>SFC234 (SFC234Q) /CSM/SF/SFC2-B/SFC234Q.Seq.d/
XXXXXXXXXXAAATGTGATNATGCATCAGATTGTGAATATGGCTCAACTTGTAGTAACAG
TTTATGTGTACCATTACGTAAACAAGGTGAATCATGTGATTCAATGAAAGGTGAAACATG
CATTTACGGCCTCTCCTGTCTCTCCAACTCTACCTGTGGTCCATTATTCTCAAAAACCAT
TAGGTGCATCATGTCTAATGGATGATGATTGTAATCAACCTGAAAATTTATATTGTTCAC
AAAAATCACATTTATGTGAAGAATATGTTCAACCAAAACAACCAACAACAAATTGTAGTT
TAACTGAAAATTCATGTGACCAATTCCATGAATGCTCATGTGATGGTAAATGTTACCAAA
GTTCACCATTCCCAACCCAAGTTACAAGTGGTATGCAACCATTAGTTAATTGTGTTTTAA
AGAATAAATGTACATGGGTAACAAACTTTTTCTCATCTGATAGTTGTATAACTAAAAATT
GTGCTTCTGAACTTTGTAAATATAATGGTGTCACAATTATGAATAATGCTTTAACATGTG
GTAATAATCATCAATCAAATATTTATTGTGCTGATTCAAATTCAGTTTCAAGAATTAATA
TTAACAATTCAATGTTATTATTATTATTATTATNCTATTTTATTATTTTTATTTTTAAAA
AAAAA

---nvxmhqivnmaqlvvtvyvyhyvnkvnhviq*KVKHAFTASPVSPTLPVVHYSQKPL
GASCLMDDDCNQPENLYCSQKSHLCEEYVQPKQPTTNCSLTENSCDQFHECSCDGKCYQS
SPFPTQVTSGMQPLVNCVLKNKCTWVTNFFSSDSCITKNCASELCKYNGVTIMNNALTCG
NNHQSNIYCADSNSVSRININNSMLLLLLLXYFIIFIFKKK

Frame A:
---nvxmhqivnmaqlvvtvyvyhyvnkvnhviq*KVKHAFTASPVSPTLPVVHYSQKPL
GASCLMDDDCNQPENLYCSQKSHLCEEYVQPKQPTTNCSLTENSCDQFHECSCDGKCYQS
SPFPTQVTSGMQPLVNCVLKNKCTWVTNFFSSDSCITKNCASELCKYNGVTIMNNALTCG
NNHQSNIYCADSNSVSRININNSMLLLLLLXYFIIFIFKKK


Frame B:
---m*xcirl*iwlnl**qfmctit*tr*im*fner*nmhlrpllslqlylwsiilknh*
vhhv*wmmivinlkiyivhknhiyvknmfnqnnqqqivv*lkihvtnsmnahvmvnvtkv
hhsqpklqvvcnh*livf*rinvhg*qtfshlivv*lkivllnfvnimvsql*iml*hvv
iiinqifivliqiqfqeliltiqcyyyyyyxillflflkk


Frame C:
---cdxasdceygstcsnslcvplrkqgescdsmkgetciyglsclsnstcgplfsktir
cimsng**l*st*kfilftkitfm*ricstkttnnkl*fn*kfm*pip*mlm*w*mlpkf
tipnpsykwyatis*lcfke*mymgnklfli**lyn*klcf*tl*i*wchnye*cfnmw*
*ssikyllc*fkfsfkn*y*qfnviiiiixlfyyfyf*kk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SFC234 (SFC234Q) /CSM/SF/SFC2-B/SFC234Q.Seq.d/                       1191   0.0
CFB371 (CFB371Q) /CSM/CF/CFB3-C/CFB371Q.Seq.d/                       1176   0.0
SFI584 (SFI584Q) /CSM/SF/SFI5-D/SFI584Q.Seq.d/                       1170   0.0
VFM526 (VFM526Q) /CSM/VF/VFM5-B/VFM526Q.Seq.d/                       1168   0.0
VFI719 (VFI719Q) /CSM/VF/VFI7-A/VFI719Q.Seq.d/                       1168   0.0
VFK720 (VFK720Q) /CSM/VF/VFK7-A/VFK720Q.Seq.d/                       1164   0.0
SFI257 (SFI257Q) /CSM/SF/SFI2-C/SFI257Q.Seq.d/                       1154   0.0
VFI819 (VFI819Q) /CSM/VF/VFI8-A/VFI819Q.Seq.d/                        831   0.0
VFB550 (VFB550Q) /CSM/VF/VFB5-C/VFB550Q.Seq.d/                        617   e-176
SSL409 (SSL409Q) /CSM/SS/SSL4-A/SSL409Q.Seq.d/                        496   e-139

