SFC432
Library SF
(Link to library)
Clone ID SFC432
Atlas ID -
NBRP ID -
dictyBase ID -
Link to Contig Contig-U16252-1
Original site URL
Representative seq. ID SFC432P
(Link to Original site)
Representative DNA sequence
>SFC432 (SFC432Q) /CSM/SF/SFC4-B/SFC432Q.Seq.d/
ATTTTTTTTTATCTCTATCTATATATATATCATTTTTTAAAATGAGCGTCATCAAATCAA
TTAAAGCCAGAGAAATTTTAGATTCACGTGGTAACCCAACTGTTGAAGTTGACCTTTACA
CCGAAAAAGATGGTGTTGTTTCATCATTCAGAGCTGCAGTTCCATCAGGTGCATCAACTG
GTATTTATGAAGCTGTTGAATTAAGAGATGGTGATAAATCAAGATACTTAGGTAAAGGTG
TACTCAAAGCAATCAAAAACATTCTCGAAGTCATTCAACCAGCCGTCATTGGTAAATCAG
TTTCCGATCAAGCTGCTATCGATAAATTAATGATCGATCTCGATGGTACCCCAAATAAAG
GTAAATTAGGTGCCAACGCTATCCTTGCAGTCAGTTTAGCTGTTTGCAGAGCTGGTGCTG
CTGATAGAAATTTACCACTTTACAAATATATCTCAGAAATTGCAGGTACTAAAATGAGAT
TACCAGTTCCAGCATTCAATGTTATCAATGGTGGTTCACATGCAGGTAATXXXXXXXXXX
ACTTGCCATTGAAAAAGCTGGTTACACAGGTTTAGTTAAAATTGGTATGGATTGTGCTGC
CTCTGAATTCAAAGTTGAAAATGGTTACGATCTTGACTTCAAAACTAAAAACAATGACGG
TTCAGCTGTTATCTCTGGTGAAAAATTAGGTGATCTCTACAGAGAATTCATTAAAGAATA
TCCAATCATTTCAATTGAAGATCCATTTGATCAAGATGATTGGGAATCATACACTAAATT
AACAGCATCAGTTGATATTCAAATTGTTGGTGATGATTTACTTGTTACCAACCCAGAAAG
AATTAAGACTGGTATTGAAAAGAAAGCATGTAATGCTCTTTTATTAAAAGTTAACCAAAT
TGGTTCAGTCACTGAATCAATTCGTGCCGCTCTTGACTCAAAGAATGCATCATGGGGTGT
CATGGTTAGCCATCGTTCAGGTGAAACTGAAGATACCTTCATTGCTGATTTAGTTGTTGG
TTTAGGTACTGGTCAAATTAAAACTGGTGCTCCATGTAGATCAGAAAGATTAGCCAAATA
CAATCAACTTGTTAGAATTAACGAAGAGTTAGGTGAAAACCATAACTATGCTGGTTTAAC
TTTCCGTAAATTTTAATTTTACTCATAATATGNAAACAAAAC
sequence update 2001. 6. 1
Translated Amino Acid sequence
FFLSLSIYISFFKMSVIKSIKAREILDSRGNPTVEVDLYTEKDGVVSSFRAAVPSGASTG
IYEAVELRDGDKSRYLGKGVLKAIKNILEVIQPAVIGKSVSDQAAIDKLMIDLDGTPNKG
KLGANAILAVSLAVCRAGAADRNLPLYKYISEIAGTKMRLPVPAFNVINGGSHAGN---

---LAIEKAGYTGLVKIGMDCAASEFKVENGYDLDFKTKNNDGSAVISGEKLGDLYREFI
KEYPIISIEDPFDQDDWESYTKLTASVDIQIVGDDLLVTNPERIKTGIEKKACNALLLKV
NQIGSVTESIRAALDSKNASWGVMVSHRSGETEDTFIADLVVGLGTGQIKTGAPCRSERL
AKYNQLVRINEELGENHNYAGLTFRKF*fys*yxnk


