AFI164
Library AF
(Link to library)
Clone ID AFI164
Atlas ID -
NBRP ID -
dictyBase ID -
Link to Contig Contig-U16252-1
Original site URL
Representative seq. ID AFI164P
(Link to Original site)
Representative DNA sequence
>AFI164 (AFI164Q) /CSM/AF/AFI1-C/AFI164Q.Seq.d/
ACTTTATTTTTTTTTATCTCTATCTATATATATATCATTTTTTAAAATGAGCGTCATCAA
ATCAATTAAAGCCAGAGAAATTTTAGATTCACGTGGTAACCCAACTGTTGAAGTTGACCT
TTACACCGAAAAAGATGGTGTTGTTTCATCATTCAGAGCTGCAGTTCCATCAGGTGCATC
AACTGGTATTTATGAAGCTGTTGAATTAAGAGATGGTGATAAATCAAGATACTTAGGTAA
AGGTGTACTCAAAGCAATCAAAAACATTCTCGAAGTCATTCAACCAGCCGTCATTGGTAA
ATCAGTTTCCGATCAAGCTGCTATCGATAAATTAATGATCGATCTCGATGGTACCCCAAA
TAAAGGTAAATTAGGTGCCAACGCTATCCTTGCAGTCAGTTTAGCTGTTTGCAGAGCTGG
TGCTGCTGATAGAAATTTACCACTTTACAAATATATCTCAGAAATTGCAGGTACTAAAAT
GAGATTACCAGTTCCAGCATTCAATGTTATCAATGGTGGTTCACATGCAGGTAATAAATT
AGCTATGCAAGAATTTATGATTTTACCAGTTGGTGCTAAAGATTTCAATGAAGCCTATCG
TATGGGTTCAGAAGTTTATXXXXXXXXXXATCAAAATGATTGGGAATCANACNCTNAATT
AACAGCNTCAGTTGANATTCAAATTGTTGGNGATGATTTACTTGNTACCNACCCAAAAAA
AATTAANACTGGTATTNAAAAAAAAGCATGTAANGCTNTTTTATTAAAAGTTAACCNAAT
TGGNTCAGNCNCTGAANCAATT
sequence update 2001. 6. 2
Translated Amino Acid sequence
LYFFLSLSIYISFFKMSVIKSIKAREILDSRGNPTVEVDLYTEKDGVVSSFRAAVPSGAS
TGIYEAVELRDGDKSRYLGKGVLKAIKNILEVIQPAVIGKSVSDQAAIDKLMIDLDGTPN
KGKLGANAILAVSLAVCRAGAADRNLPLYKYISEIAGTKMRLPVPAFNVINGGSHAGNKL
AMQEFMILPVGAKDFNEAYRMGSEVY---

---QNDWESXXXLTASVXIQIVGDDLLXTXPKKIXTGIXKKACXAXLLKVNXIGSXXEXI


Translated Amino Acid sequence (All Frames)
Frame A:
tlfffisiyiyiif*nerhqin*sqrnfrftw*pnc*s*plhrkrwccfiiqscssirci
nwyl*sc*ikrw**ikilr*rctqsnqkhsrshstsrhw*isfrsscyr*indrsrwypk
*r*ircqrypcsqfsclqswcc**kfttlqiylrncry*neitsssiqcyqwwftcr**i
syariydftswc*rfq*slsygfrsl---

---ikmignxtln*qxqlxfkllxmiylxptqkklxlvxkkkhvxlfy*kltxlxqxlxq

Frame B:
LYFFLSLSIYISFFKMSVIKSIKAREILDSRGNPTVEVDLYTEKDGVVSSFRAAVPSGAS
TGIYEAVELRDGDKSRYLGKGVLKAIKNILEVIQPAVIGKSVSDQAAIDKLMIDLDGTPN
KGKLGANAILAVSLAVCRAGAADRNLPLYKYISEIAGTKMRLPVPAFNVINGGSHAGNKL
AMQEFMILPVGAKDFNEAYRMGSEVY---

---sk*lgixxxinsxs*xsncwx*ftxyxpkkn*xwyxkksm*xxfiks*pnwxxx*xn

Frame C:
fiffylylyiyhflk*assnqlkpekf*ihvvtqllkltftpkkmvlfhhselqfhqvhq
lvfmklln*emvinqdt*vkvyskqsktfsksfnqpslvnqfpikllsin**sismvpqi
kvn*vptlslqsv*lfaelvllieiyhftnisqklqvlk*dyqfqhsmlsmvvhmqvin*
lcknl*fyqlvlkismkpivwvqkf---

