>SFB110 (SFB110Q) /CSM/SF/SFB1-A/SFB110Q.Seq.d/
TTAAAAAATCNGANGAATNTAANGCANTNGCAAATAANCNTTTTAGGGANCAAAAATNTG
ATTTANCAGCANANGTTTNTNCAAANGCANTTAAATNTCATCCANCAGCANTTTTNTNTT
CAAATAGATCATTTTCAAATTTTAANAAXXXXXXXXXXTTATCATCACTCTATTGGCTTA
TAAATTATTGTACCCAAATCATATGCATTTGACAAGGGGTAACCATGAGACAACCGATAT
GAATCGTTTCTATGGTTTCCAAGGCGAAGTGGTTGCAAAATACAGTGAGATGGTATTCGA
TCTATTCTCAGAGTTGTTCAATTGGTTCCCATTGGCATTCGTGTTGGATGAATCGTTTAT
GGTGGTACATGGTGGTTTGTTTGGTAAGGATGGTGTCACACTTGACGATATTAGAAAGAT
TAAACGTAATGCACCAGATCCAAAAGATAATGAATTGGTTCAATGCTTACTTTGGTCTGA
TCCTCAATCAAATCCTGGTATTGCTCCTTCTTCAAGAGGTGTAGGTGTTTACTTTGGACC
TGATGTCACCAGACGTTTCCTCAAGGAAAATAATCTATCAACTATCATTAGATCTCATGA
AGTTAAAGAAAAAGGTTATCAAATCGATGATGATGGTTCTCTCATCACTGTTTTCTCTGC
TCCAAATTATTGTGATCAATCTGGTAATCTTGGCTCATTTATAAATATAACTGAAGATAA
AATTAAAATTACAACTTTGAAGCTGTNAACATCCGAATATACCACCAA

LKNXXNXXXXQIXXLGXKNXIXQXXFXQXXLNXIXQXFXXQIDHFQILX---

---IITLLAYKLLYPNHMHLTRGNHETTDMNRFYGFQGEVVAKYSEMVFDLFSELFNWFP
LAFVLDESFMVVHGGLFGKDGVTLDDIRKIKRNAPDPKDNELVQCLLWSDPQSNPGIAPS
SRGVGVYFGPDVTRRFLKENNLSTIIRSHEVKEKGYQIDDDGSLITVFSAPNYCDQSGNL
GSFINITEDKIKITTLKLXTSEYTT

Frame A:
LKNXXNXXXXQIXXLGXKNXIXQXXFXQXXLNXIXQXFXXQIDHFQILX---

---lsslywlinyctqiici*qgvtmrqpi*ivsmvskakwlqntvrwysiysqscsigs
hwhscwmnrlwwymvvclvrmvshltilerlnvmhqiqkimnwfnayfglilnqilvlll
lqev*vftldlmspdvssrkiiyqlsldlmklkkkviksmmmvlsslfsllqiivinlvi
lahl*i*lkiklklql*scxhpnipp

Frame B:
*kixxx*xxxk*xf*gxkx*fxsxxxxkxx*xssxsxfxfk*iifkf*x---

---yhhsigl*iivpksyafdkg*p*dnryesflwfprrsgckiq*dgirsilrvvqlvp
igirvg*ivyggtwwfvw*gwcht*ry*kd*t*ctrskr**igsmltlv*ssikswycsf
fkrcrcllwt*chqtfpqgk*sinyh*is*s*rkrlsnr**wfshhcflcskll*siw*s
wliykyn*r*n*nynfeavniriyhq

Frame C:
kksxexxaxanxxfrxqkxdlxaxvxxxaxkxhpxaxxxsnrsfsnfx---

---IITLLAYKLLYPNHMHLTRGNHETTDMNRFYGFQGEVVAKYSEMVFDLFSELFNWFP
LAFVLDESFMVVHGGLFGKDGVTLDDIRKIKRNAPDPKDNELVQCLLWSDPQSNPGIAPS
SRGVGVYFGPDVTRRFLKENNLSTIIRSHEVKEKGYQIDDDGSLITVFSAPNYCDQSGNL
GSFINITEDKIKITTLKLXTSEYTT

