAATCCATTCTAGAAACGCAAACCAAATGCTTTAGA
GTGTGAATGTTGTAGGTAACATTAGGTTGTTGGTGGGGGACCACTTTCAACTTTAAACCA
TATGATTAATCGCTGTTACACTGCAGTTTCCTTCCGGTTATTGTGGTGGGTGGCTAAATT
CTAATTTATATCCTCGTTCCGCTCAACTCTTCGATTGTAGACGACTATCAAATGAACTAG
GTGCTGTAAGCTTCCGAGTAGCGTTCAGTTACGAGGGGTTGAGGCTTTTCCATAGTTCTT
ATTCAAAAAT

>SFE194P.Seq
TTGCTCGTTCTGCTTTACGATTAACAGCTAATTTAGAACTGTGACGATCACCGGGAATCC
AACTGTTTAATTAAAACAAAGCATTGCGATAAGCTTAAAAGCTTTTGACGCAATGTGATT
TCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAGATTCAACCTAGCACGGGTAAACGGCGG
GAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCAT
GAATGGATCAATGAGATTCCCACTGTCCCTAACTACTATACAGCGAAACCACTGCAAGGG
GAACGGGCCTTGCAAAAACAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCTGA
TATTGCATAGTGACCTAAAAGGTGTAGAATAGGTGGGAGGGGCAACCCGACGGTGAAATA
CCACCCCTTTTGGCGTTACTTTGCTAACTTGGAATAACAGTACCTCATAATTCATTTTAT
GATGGTTTTGGTGAATAAGCGGATCAACCACGGGTGAAATCTGTGCAAATTGGGCAACTG
ATTTGTATAGCAAAGTAGTCCCTCTGGTCCCGTATTATGTCGAC----------AGGGCA
AAAGCCTGCTTGATTCTGATTTTCAGTACTAATCGGAACTGGGAAACCAGGGCCTATCGA
TCCTTTATGTGCTTAAATCTTAGGCCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACT
GGCTTGTGGCAGCCAAGCGCTCATAGCGACGCTGCTTTTTGATCCTTCGATGTCGGCTCT
TCTTATCATTGTGAAGCAGAATTCACAAAGTGTTGGATTGTTCACCCACTAACAAGGAAC
GTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGTTGTCAATTGTT
TGCGTAATAGTAGCATGATTTAGTACGAGAGGAACTGTCATGCCGGATCACTGGTCTGTA
GGTTTATTTGACAAAATAGTGACCTGCCGCTACCATCCGTTGGATAATGGCTGAACGCCT
CTAAGTCAGAATCCATTCTAGAAACGCAAACCAAATGCTTTAGAGTGTGAATGTTGTAGG
TAACATTAGGTTGTTGGTGGGGGACCACTTTCAACTTTAAACCATATGATTAATCGCTGT
TACACTGCAGTTTCCTTCCGGTTATTGTGGTGGGTGGCTAAATTCTAATTTATATCCTCG
TTCCGCTCAACTCTTCGATTGTAGACGACTATCAAATGAACTAGGTGCTGTAAGCTTCCG
AGTAGCGTTCAGTTACGAGGGGTTGAGGCTTTTCCATAGTTCTTATTCAAAAAT