---QNDWESXXXLTASVXIQIVGDDLLXTXPKKIXTGIXKKACXAXLLKVNXIGSXXEXI

Homology vs CSM-cDNA

Score E
Sequences producing significant alignments: (bits) Value

AFI164 (AFI164Q) /CSM/AF/AFI1-C/AFI164Q.Seq.d/ 1352 0.0
VFB851 (VFB851Q) /CSM/VF/VFB8-C/VFB851Q.Seq.d/ 1197 0.0
SSM734 (SSM734Q) /CSM/SS/SSM7-B/SSM734Q.Seq.d/ 1197 0.0
SFH339 (SFH339Q) /CSM/SF/SFH3-B/SFH339Q.Seq.d/ 1197 0.0
AFO869 (AFO869Q) /CSM/AF/AFO8-C/AFO869Q.Seq.d/ 1197 0.0
AFO860 (AFO860Q) /CSM/AF/AFO8-C/AFO860Q.Seq.d/ 1197 0.0
AFO782 (AFO782Q) /CSM/AF/AFO7-D/AFO782Q.Seq.d/ 1197 0.0
AFE445 (AFE445Q) /CSM/AF/AFE4-B/AFE445Q.Seq.d/ 1197 0.0
AFD204 (AFD204Q) /CSM/AF/AFD2-A/AFD204Q.Seq.d/ 1197 0.0
AFG235 (AFG235Q) /CSM/AF/AFG2-B/AFG235Q.Seq.d/ 1189 0.0

own update 2004.12.25
Homology vs DNA

Score E
Sequences producing significant alignments: (bits) Value N

BI504877|BI504877.1 BB170011A20G10.5 Bee Brain Normalized/Subtracted Library, BB17 Apismellifera cDNA clone BB170011A20G10 5', mRNA sequence. 125 6e-31 2
BD183626|BD183626.1 Material for diagnosing malaria and immune antigen for suppressing growth of plasmodium. 62 1e-29 6
BD183625|BD183625.1 Material for diagnosing malaria and immune antigen for suppressing growth of plasmodium. 62 1e-29 6
AB026051|AB026051.1 Plasmodium falciparum mRNA for enolase, complete cds. 62 1e-29 6
U00152|U00152.1 Plasmodium falciparum enolase gene complete cds. 62 8e-28 5
AX619982|AX619982.1 Sequence 2945 from Patent WO02094868. 50 2e-27 6
AX932030|AX932030.1 Sequence 13 from Patent WO03087352. 50 2e-27 6
AX932021|AX932021.1 Sequence 4 from Patent WO03087352. 50 2e-27 6
BD237140|BD237140.1 Staphylococcus aureus gene and polypeptide. 50 4e-27 6
AR282358|AR282358.1 Sequence 21 from patent US 6521441. 50 4e-27 6
dna update 2004. 6.23
Homology vs Protein

Score E
Sequences producing significant alignments: (bits) Value

(Q54RK5) RecName: Full=Enolase A; EC=4.2.1.11; AltName:... 368 e-100
EF137905_1(EF137905|pid:none) Helianthus annuus plastid enolase ... 261 2e-68
BC045082_1(BC045082|pid:none) Xenopus laevis enolase 3, beta mus... 261 2e-68
BC096516_1(BC096516|pid:none) Xenopus tropicalis hypothetical pr... 260 4e-68
AC016662_10(AC016662|pid:none) Arabidopsis thaliana chromosome 1... 259 9e-68
DQ497989_1(DQ497989|pid:none) Typhlonectes natans enolase B mRNA... 258 1e-67
AK290525_1(AK290525|pid:none) Homo sapiens cDNA FLJ77877 complet... 257 3e-67
(P09104) RecName: Full=Gamma-enolase; EC=4.2.1.11; AltN... 257 3e-67
CR859195_1(CR859195|pid:none) Pongo abelii mRNA; cDNA DKFZp459B1... 257 3e-67
BC017249_1(BC017249|pid:none) Homo sapiens enolase 3 (beta, musc... 256 4e-67
protein update 2009. 4.22
PSORT

psg: 0.93 gvh: 0.46 alm: 0.33 top: 0.60 tms: 0.00 mit: 0.34 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