Translated Amino Acid sequence (All Frames)
Frame A:
iffylylyiyhflk*assnqlkpekf*ihvvtqllkltftpkkmvlfhhselqfhqvhql
vfmklln*emvinqdt*vkvyskqsktfsksfnqpslvnqfpikllsin**sismvpqik
vn*vptlslqsv*lfaelvllieiyhftnisqklqvlk*dyqfqhsmlsmvvhmqv---

---tch*kswlhrfs*nwyglccl*iqs*kwlrs*lqn*kq*rfscylw*kir*slqrih
*risnhfn*rsi*sr*lgiih*insis*ysncw**ftcyqprkn*dwy*kesm*csfiks
*pnwfsh*inscrs*lkecimgchg*psfr*n*rylhc*fscwfrywsn*nwcsm*irki
sqiqstc*n*rrvr*kp*lcwfnfp*ililliixkqn

Frame B:
fffisiyiyiif*nerhqin*sqrnfrftw*pnc*s*plhrkrwccfiiqscssircinw
yl*sc*ikrw**ikilr*rctqsnqkhsrshstsrhw*isfrsscyr*indrsrwypk*r
*ircqrypcsqfsclqswcc**kfttlqiylrncry*neitsssiqcyqwwftcr*---

---LAIEKAGYTGLVKIGMDCAASEFKVENGYDLDFKTKNNDGSAVISGEKLGDLYREFI
KEYPIISIEDPFDQDDWESYTKLTASVDIQIVGDDLLVTNPERIKTGIEKKACNALLLKV
NQIGSVTESIRAALDSKNASWGVMVSHRSGETEDTFIADLVVGLGTGQIKTGAPCRSERL
AKYNQLVRINEELGENHNYAGLTFRKF*fys*yxnk

Frame C:
FFLSLSIYISFFKMSVIKSIKAREILDSRGNPTVEVDLYTEKDGVVSSFRAAVPSGASTG
IYEAVELRDGDKSRYLGKGVLKAIKNILEVIQPAVIGKSVSDQAAIDKLMIDLDGTPNKG
KLGANAILAVSLAVCRAGAADRNLPLYKYISEIAGTKMRLPVPAFNVINGGSHAGN---

---lplkklvtqv*lklvwivlplnsklkmvtiltsklktmtvqllslvkn*vistensl
kniqsfqlkihlikmignhtln*qhqlifkllvmiyllptqkelrlvlkrkhvmlfy*kl
tklvqslnqfvplltqrmhhgvswlaivqvklkipslli*llv*vlvklklvlhvdqkd*
pntinlleltks*vktitmlv*lsvnfnfthnmxtk

Homology vs CSM-cDNA

Score E
Sequences producing significant alignments: (bits) Value

SFC432 (SFC432Q) /CSM/SF/SFC4-B/SFC432Q.Seq.d/ 2258 0.0
VFE233 (VFE233Q) /CSM/VF/VFE2-B/VFE233Q.Seq.d/ 1267 0.0
SFE744 (SFE744Q) /CSM/SF/SFE7-B/SFE744Q.Seq.d/ 1267 0.0
CHB226 (CHB226Q) /CSM/CH/CHB2-B/CHB226Q.Seq.d/ 1267 0.0
AFK881 (AFK881Q) /CSM/AF/AFK8-D/AFK881Q.Seq.d/ 1267 0.0
AFH824 (AFH824Q) /CSM/AF/AFH8-A/AFH824Q.Seq.d/ 1267 0.0
AFG692 (AFG692Q) /CSM/AF/AFG6-D/AFG692Q.Seq.d/ 1267 0.0
SFC169 (SFC169Q) /CSM/SF/SFC1-C/SFC169Q.Seq.d/ 1265 0.0
AFC723 (AFC723Q) /CSM/AF/AFC7-A/AFC723Q.Seq.d/ 1259 0.0
VFL491 (VFL491Q) /CSM/VF/VFL4-D/VFL491Q.Seq.d/ 1253 0.0