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SFB110 (SFB110Q) /CSM/SF/SFB1-A/SFB110Q.Seq.d/                       1291   0.0
VFI734 (VFI734Q) /CSM/VF/VFI7-B/VFI734Q.Seq.d/                       1203   0.0
VFF491 (VFF491Q) /CSM/VF/VFF4-D/VFF491Q.Seq.d/                       1203   0.0
SFG624 (SFG624Q) /CSM/SF/SFG6-A/SFG624Q.Seq.d/                       1203   0.0
AFO461 (AFO461Q) /CSM/AF/AFO4-C/AFO461Q.Seq.d/                       1203   0.0
AFL662 (AFL662Q) /CSM/AF/AFL6-C/AFL662Q.Seq.d/                       1203   0.0
SFD165 (SFD165Q) /CSM/SF/SFD1-C/SFD165Q.Seq.d/                       1195   0.0
AFA889 (AFA889Q) /CSM/AF/AFA8-D/AFA889Q.Seq.d/                       1181   0.0
SSE754 (SSE754Q) /CSM/SS/SSE7-C/SSE754Q.Seq.d/                       1176   0.0
VFF543 (VFF543Q) /CSM/VF/VFF5-B/VFF543Q.Seq.d/                       1172   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

BF272976|BF272976.1 GA__Eb0016H03f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Eb0016H03f, mRNA sequence.    48   3e-06  2
CA933944|CA933944.1 MTU3TS.P14.F11 Aspen stem cDNA Library Populus tremuloides cDNA, mRNA sequence.    54   3e-06  2
CB821514|CB821514.1 EST 2365 Half-Ripe Apricot Fruit Lambda Zap II Library Prunus armeniaca cDNA clone be002m12 3', mRNA sequence.    60   5e-05  1
BU041737|BU041737.1 PP_LEa0010F03f Peach developing fruit mesocarp Prunus persica cDNA clone PP_LEa0010F03f, mRNA sequence.    60   5e-05  1
BQ916199|BQ916199.1 QHB17B15.yg.ab1 QH_ABCDI sunflower RHA801 Helianthus annuus cDNA clone QHB17B15, mRNA sequence.    58   2e-04  1
AJ561748|AJ561748.1 Cryptosporidium parvum GSS, PAC clone pica_0004_g07, T7 end  sequence.    34   0.003  3
BU822525|BU822525.1 UB38BPH04 Populus tremula cambium cDNA library Populus tremula cDNA 5 prime, mRNA sequence.    54   0.003  1
BU895987|BU895987.1 X033H08 Populus wood cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA sequence.    54   0.003  1
CK097096|CK097096.1 UB38BPH04.3pR Populus active cambium cDNA library Populus tremula cDNA clone UB38BPH04 3', mRNA sequence.    54   0.003  1
AV202542|AV202542.1 Caenorhabditis elegans cDNA clone:yk551g8 : 5' end, single read.    44   0.015  2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CP001323_193(CP001323|pid:none) Micromonas sp. RCC299 chromosome...   228   2e-58
CR848198_1(CR848198|pid:none) Xenopus tropicalis finished cDNA, ...   228   2e-58
BC080162_1(BC080162|pid:none) Xenopus tropicalis ppp5c protein, ...   228   2e-58
CR859667_1(CR859667|pid:none) Pongo abelii mRNA; cDNA DKFZp459E1...   227   3e-58
(P53041) RecName: Full=Serine/threonine-protein phosphatase 5;  ...   227   3e-58
AK297095_1(AK297095|pid:none) Homo sapiens cDNA FLJ55717 complet...   227   3e-58
AK223222_1(AK223222|pid:none) Homo sapiens mRNA for protein phos...   227   3e-58
BC000750_1(BC000750|pid:none) Homo sapiens protein phosphatase 5...   227   3e-58
AK293402_1(AK293402|pid:none) Homo sapiens cDNA FLJ55048 complet...   227   3e-58
BC078786_1(BC078786|pid:none) Rattus norvegicus protein phosphat...   225   1e-57

 psg: 0.78  gvh: 0.44  alm: 0.38  top: 0.53  tms: 0.00  mit: 0.27  mip: 0.12
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: cytoplasmic
	 32.0 %: nuclear
	 12.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: endoplasmic reticulum