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC128211|AC128211.2 Rattus norvegicus clone CH230-34L7, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces.    40   0.017  4
AL353811|AL353811.12 Human DNA sequence from clone RP11-482I10 on chromosome 9 Contains  STSs and GSSs.    44   0.027  7
AC134235|AC134235.2 Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0030J04, complete sequence.    44   0.029  7
AL731633|AL731633.2 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0096E05.    44   0.038  3
AC097074|AC097074.5 Rattus norvegicus clone CH230-43O14, *** SEQUENCING IN PROGRESS ***, 1 ordered piece.    40   0.10   3
BX510655|BX510655.3 Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone.    32   0.21   10
AC134099|AC134099.2 Homo sapiens clone RP11-221B6, *** SEQUENCING IN PROGRESS ***, 22 unordered pieces.    36   0.23   8
AC146522|AC146522.2 Oryza sativa chromosome 11 BAC clone OSJNBa0039A07, complete sequence.    44   0.27   8
AC138917|AC138917.2 Homo sapiens chromosome 5 clone RP11-630I7, complete sequence.    34   0.28   7
AC022248|AC022248.2 Homo sapiens clone RP11-23J7, WORKING DRAFT SEQUENCE, 13 unordered pieces.    38   0.29   6

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB079253_1(AB079253|pid:none) Dictyostelium discoideum Dd-gdcA m...    53   7e-06
AC116977_110(AC116977|pid:none) Dictyostelium discoideum chromos...    47   3e-05
T29764(T29764)hypothetical protein T21E3.3 - Caenorhabditis eleg...    41   0.027
EF066645_1(EF066645|pid:none) Trichinella spiralis clone T42B12 ...    41   0.035
AF275314_1(AF275314|pid:none) Trichosurus vulpecula whey acidic ...    39   0.10
AC115680_32(AC115680|pid:none) Dictyostelium discoideum chromoso...    39   0.10
(Q9N0L8) RecName: Full=Whey acidic protein; AltName: Full=tWAP; ...    39   0.10
AC115680_25(AC115680|pid:none) Dictyostelium discoideum chromoso...    39   0.17
AM910990_169(AM910990|pid:none) Plasmodium knowlesi strain H chr...    38   0.23
(Q19673) RecName: Full=Putative tyrosinase-like protein tyr-3; F...    37   0.66

 psg: 0.88  gvh: 0.42  alm: 0.23  top: 0.70  tms: 0.07  mit: 0.31  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.40  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 1.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 24.0 %: cytoplasmic
	 20.0 %: nuclear
	 16.0 %: vesicles of secretory system
	 12.0 %: mitochondrial
	  8.0 %: Golgi
	  8.0 %: endoplasmic reticulum
	  4.0 %: extracellular, including cell wall
	  4.0 %: cytoskeletal
	  4.0 %: plasma membrane

>> prediction for SFC234 is cyt

>SFC234Z.Seq
----------AAATGTGATNATGCATCAGATTGTGAATATGGCTCAACTTGTAGTAACAG
TTTATGTGTACCATTACGTAAACAAGGTGAATCATGTGATTCAATGAAAGGTGAAACATG
CATTTACGGCCTCTCCTGTCTCTCCAACTCTACCTGTGGTCCATTATTCTCAAAAACCAT
TAGGTGCATCATGTCTAATGGATGATGATTGTAATCAACCTGAAAATTTATATTGTTCAC
AAAAATCACATTTATGTGAAGAATATGTTCAACCAAAACAACCAACAACAAATTGTAGTT
TAACTGAAAATTCATGTGACCAATTCCATGAATGCTCATGTGATGGTAAATGTTACCAAA
GTTCACCATTCCCAACCCAAGTTACAAGTGGTATGCAACCATTAGTTAATTGTGTTTTAA
AGAATAAATGTACATGGGTAACAAACTTTTTCTCATCTGATAGTTGTATAACTAAAAATT
GTGCTTCTGAACTTTGTAAATATAATGGTGTCACAATTATGAATAATGCTTTAACATGTG
GTAATAATCATCAATCAAATATTTATTGTGCTGATTCAAATTCAGTTTCAAGAATTAATA
TTAACAATTCAATGTTATTATTATTATTATTATNCTATTTTATTATTTTTATTTTTAAAA
AAAAA