>SFE173 (SFE173Q) /CSM/SF/SFE1-D/SFE173Q.Seq.d/
XXXXXXXXXXCCCATTCTATNATCGGCATCAAAAGATGGTACTATTAGATTCTACGATTA
TAAATCATCATTAAAACGTTCATTTAAATATATACAAGATACTCATGGTATACGTTCAAT
CAATTTTCATCCATGTGGTGATTTAATATTGGCTGGCACTGATCACCAAATGATTAGACT
TTACAATGTAAATACATTTCAATCATTCACAGCAAGAAAGATCAATGAACATCATCATGG
TCCAATCAACCAAGTTAGGTTCTCACTGGATGGTAATATCTTTGCAAGTTGTTCAAAAGA
TAATACAATCAAAATTTGGGATTCAAATAATTTTAGTTTAATTTCAACTTTAAATTCACC
CCATGGTGGTAAAGAACCAACTACCGTTCAAATTAGTAGGAATCAAAAAT

---ILXSASKDGTIRFYDYKSSLKRSFKYIQDTHGIRSINFHPCGDLILAGTDHQMIRLY
NVNTFQSFTARKINEHHHGPINQVRFSLDGNIFASCSKDNTIKIWDSNNFSLISTLNSPH
GGKEPTTVQISRNQK

Frame A:
---pfyxrhqkmvlldstiinhh*nvhlniykilmvyvqsifihvvi*ywlalitk*ldf
tm*ihfnhsqqersmniimvqstklgshwmvislqvvqkiiqskfgiqiilv*fql*ihp
mvvknqlpfklvgikn


Frame B:
---hsxigikrwyy*ilrl*iiiktfi*iytryswytfnqfssmw*fnigwh*spnd*tl
qckyisiihskkdq*tsswsnqps*vltgw*ylcklfkr*ynqnlgfk*f*fnfnfkftp
ww*rtnyrsn**esk


Frame C:
---ILXSASKDGTIRFYDYKSSLKRSFKYIQDTHGIRSINFHPCGDLILAGTDHQMIRLY
NVNTFQSFTARKINEHHHGPINQVRFSLDGNIFASCSKDNTIKIWDSNNFSLISTLNSPH
GGKEPTTVQISRNQK

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SFE373 (SFE373Q) /CSM/SF/SFE3-D/SFE373Q.Seq.d/                        787   0.0
SFE173 (SFE173Q) /CSM/SF/SFE1-D/SFE173Q.Seq.d/                        787   0.0
VFD426 (VFD426Q) /CSM/VF/VFD4-B/VFD426Q.Seq.d/                        702   0.0
AFB540 (AFB540Q) /CSM/AF/AFB5-B/AFB540Q.Seq.d/                        620   e-177
VSE690 (VSE690Q) /CSM/VS/VSE6-D/VSE690Q.Seq.d/                         42   0.006
SSG490 (SSG490Q) /CSM/SS/SSG4-D/SSG490Q.Seq.d/                         42   0.006
SSF701 (SSF701Q) /CSM/SS/SSF7-A/SSF701Q.Seq.d/                         42   0.006
SSC410 (SSC410Q) /CSM/SS/SSC4-A/SSC410Q.Seq.d/                         42   0.006
AHQ573 (AHQ573Q) /CSM/AH/AHQ5-D/AHQ573Q.Seq.d/                         42   0.006
AFK418 (AFK418Q) /CSM/AF/AFK4-A/AFK418Q.Seq.d/                         42   0.006

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC117176|AC117176.2 Dictyostelium discoideum chromosome 2 map 5018074-5200947 strain AX4, complete sequence.    30   9e-04  11
AC073121|AC073121.3 Homo sapiens chromosome 2 clone RP11-612F4, WORKING DRAFT SEQUENCE, 9 unordered pieces.    36   0.053  6
AC025248|AC025248.3 Homo sapiens chromosome 11 clone RP11-622F21, WORKING DRAFT SEQUENCE, 24 unordered pieces.    38   0.068  4
AE013070|AE013070.1 Thermoanaerobacter tengcongensis strain MB4T, section 97 of 244 of the complete genome.    48   0.093  1
AL354883|AL354883.14 Human DNA sequence from clone RP1-67N4 on chromosome 1.    36   0.11   6
AE014827|AE014827.1 Plasmodium falciparum 3D7 chromosome 14 section 12 of 13 of the complete sequence.    36   0.14   8
AC140153|AC140153.2 Danio rerio clone CH211-158O11 strain Tue, WORKING DRAFT SEQUENCE, 19 ordered pieces.    36   0.20   8
BB098025|BB098025.1 Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430061O05, 3' end partial sequence.    40   0.20   2
AC116924|AC116924.2 Dictyostelium discoideum chromosome 2 map 6199819-6206243 strain AX4, complete sequence.    46   0.24   2
AP005130|AP005130.4 Homo sapiens genomic DNA, chromosome 18 clone:RP11-168H23, complete sequence.    34   0.30   7

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF503433_2(AF503433|pid:none) Sorghum bicolor BAC 170F8, complet...   127   2e-28
BT034477_1(BT034477|pid:none) Zea mays full-length cDNA clone ZM...   125   6e-28
AY013246_2(AY013246|pid:none) Hordeum vulgare subsp. vulgare clo...   120   1e-26
AP008209_2667(AP008209|pid:none) Oryza sativa (japonica cultivar...   120   1e-26
BC043798_1(BC043798|pid:none) Xenopus laevis cleavage stimulatio...   119   4e-26
BT078084_1(BT078084|pid:none) Lepeophtheirus salmonis clone lsal...   117   2e-25
AF515696_1(AF515696|pid:none) Arabidopsis thaliana cleavage stim...   116   2e-25
AB008269_6(AB008269|pid:none) Arabidopsis thaliana genomic DNA, ...   116   2e-25
AB171315_1(AB171315|pid:none) Macaca fascicularis brain cDNA clo...   115   5e-25
AL121914_11(AL121914|pid:none) Human DNA sequence from clone RP5...   115   5e-25

 psg: 0.61  gvh: 0.38  alm: 0.51  top: 0.53  tms: 0.00  mit: 0.28  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: cytoplasmic
	 24.0 %: mitochondrial
	 24.0 %: nuclear
	  4.0 %: cytoskeletal
	  4.0 %: vesicles of secretory system
	  4.0 %: peroxisomal

>> prediction for SFE173 is cyt

>SFE173Z.Seq
----------CCCATTCTATNATCGGCATCAAAAGATGGTACTATTAGATTCTACGATTA
TAAATCATCATTAAAACGTTCATTTAAATATATACAAGATACTCATGGTATACGTTCAAT
CAATTTTCATCCATGTGGTGATTTAATATTGGCTGGCACTGATCACCAAATGATTAGACT
TTACAATGTAAATACATTTCAATCATTCACAGCAAGAAAGATCAATGAACATCATCATGG
TCCAATCAACCAAGTTAGGTTCTCACTGGATGGTAATATCTTTGCAAGTTGTTCAAAAGA
TAATACAATCAAAATTTGGGATTCAAATAATTTTAGTTTAATTTCAACTTTAAATTCACC
CCATGGTGGTAAAGAACCAACTACCGTTCAAATTAGTAGGAATCAAAAAT