>SFC216 (SFC216Q) /CSM/SF/SFC2-A/SFC216Q.Seq.d/
AAAAACATTTTCATTTTCATCAAAATTCTAATCAGATAATAATTAAAAAATAAAAATGGA
AACAATAAATAATAGAAATCCACAAGAAATTAATACCAATGAAACTATGATCGAAAATCC
AAAAGATAAAGTTTCAAATAATAATTTTATTCCTAAATTAAATTTAAATAATAATAATTT
AAATAAAATTAATCAACCAGGTGATTCTGAGACATTAGATAATCGTAGTAATCCATCCTC
TCCAATTGAATCACCACTTTCAACTGCAAGAATTTCATCTTCACATAATATTTTGTTTAA
AACTAGAGGTTATTATTTTATTAAACCAATTAGCAAAGGTGGATATGGTCAAGTATTTTT
AGCCATTACCAAATCAAATAAATTCTTTGCCATCAAATCAATTAACAAACGTGATACAAT
TGGAAAACATATGGTTAAAGAATTGATGGTTGAAAGAAATATATTAGTTCAATACCAAAA
CCAGTCAATTGTAAAATTATTTGAATGTTTTCAAACAAAAAAAAAACTTTATATGGTTAT
GGAGTTTTTACATGGXXXXXXXXXXCTAAAAATATTATTGCTCAAATTGTTAATGGTTTA
GAATTTATTCATAGTTGTGGTATCATTCATAGAGATTTAAAAGTTGAAAATTTAATTTTT
GATAAAAACGGAATTATCAAAATTGTTGATTTTGGTTTTTCTGAAGTTGGTTTCACCGGT
AATAGTATTAAAAATGGAAATAAAAAAAATAACAAATGTTTGGGAACACCTTACTACATG
TCTCCAGAAGTAATTAATAAACGTGGATATGGTAAAACTATTGACTGGTGGGCATTGGGT
ATCATCATTTTTGAATTGTTAAGTGGTGAAACCCCATTCGTTGGTGATAATCAAAATATG
ATTTTTGAAAAAATCACTAACTATACAAATGAAATAAATTTTCCATCTTATTTTTCTGAA
GTTGCAATTGATTTAATTCAAAAATTATTACAAGTAGATCCATTAAAGAGATTAGGTGCA
AATGGTGCTGATGAAGTTAAAAGACATCCATTCTTTAATGGAGTAAATTGGAGTAAAATT
TATTCTCCAGAATCTTTGACATTCAAGCCAAAAATAGAAAATGAATATGATTCCAGTTAT
TTTTTTGAAAGAGAAAATGTTAAAAAAACAGTTTCTGCTAAAAAAACAAACAACAAAAAA
CCAATTAAAAGATACCTTTTCAAAGGTTTCAATTTTAAAAAAAATTAACCAAATCAAACA
AATCATTATTTAAAACCTCTATTTATTAAAAATCTGCAAGTG

ktfsfsskf*sdnn*KIKMETINNRNPQEINTNETMIENPKDKVSNNNFIPKLNLNNNNL
NKINQPGDSETLDNRSNPSSPIESPLSTARISSSHNILFKTRGYYFIKPISKGGYGQVFL
AITKSNKFFAIKSINKRDTIGKHMVKELMVERNILVQYQNQSIVKLFECFQTKKKLYMVM
EFLH---

---KNIIAQIVNGLEFIHSCGIIHRDLKVENLIFDKNGIIKIVDFGFSEVGFTGNSIKNG
NKKNNKCLGTPYYMSPEVINKRGYGKTIDWWALGIIIFELLSGETPFVGDNQNMIFEKIT
NYTNEINFPSYFSEVAIDLIQKLLQVDPLKRLGANGADEVKRHPFFNGVNWSKIYSPESL
TFKPKIENEYDSSYFFERENVKKTVSAKKTNNKKPIKRYLFKGFNFKKN*pnqtnhylkp
lfiknlqv

Frame A:
knififikilir**lknkngnnk**kstrn*yq*nydrkskr*sfk**fys*ikfk***f
k*n*str*f*dir*s**silsn*ittfncknfift*yfv*n*rllfy*tn*qrwiwssif
shyqik*ilchqin*qt*ynwktyg*ridg*kkyissipkpvnckii*mfsnkkktlygy
gvftw---