>> prediction for SFB110 is cyt

>SFB110F.Seq
TTAAAAAATCNGANGAATNTAANGCANTNGCAAATAANCNTTTTAGGGANCAAAAATNTG
ATTTANCAGCANANGTTTNTNCAAANGCANTTAAATNTCATCCANCAGCANTTTTNTNTT
CAAATAGATCATTTTCAAATTTTAANAA----------

>SFB110Z.Seq
----------TTATCATCACTCTATTGGCTTATAAATTATTGTACCCAAATCATATGCAT
TTGACAAGGGGTAACCATGAGACAACCGATATGAATCGTTTCTATGGTTTCCAAGGCGAA
GTGGTTGCAAAATACAGTGAGATGGTATTCGATCTATTCTCAGAGTTGTTCAATTGGTTC
CCATTGGCATTCGTGTTGGATGAATCGTTTATGGTGGTACATGGTGGTTTGTTTGGTAAG
GATGGTGTCACACTTGACGATATTAGAAAGATTAAACGTAATGCACCAGATCCAAAAGAT
AATGAATTGGTTCAATGCTTACTTTGGTCTGATCCTCAATCAAATCCTGGTATTGCTCCT
TCTTCAAGAGGTGTAGGTGTTTACTTTGGACCTGATGTCACCAGACGTTTCCTCAAGGAA
AATAATCTATCAACTATCATTAGATCTCATGAAGTTAAAGAAAAAGGTTATCAAATCGAT
GATGATGGTTCTCTCATCACTGTTTTCTCTGCTCCAAATTATTGTGATCAATCTGGTAAT
CTTGGCTCATTTATAAATATAACTGAAGATAAAATTAAAATTACAACTTTGAAGCTGTNA
ACATCCGAATATACCACCAA

>SFB110P.Seq
TTAAAAAATCNGANGAATNTAANGCANTNGCAAATAANCNTTTTAGGGANCAAAAATNTG
ATTTANCAGCANANGTTTNTNCAAANGCANTTAAATNTCATCCANCAGCANTTTTNTNTT
CAAATAGATCATTTTCAAATTTTAANAA----------TTATCATCACTCTATTGGCTTA
TAAATTATTGTACCCAAATCATATGCATTTGACAAGGGGTAACCATGAGACAACCGATAT
GAATCGTTTCTATGGTTTCCAAGGCGAAGTGGTTGCAAAATACAGTGAGATGGTATTCGA
TCTATTCTCAGAGTTGTTCAATTGGTTCCCATTGGCATTCGTGTTGGATGAATCGTTTAT
GGTGGTACATGGTGGTTTGTTTGGTAAGGATGGTGTCACACTTGACGATATTAGAAAGAT
TAAACGTAATGCACCAGATCCAAAAGATAATGAATTGGTTCAATGCTTACTTTGGTCTGA
TCCTCAATCAAATCCTGGTATTGCTCCTTCTTCAAGAGGTGTAGGTGTTTACTTTGGACC
TGATGTCACCAGACGTTTCCTCAAGGAAAATAATCTATCAACTATCATTAGATCTCATGA
AGTTAAAGAAAAAGGTTATCAAATCGATGATGATGGTTCTCTCATCACTGTTTTCTCTGC
TCCAAATTATTGTGATCAATCTGGTAATCTTGGCTCATTTATAAATATAACTGAAGATAA
AATTAAAATTACAACTTTGAAGCTGTNAACATCCGAATATACCACCAA