AFA807
Library AF
(Link to library)
Clone ID AFA807
Atlas ID -
NBRP ID -
dictyBase ID -
Link to Contig Contig-U16252-1
Original site URL
Representative seq. ID AFA807F
(Link to Original site)
Representative DNA sequence
>AFA807 (AFA807Q) /CSM/AF/AFA8-A/AFA807Q.Seq.d/
TTGAAGTTGACCTTTACACCGAAAAAGATGGTGTTGTTTCATCATTCAGAGCTGCAGTTC
CATCAGGTGCATCAACTGGTATTTATGAAGCTGTTGAATTAAGAGATGGTGATAAATCAA
GATACTTAGGTAAAGGTGTACTCAAAGCAATCAAAAACATTCTCGAAGTCATTCAACCAG
CCGTCATTGGTAAATCAGTTTCCGATCAAGCTGCTATCGATAAATTAATGATCGATCTCG
ATGGTACCCCAAATAAAGGTAAATTAGGTGCCAACGCTATCCTTGCAGTCAGTTTAGCTG
TTTGCAGAGCTGGTGCTGCTGATAGAAATTTACCACTTTACAAATATATCTCAGAAATTG
CAGGTACTAAAATGAGATTACCAGTTCCAGCATTCAATGTTATCAATGGTGGTTCACATG
CAGGTAATAAATTAGCTATGCAAGAATTTATGATTTTACCAGTTGGTGCTAAAGATTTCA
ATGAAGCCTATCGTATGGGTTCAGAAGTTTATCATAACTTAAAGAATGTCATCAGTGGTA
GXXXXXXXXXX
sequence update 2001. 6. 1
Translated Amino Acid sequence
EVDLYTEKDGVVSSFRAAVPSGASTGIYEAVELRDGDKSRYLGKGVLKAIKNILEVIQPA
VIGKSVSDQAAIDKLMIDLDGTPNKGKLGANAILAVSLAVCRAGAADRNLPLYKYISEIA
GTKMRLPVPAFNVINGGSHAGNKLAMQEFMILPVGAKDFNEAYRMGSEVYHNLKNVISG-
--


Translated Amino Acid sequence (All Frames)
Frame A:
lkltftpkkmvlfhhselqfhqvhqlvfmklln*emvinqdt*vkvyskqsktfsksfnq
pslvnqfpikllsin**sismvpqikvn*vptlslqsv*lfaelvllieiyhftnisqkl
qvlk*dyqfqhsmlsmvvhmqvin*lcknl*fyqlvlkismkpivwvqkfiit*rmssvv
---


Frame B:
*s*plhrkrwccfiiqscssircinwyl*sc*ikrw**ikilr*rctqsnqkhsrshsts
rhw*isfrsscyr*indrsrwypk*r*ircqrypcsqfsclqswcc**kfttlqiylrnc
ry*neitsssiqcyqwwftcr**isyariydftswc*rfq*slsygfrsls*lkechqw-
--


Frame C:
EVDLYTEKDGVVSSFRAAVPSGASTGIYEAVELRDGDKSRYLGKGVLKAIKNILEVIQPA
VIGKSVSDQAAIDKLMIDLDGTPNKGKLGANAILAVSLAVCRAGAADRNLPLYKYISEIA
GTKMRLPVPAFNVINGGSHAGNKLAMQEFMILPVGAKDFNEAYRMGSEVYHNLKNVISG-
--


Homology vs CSM-cDNA

Score E
Sequences producing significant alignments: (bits) Value

VFB851 (VFB851Q) /CSM/VF/VFB8-C/VFB851Q.Seq.d/ 1072 0.0
SSM734 (SSM734Q) /CSM/SS/SSM7-B/SSM734Q.Seq.d/ 1072 0.0
SLA770 (SLA770Q) /CSM/SL/SLA7-C/SLA770Q.Seq.d/ 1072 0.0
SFH339 (SFH339Q) /CSM/SF/SFH3-B/SFH339Q.Seq.d/ 1072 0.0
SFC211 (SFC211Q) /CSM/SF/SFC2-A/SFC211Q.Seq.d/ 1072 0.0
AFO869 (AFO869Q) /CSM/AF/AFO8-C/AFO869Q.Seq.d/ 1072 0.0
AFO860 (AFO860Q) /CSM/AF/AFO8-C/AFO860Q.Seq.d/ 1072 0.0
AFK185 (AFK185Q) /CSM/AF/AFK1-D/AFK185Q.Seq.d/ 1072 0.0
AFG235 (AFG235Q) /CSM/AF/AFG2-B/AFG235Q.Seq.d/ 1072 0.0
AFE445 (AFE445Q) /CSM/AF/AFE4-B/AFE445Q.Seq.d/ 1072 0.0

