>SFB111 (SFB111Q) /CSM/SF/SFB1-A/SFB111Q.Seq.d/
XXXXXXXXXXANCCAAAGGTGAAAAAATTCCACTGTCAATTTCATNAGAACCATACATTG
ATTCATCATTTATTGATGATGGTGATTCATACAATACAATTAGCGTTCCACTTCAAAGAT
TCTATAGCAAATGAATTCTATGCTATTACTCTATACTGGTTATGATGNATTGCAAATAGT
G

---PKVKKFHCQFHXNHTLIHHLLMMVIHTIQLAFHFKDSIANEFYAITLYWL*xians

Frame A:
---xkgekiplsisxepyidssfiddgdsyntisvplqrfysk*ilcyysilvmmxck*


Frame B:
---PKVKKFHCQFHXNHTLIHHLLMMVIHTIQLAFHFKDSIANEFYAITLYWL*xians


Frame C:
---qr*knstvnfxrtih*fiiy**w*fiqyn*rstskil*qmnsmlllytgydxlqiv

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SFB111 (SFB111Q) /CSM/SF/SFB1-A/SFB111Q.Seq.d/                        323   5e-88
CFE847 (CFE847Q) /CSM/CF/CFE8-B/CFE847Q.Seq.d/                        283   4e-76
CHD444 (CHD444Q) /CSM/CH/CHD4-B/CHD444Q.Seq.d/                        268   3e-71
CHB768 (CHB768Q) /CSM/CH/CHB7-C/CHB768Q.Seq.d/                        268   3e-71
SFA729 (SFA729Q) /CSM/SF/SFA7-B/SFA729Q.Seq.d/                        266   1e-70
SFA511 (SFA511Q) /CSM/SF/SFA5-A/SFA511Q.Seq.d/                        266   1e-70
CHD677 (CHD677Q) /CSM/CH/CHD6-D/CHD677Q.Seq.d/                        266   1e-70
SFB148 (SFB148Q) /CSM/SF/SFB1-B/SFB148Q.Seq.d/                        264   4e-70
SSD171 (SSD171Q) /CSM/SS/SSD1-C/SSD171Q.Seq.d/                        262   2e-69
SLH223 (SLH223Q) /CSM/SL/SLH2-A/SLH223Q.Seq.d/                        262   2e-69

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC116940|AC116940.2 Pan troglodytes clone RP43-166L2, WORKING DRAFT SEQUENCE.    50   0.010  1
AC006529|AC006529.1 Homo sapiens clone SCb-20L24 from 7q31, complete sequence.    50   0.010  1
AC135836|AC135836.2 Papio anubis clone RP41-251K4, WORKING DRAFT SEQUENCE, 4 ordered pieces.    50   0.010  1
AC116436|AC116436.2 Pan troglodytes clone RP43-55P4, WORKING DRAFT SEQUENCE, 4 ordered pieces.    50   0.010  1
AC109709|AC109709.4 Rattus norvegicus clone CH230-228K2, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces.    46   0.15   1
AC118905|AC118905.7 Rattus norvegicus clone CH230-255D17, WORKING DRAFT SEQUENCE, 4 unordered pieces.    46   0.15   1
AC010730|AC010730.11 Homo sapiens clone RP11-357O18, complete sequence.    36   0.24   4
AC122039|AC122039.4 Mus musculus chromosome 6 clone RP24-432H3, complete sequence.    44   0.60   1
AC101970|AC101970.3 Mus musculus clone RP24-267G24, WORKING DRAFT SEQUENCE, 10 unordered pieces.    30   1.2    2
AC101957|AC101957.2 Mus musculus clone RP24-170B23, WORKING DRAFT SEQUENCE, 23 unordered pieces.    30   1.2    2

 ***** No hits found ******

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3101297
Number of Hits to DB: 257,982,015

 psg: 0.93  gvh: 0.46  alm: 0.35  top: 0.40  tms: 0.00  mit: 0.28  mip: 0.00
 nuc: 0.06  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: cytoplasmic
	 40.0 %: nuclear
	  8.0 %: vesicles of secretory system
	  8.0 %: endoplasmic reticulum
	  4.0 %: mitochondrial

>> prediction for SFB111 is cyt

>SFB111Z.Seq
----------ANCCAAAGGTGAAAAAATTCCACTGTCAATTTCATNAGAACCATACATTG
ATTCATCATTTATTGATGATGGTGATTCATACAATACAATTAGCGTTCCACTTCAAAGAT
TCTATAGCAAATGAATTCTATGCTATTACTCTATACTGGTTATGATGNATTGCAAATAGT
G