---lkilllkllmv*nlfivvvsfiei*klki*fliktelskllilvflklvspvivlkm
eikkitnvwehlttclqk*linvdmvklltgghwvssflnc*vvkphslviiki*flkks
ltiqmk*ifhliflklqli*fknyyk*ih*rd*vqmvlmklkdihslme*igvkfilqnl
*hssqk*kmnmipviflkekmlkkqfllkkqttknqlkdtfskvsilkkinqikqiii*n
lyllkick

Frame B:
ktfsfsskf*sdnn*KIKMETINNRNPQEINTNETMIENPKDKVSNNNFIPKLNLNNNNL
NKINQPGDSETLDNRSNPSSPIESPLSTARISSSHNILFKTRGYYFIKPISKGGYGQVFL
AITKSNKFFAIKSINKRDTIGKHMVKELMVERNILVQYQNQSIVKLFECFQTKKKLYMVM
EFLH---

---*kyycsnc*wfriys*lwyhs*rfks*kfnf**krnyqnc*fwff*swfhr**y*kw
k*kk*qmfgntllhvsrsn**twiw*ny*lvgigyhhf*ivkw*npirw**skydf*knh
*lyk*nkfsilff*scn*fnskiitsrsikeirckwc**s*ktsil*wskle*nlfsrif
diqaknrk*i*fqlff*krkc*knsfc*knkqqktn*kipfqrfqf*kkltksnkslfkt
siy*ksas

Frame C:
khfhfhqnsnqiiikk*kwkq*iieihkklipmkl*skiqkikfqiiilfln*i*iiii*
iklinqvilrh*iivvihplqlnhhfqlqefhlhiifclkleviillnqlakvdmvkyf*
plpnqinslpsnqltnviqleniwlkn*wlkeiy*fntktsql*nylnvfkqkknfiwlw
sfym---

---KNIIAQIVNGLEFIHSCGIIHRDLKVENLIFDKNGIIKIVDFGFSEVGFTGNSIKNG
NKKNNKCLGTPYYMSPEVINKRGYGKTIDWWALGIIIFELLSGETPFVGDNQNMIFEKIT
NYTNEINFPSYFSEVAIDLIQKLLQVDPLKRLGANGADEVKRHPFFNGVNWSKIYSPESL
TFKPKIENEYDSSYFFERENVKKTVSAKKTNNKKPIKRYLFKGFNFKKN*pnqtnhylkp
lfiknlqv

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SFC216 (SFC216Q) /CSM/SF/SFC2-A/SFC216Q.Seq.d/                       1709   0.0
AFE356 (AFE356Q) /CSM/AF/AFE3-C/AFE356Q.Seq.d/                       1090   0.0
SHJ555 (SHJ555Q) /CSM/SH/SHJ5-C/SHJ555Q.Seq.d/                       1084   0.0
SFI863 (SFI863Q) /CSM/SF/SFI8-C/SFI863Q.Seq.d/                       1065   0.0
CFH121 (CFH121Q) /CSM/CF/CFH1-A/CFH121Q.Seq.d/                        991   0.0
AFM573 (AFM573Q) /CSM/AF/AFM5-D/AFM573Q.Seq.d/                        991   0.0
SFI481 (SFI481Q) /CSM/SF/SFI4-D/SFI481Q.Seq.d/                        989   0.0
AFN519 (AFN519Q) /CSM/AF/AFN5-A/AFN519Q.Seq.d/                        985   0.0
AFJ730 (AFJ730Q) /CSM/AF/AFJ7-B/AFJ730Q.Seq.d/                        969   0.0
AFI803 (AFI803Q) /CSM/AF/AFI8-A/AFI803Q.Seq.d/                        918   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC116988|AC116988.2 Dictyostelium discoideum chromosome 2 map 6445720-6776760 strain AX4, complete sequence.    62   2e-13  23
AF250284|AF250284.1 Amsacta moorei entomopoxvirus, complete genome.    38   1e-12  19
AC115577|AC115577.2 Dictyostelium discoideum chromosome 2 map 4657875-4914984 strain AX4, complete sequence.    66   2e-12  16
AC117081|AC117081.1 Dictyostelium discoideum chromosome 2 map 4903137-4960091 strain AX4, *** SEQUENCING IN PROGRESS ***, in ordered pieces.    68   3e-11  8
AC117076|AC117076.2 Dictyostelium discoideum chromosome 2 map 5862124-6045772 strain AX4, complete sequence.    68   9e-11  13
AB063522|AB063522.2 Wigglesworthia brevipalpis DNA, complete genome, section 2/2.    34   1e-08  22
AL445565|AL445565.1 Mycoplasma pulmonis (strain UAB CTIP) complete genome; segment 3/3.    38   8e-08  24
AL844509|AL844509.1 Plasmodium falciparum chromosome 13.           34   1e-07  27
AJ294725|AJ294725.1 Astasia longa complete chloroplast genome.     32   2e-07  15
AE014016|AE014016.1 Buchnera aphidicola (Baizongia pistaciae), section 1 of 2 of the complete genome.    36   3e-07  22