own update 2003. 5.10
Homology vs DNA

Score E
Sequences producing significant alignments: (bits) Value N

BI504877|BI504877.1 BB170011A20G10.5 Bee Brain Normalized/Subtracted Library, BB17 Apis mellifera cDNA clone BB170011A20G10 5', mRNA sequence. 125 1e-31 2
BI511389|BI511389.1 BB160005B10G04 Bee Brain Normalized Library, BB16 Apis mellifera cDNA clone BB160005B10G04 5', mRNA sequence. 125 6e-25 1
BM164058|BM164058.1 EST566581 PyBS Plasmodium yoelii yoelii cDNA clone PYCLP21 5' end, mRNA sequence. 82 5e-24 2
BM166362|BM166362.1 EST568885 PyBS Plasmodium yoelii yoelii cDNA clone PYCNG69 5' end, mRNA sequence. 82 7e-24 2
BM161473|BM161473.1 EST563996 PyBS Plasmodium yoelii yoelii cDNA clone PYCKF24 5' end, mRNA sequence. 74 2e-21 2
AX619982|AX619982.1 Sequence 2945 from Patent WO02094868. 50 2e-20 5
BD237140|BD237140.1 Staphylococcus aureus gene and polypeptide. 50 2e-20 5
AR282358|AR282358.1 Sequence 21 from patent US 6521441. 50 2e-20 5
AF065394|AF065394.1 Staphylococcus aureus enolase (eno) gene, complete cds. 50 2e-20 5
Y17298|Y17298.1 Cunninghamella elegans mRNA for enolase. 86 2e-20 4
dna update 2003. 7.23
Homology vs Protein

Score E
Sequences producing significant alignments: (bits) Value

(Q54RK5) RecName: Full=Enolase A; EC=4.2.1.11; AltName:... 350 2e-95
BC045082_1(BC045082|pid:none) Xenopus laevis enolase 3, beta mus... 243 2e-63
DQ497988_1(DQ497988|pid:none) Polypterus senegalus enolase B mRN... 243 2e-63
DQ497989_1(DQ497989|pid:none) Typhlonectes natans enolase B mRNA... 243 3e-63
BC096516_1(BC096516|pid:none) Xenopus tropicalis hypothetical pr... 242 4e-63
DQ497985_1(DQ497985|pid:none) Polypterus senegalus enolase A mRN... 241 9e-63
(Q9W7L0) RecName: Full=Alpha-enolase; EC=4.2.1.11; AltN... 241 9e-63
BC071359_1(BC071359|pid:none) Danio rerio enolase 1, (alpha), mR... 241 1e-62
BC017249_1(BC017249|pid:none) Homo sapiens enolase 3 (beta, musc... 240 1e-62
(Q3ZC09) RecName: Full=Beta-enolase; EC=4.2.1.11; AltNa... 240 2e-62
protein update 2009. 3.26
PSORT

psg: 0.75 gvh: 0.46 alm: 0.36 top: 0.53 tms: 0.00 mit: 0.11 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

48.0 %: cytoplasmic
32.0 %: nuclear
8.0 %: vesicles of secretory system
4.0 %: cytoskeletal
4.0 %: Golgi
4.0 %: mitochondrial

>> prediction for AFA807 is cyt

5' end seq. ID AFA807F
5' end seq.
>AFA807F.Seq
TTGAAGTTGACCTTTACACCGAAAAAGATGGTGTTGTTTCATCATTCAGAGCTGCAGTTC
CATCAGGTGCATCAACTGGTATTTATGAAGCTGTTGAATTAAGAGATGGTGATAAATCAA
GATACTTAGGTAAAGGTGTACTCAAAGCAATCAAAAACATTCTCGAAGTCATTCAACCAG
CCGTCATTGGTAAATCAGTTTCCGATCAAGCTGCTATCGATAAATTAATGATCGATCTCG
ATGGTACCCCAAATAAAGGTAAATTAGGTGCCAACGCTATCCTTGCAGTCAGTTTAGCTG
TTTGCAGAGCTGGTGCTGCTGATAGAAATTTACCACTTTACAAATATATCTCAGAAATTG
CAGGTACTAAAATGAGATTACCAGTTCCAGCATTCAATGTTATCAATGGTGGTTCACATG
CAGGTAATAAATTAGCTATGCAAGAATTTATGATTTTACCAGTTGGTGCTAAAGATTTCA
ATGAAGCCTATCGTATGGGTTCAGAAGTTTATCATAACTTAAAGAATGTCATCAGTGGTA
G----------
Length of 5' end seq. 541
3' end seq. ID -
3' end seq. -
Length of 3' end seq. -
Connected seq. ID -
Connected seq. -
Length of connected seq. -
Full length Seq ID -
Full length Seq. -
Length of full length seq. -