own update 2004.12.25
Homology vs DNA

Score E
Sequences producing significant alignments: (bits) Value N

X80474|X80474.1 N.frontalis enolase gene. 64 4e-56 9
BD183626|BD183626.1 Material for diagnosing malaria and immune antigen for suppressing growth of plasmodium. 76 5e-50 9
BD183625|BD183625.1 Material for diagnosing malaria and immune antigen for suppressing growth of plasmodium. 76 5e-50 9
AB026051|AB026051.1 Plasmodium falciparum mRNA for enolase, complete cds. 76 5e-50 9
U00152|U00152.1 Plasmodium falciparum enolase gene complete cds. 76 5e-48 8
Y17298|Y17298.1 Cunninghamella elegans mRNA for enolase. 60 1e-44 9
BM395755|BM395755.1 5009-0-10-H08.t.1 Chilcoat/Turkewitz cDNA (large fraction) Tetrahymena thermophila cDNA, mRNA sequence. 121 1e-39 4
BI504105|BI504105.1 BB170030B20E01 Bee Brain Normalized/Subtracted Library, BB17 Apis mellifera cDNA clone BB170030B20E01 5', mRNA sequence. 88 1e-37 4
BM165201|BM165201.1 EST567724 PyBS Plasmodium yoelii yoelii cDNA clone PYCMI87 5' end, mRNA sequence. 92 7e-37 4
AX619982|AX619982.1 Sequence 2945 from Patent WO02094868. 50 8e-37 8
dna update 2003.12.21
Homology vs Protein

Score E
Sequences producing significant alignments: (bits) Value

Z68318_5(Z68318|pid:none) Caenorhabditis elegans Cosmid T21B10, ... 270 e-116
(Q54RK5) RecName: Full=Enolase A; EC=4.2.1.11; AltName:... 408 e-112
EF137905_1(EF137905|pid:none) Helianthus annuus plastid enolase ... 305 3e-81
AF100985_1(AF100985|pid:none) Penaeus monodon phosphopyruvate hy... 301 4e-80
AC016662_10(AC016662|pid:none) Arabidopsis thaliana chromosome 1... 298 2e-79
EU964132_1(EU964132|pid:none) Zea mays clone 276124 enolase mRNA... 297 4e-79
AK243111_1(AK243111|pid:none) Oryza sativa Japonica Group cDNA, ... 293 6e-78
T12341(T12341) phosphopyruvate hydratase (EC 4.2.1.11) - common ... 293 6e-78
(Q43130) RecName: Full=Enolase; EC=4.2.1.11; AltName: F... 293 1e-77
(P26300) RecName: Full=Enolase; EC=4.2.1.11; AltName: F... 292 1e-77
protein update 2009. 5.22
PSORT

psg: 0.93 gvh: 0.46 alm: 0.33 top: 0.60 tms: 0.00 mit: 0.34 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

32.0 %: cytoplasmic
32.0 %: mitochondrial
20.0 %: nuclear
4.0 %: extracellular, including cell wall
4.0 %: cytoskeletal
4.0 %: endoplasmic reticulum
4.0 %: peroxisomal