36.0 %: cytoplasmic
36.0 %: nuclear
16.0 %: mitochondrial
4.0 %: cytoskeletal
4.0 %: vesicles of secretory system
4.0 %: endoplasmic reticulum

>> prediction for AFI164 is cyt

5' end seq. ID AFI164F
5' end seq.
>AFI164F.Seq
ACTTTATTTTTTTTTATCTCTATCTATATATATATCATTTTTTAAAATGAGCGTCATCAA
ATCAATTAAAGCCAGAGAAATTTTAGATTCACGTGGTAACCCAACTGTTGAAGTTGACCT
TTACACCGAAAAAGATGGTGTTGTTTCATCATTCAGAGCTGCAGTTCCATCAGGTGCATC
AACTGGTATTTATGAAGCTGTTGAATTAAGAGATGGTGATAAATCAAGATACTTAGGTAA
AGGTGTACTCAAAGCAATCAAAAACATTCTCGAAGTCATTCAACCAGCCGTCATTGGTAA
ATCAGTTTCCGATCAAGCTGCTATCGATAAATTAATGATCGATCTCGATGGTACCCCAAA
TAAAGGTAAATTAGGTGCCAACGCTATCCTTGCAGTCAGTTTAGCTGTTTGCAGAGCTGG
TGCTGCTGATAGAAATTTACCACTTTACAAATATATCTCAGAAATTGCAGGTACTAAAAT
GAGATTACCAGTTCCAGCATTCAATGTTATCAATGGTGGTTCACATGCAGGTAATAAATT
AGCTATGCAAGAATTTATGATTTTACCAGTTGGTGCTAAAGATTTCAATGAAGCCTATCG
TATGGGTTCAGAAGTTTAT----------
Length of 5' end seq. 619
3' end seq. ID AFI164Z
3' end seq.
>AFI164Z.Seq
----------ATCAAAATGATTGGGAATCANACNCTNAATTAACAGCNTCAGTTGANATT
CAAATTGTTGGNGATGATTTACTTGNTACCNACCCAAAAAAAATTAANACTGGTATTNAA
AAAAAAGCATGTAANGCTNTTTTATTAAAAGTTAACCNAATTGGNTCAGNCNCTGAANCA
ATT
Length of 3' end seq. 173
Connected seq. ID AFI164P
Connected seq.
>AFI164P.Seq
ACTTTATTTTTTTTTATCTCTATCTATATATATATCATTTTTTAAAATGAGCGTCATCAA
ATCAATTAAAGCCAGAGAAATTTTAGATTCACGTGGTAACCCAACTGTTGAAGTTGACCT
TTACACCGAAAAAGATGGTGTTGTTTCATCATTCAGAGCTGCAGTTCCATCAGGTGCATC
AACTGGTATTTATGAAGCTGTTGAATTAAGAGATGGTGATAAATCAAGATACTTAGGTAA
AGGTGTACTCAAAGCAATCAAAAACATTCTCGAAGTCATTCAACCAGCCGTCATTGGTAA
ATCAGTTTCCGATCAAGCTGCTATCGATAAATTAATGATCGATCTCGATGGTACCCCAAA
TAAAGGTAAATTAGGTGCCAACGCTATCCTTGCAGTCAGTTTAGCTGTTTGCAGAGCTGG
TGCTGCTGATAGAAATTTACCACTTTACAAATATATCTCAGAAATTGCAGGTACTAAAAT
GAGATTACCAGTTCCAGCATTCAATGTTATCAATGGTGGTTCACATGCAGGTAATAAATT
AGCTATGCAAGAATTTATGATTTTACCAGTTGGTGCTAAAGATTTCAATGAAGCCTATCG
TATGGGTTCAGAAGTTTAT----------ATCAAAATGATTGGGAATCANACNCTNAATT
AACAGCNTCAGTTGANATTCAAATTGTTGGNGATGATTTACTTGNTACCNACCCAAAAAA
AATTAANACTGGTATTNAAAAAAAAGCATGTAANGCTNTTTTATTAAAAGTTAACCNAAT
TGGNTCAGNCNCTGAANCAATT
Length of connected seq. 792
Full length Seq ID -
Full length Seq. -
Length of full length seq. -