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54L81) RecName: Full=Probable serine/threonine-protein kinase ...   197   5e-68
AE014188_445(AE014188|pid:none) Plasmodium falciparum 3D7 chromo...   167   9e-52
AY596821_1(AY596821|pid:none) Plasmodium falciparum protein kina...   167   1e-51
AP008218_1393(AP008218|pid:none) Oryza sativa (japonica cultivar...   151   2e-51
BT067264_1(BT067264|pid:none) Zea mays full-length cDNA clone ZM...   149   1e-50
EU953572_1(EU953572|pid:none) Zea mays clone 1436272 unknown mRNA.    149   1e-50
AP008209_2418(AP008209|pid:none) Oryza sativa (japonica cultivar...   143   2e-49
AC133139_18(AC133139|pid:none) Medicago truncatula clone mth1-8d...   145   9e-49
AC122727_26(AC122727|pid:none) Medicago truncatula clone mth2-13...   145   9e-49
U82935_1(U82935|pid:none) Caenorhabditis elegans protein kinase ...   150   4e-48

 psg: 0.52  gvh: 0.13  alm: 0.37  top: 0.53  tms: 0.00  mit: 0.23  mip: 0.00
 nuc: 0.06  erl: 0.00  erm: 0.40  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 60.0 %: nuclear
	 32.0 %: cytoplasmic
	  4.0 %: cytoskeletal
	  4.0 %: mitochondrial

>> prediction for SFC216 is nuc

>SFC216F.Seq
AAAAACATTTTCATTTTCATCAAAATTCTAATCAGATAATAATTAAAAAATAAAAATGGA
AACAATAAATAATAGAAATCCACAAGAAATTAATACCAATGAAACTATGATCGAAAATCC
AAAAGATAAAGTTTCAAATAATAATTTTATTCCTAAATTAAATTTAAATAATAATAATTT
AAATAAAATTAATCAACCAGGTGATTCTGAGACATTAGATAATCGTAGTAATCCATCCTC
TCCAATTGAATCACCACTTTCAACTGCAAGAATTTCATCTTCACATAATATTTTGTTTAA
AACTAGAGGTTATTATTTTATTAAACCAATTAGCAAAGGTGGATATGGTCAAGTATTTTT
AGCCATTACCAAATCAAATAAATTCTTTGCCATCAAATCAATTAACAAACGTGATACAAT
TGGAAAACATATGGTTAAAGAATTGATGGTTGAAAGAAATATATTAGTTCAATACCAAAA
CCAGTCAATTGTAAAATTATTTGAATGTTTTCAAACAAAAAAAAAACTTTATATGGTTAT
GGAGTTTTTACATGG----------