>> prediction for SFC432 is cyt

5' end seq. ID SFC432F
5' end seq.
>SFC432F.Seq
ATTTTTTTTTATCTCTATCTATATATATATCATTTTTTAAAATGAGCGTCATCAAATCAA
TTAAAGCCAGAGAAATTTTAGATTCACGTGGTAACCCAACTGTTGAAGTTGACCTTTACA
CCGAAAAAGATGGTGTTGTTTCATCATTCAGAGCTGCAGTTCCATCAGGTGCATCAACTG
GTATTTATGAAGCTGTTGAATTAAGAGATGGTGATAAATCAAGATACTTAGGTAAAGGTG
TACTCAAAGCAATCAAAAACATTCTCGAAGTCATTCAACCAGCCGTCATTGGTAAATCAG
TTTCCGATCAAGCTGCTATCGATAAATTAATGATCGATCTCGATGGTACCCCAAATAAAG
GTAAATTAGGTGCCAACGCTATCCTTGCAGTCAGTTTAGCTGTTTGCAGAGCTGGTGCTG
CTGATAGAAATTTACCACTTTACAAATATATCTCAGAAATTGCAGGTACTAAAATGAGAT
TACCAGTTCCAGCATTCAATGTTATCAATGGTGGTTCACATGCAGGTAAT----------
Length of 5' end seq. 530
3' end seq. ID SFC432Z
3' end seq.
>SFC432Z.Seq
----------ACTTGCCATTGAAAAAGCTGGTTACACAGGTTTAGTTAAAATTGGTATGG
ATTGTGCTGCCTCTGAATTCAAAGTTGAAAATGGTTACGATCTTGACTTCAAAACTAAAA
ACAATGACGGTTCAGCTGTTATCTCTGGTGAAAAATTAGGTGATCTCTACAGAGAATTCA
TTAAAGAATATCCAATCATTTCAATTGAAGATCCATTTGATCAAGATGATTGGGAATCAT
ACACTAAATTAACAGCATCAGTTGATATTCAAATTGTTGGTGATGATTTACTTGTTACCA
ACCCAGAAAGAATTAAGACTGGTATTGAAAAGAAAGCATGTAATGCTCTTTTATTAAAAG
TTAACCAAATTGGTTCAGTCACTGAATCAATTCGTGCCGCTCTTGACTCAAAGAATGCAT
CATGGGGTGTCATGGTTAGCCATCGTTCAGGTGAAACTGAAGATACCTTCATTGCTGATT
TAGTTGTTGGTTTAGGTACTGGTCAAATTAAAACTGGTGCTCCATGTAGATCAGAAAGAT
TAGCCAAATACAATCAACTTGTTAGAATTAACGAAGAGTTAGGTGAAAACCATAACTATG
CTGGTTTAACTTTCCGTAAATTTTAATTTTACTCATAATATGNAAACAAAAC
Length of 3' end seq. 642
Connected seq. ID SFC432P
Connected seq.
>SFC432P.Seq
ATTTTTTTTTATCTCTATCTATATATATATCATTTTTTAAAATGAGCGTCATCAAATCAA
TTAAAGCCAGAGAAATTTTAGATTCACGTGGTAACCCAACTGTTGAAGTTGACCTTTACA
CCGAAAAAGATGGTGTTGTTTCATCATTCAGAGCTGCAGTTCCATCAGGTGCATCAACTG
GTATTTATGAAGCTGTTGAATTAAGAGATGGTGATAAATCAAGATACTTAGGTAAAGGTG
TACTCAAAGCAATCAAAAACATTCTCGAAGTCATTCAACCAGCCGTCATTGGTAAATCAG
TTTCCGATCAAGCTGCTATCGATAAATTAATGATCGATCTCGATGGTACCCCAAATAAAG
GTAAATTAGGTGCCAACGCTATCCTTGCAGTCAGTTTAGCTGTTTGCAGAGCTGGTGCTG
CTGATAGAAATTTACCACTTTACAAATATATCTCAGAAATTGCAGGTACTAAAATGAGAT
TACCAGTTCCAGCATTCAATGTTATCAATGGTGGTTCACATGCAGGTAAT----------
ACTTGCCATTGAAAAAGCTGGTTACACAGGTTTAGTTAAAATTGGTATGGATTGTGCTGC
CTCTGAATTCAAAGTTGAAAATGGTTACGATCTTGACTTCAAAACTAAAAACAATGACGG
TTCAGCTGTTATCTCTGGTGAAAAATTAGGTGATCTCTACAGAGAATTCATTAAAGAATA
TCCAATCATTTCAATTGAAGATCCATTTGATCAAGATGATTGGGAATCATACACTAAATT
AACAGCATCAGTTGATATTCAAATTGTTGGTGATGATTTACTTGTTACCAACCCAGAAAG
AATTAAGACTGGTATTGAAAAGAAAGCATGTAATGCTCTTTTATTAAAAGTTAACCAAAT
TGGTTCAGTCACTGAATCAATTCGTGCCGCTCTTGACTCAAAGAATGCATCATGGGGTGT
CATGGTTAGCCATCGTTCAGGTGAAACTGAAGATACCTTCATTGCTGATTTAGTTGTTGG
TTTAGGTACTGGTCAAATTAAAACTGGTGCTCCATGTAGATCAGAAAGATTAGCCAAATA
CAATCAACTTGTTAGAATTAACGAAGAGTTAGGTGAAAACCATAACTATGCTGGTTTAAC
TTTCCGTAAATTTTAATTTTACTCATAATATGNAAACAAAAC
Length of connected seq. 1172
Full length Seq ID -
Full length Seq. -
Length of full length seq. -