>SFC216Z.Seq
----------CTAAAAATATTATTGCTCAAATTGTTAATGGTTTAGAATTTATTCATAGT
TGTGGTATCATTCATAGAGATTTAAAAGTTGAAAATTTAATTTTTGATAAAAACGGAATT
ATCAAAATTGTTGATTTTGGTTTTTCTGAAGTTGGTTTCACCGGTAATAGTATTAAAAAT
GGAAATAAAAAAAATAACAAATGTTTGGGAACACCTTACTACATGTCTCCAGAAGTAATT
AATAAACGTGGATATGGTAAAACTATTGACTGGTGGGCATTGGGTATCATCATTTTTGAA
TTGTTAAGTGGTGAAACCCCATTCGTTGGTGATAATCAAAATATGATTTTTGAAAAAATC
ACTAACTATACAAATGAAATAAATTTTCCATCTTATTTTTCTGAAGTTGCAATTGATTTA
ATTCAAAAATTATTACAAGTAGATCCATTAAAGAGATTAGGTGCAAATGGTGCTGATGAA
GTTAAAAGACATCCATTCTTTAATGGAGTAAATTGGAGTAAAATTTATTCTCCAGAATCT
TTGACATTCAAGCCAAAAATAGAAAATGAATATGATTCCAGTTATTTTTTTGAAAGAGAA
AATGTTAAAAAAACAGTTTCTGCTAAAAAAACAAACAACAAAAAACCAATTAAAAGATAC
CTTTTCAAAGGTTTCAATTTTAAAAAAAATTAACCAAATCAAACAAATCATTATTTAAAA
CCTCTATTTATTAAAAATCTGCAAGTG

>SFC216P.Seq
AAAAACATTTTCATTTTCATCAAAATTCTAATCAGATAATAATTAAAAAATAAAAATGGA
AACAATAAATAATAGAAATCCACAAGAAATTAATACCAATGAAACTATGATCGAAAATCC
AAAAGATAAAGTTTCAAATAATAATTTTATTCCTAAATTAAATTTAAATAATAATAATTT
AAATAAAATTAATCAACCAGGTGATTCTGAGACATTAGATAATCGTAGTAATCCATCCTC
TCCAATTGAATCACCACTTTCAACTGCAAGAATTTCATCTTCACATAATATTTTGTTTAA
AACTAGAGGTTATTATTTTATTAAACCAATTAGCAAAGGTGGATATGGTCAAGTATTTTT
AGCCATTACCAAATCAAATAAATTCTTTGCCATCAAATCAATTAACAAACGTGATACAAT
TGGAAAACATATGGTTAAAGAATTGATGGTTGAAAGAAATATATTAGTTCAATACCAAAA
CCAGTCAATTGTAAAATTATTTGAATGTTTTCAAACAAAAAAAAAACTTTATATGGTTAT
GGAGTTTTTACATGG----------CTAAAAATATTATTGCTCAAATTGTTAATGGTTTA
GAATTTATTCATAGTTGTGGTATCATTCATAGAGATTTAAAAGTTGAAAATTTAATTTTT
GATAAAAACGGAATTATCAAAATTGTTGATTTTGGTTTTTCTGAAGTTGGTTTCACCGGT
AATAGTATTAAAAATGGAAATAAAAAAAATAACAAATGTTTGGGAACACCTTACTACATG
TCTCCAGAAGTAATTAATAAACGTGGATATGGTAAAACTATTGACTGGTGGGCATTGGGT
ATCATCATTTTTGAATTGTTAAGTGGTGAAACCCCATTCGTTGGTGATAATCAAAATATG
ATTTTTGAAAAAATCACTAACTATACAAATGAAATAAATTTTCCATCTTATTTTTCTGAA
GTTGCAATTGATTTAATTCAAAAATTATTACAAGTAGATCCATTAAAGAGATTAGGTGCA
AATGGTGCTGATGAAGTTAAAAGACATCCATTCTTTAATGGAGTAAATTGGAGTAAAATT
TATTCTCCAGAATCTTTGACATTCAAGCCAAAAATAGAAAATGAATATGATTCCAGTTAT
TTTTTTGAAAGAGAAAATGTTAAAAAAACAGTTTCTGCTAAAAAAACAAACAACAAAAAA
CCAATTAAAAGATACCTTTTCAAAGGTTTCAATTTTAAAAAAAATTAACCAAATCAAACA
AATCATTATTTAAAACCTCTATTTATTAAAAATCTGCAAGTG