>SFA635 (SFA635Q) /CSM/SF/SFA6-B/SFA635Q.Seq.d/
AACAAATTCAATTCAATAATTTAACAAATCAAAATATCTTCAAATATTTTTAAATATAAG
ATTACATTTATAACATTACATTTTATAACATTATATAAATAATCTAAAAAAAAAAXXXXX
XXXXX

nkfnsii*QIKISSNIFKYKITFITLHFITLYK*skkk---

Frame A:
nkfnsii*QIKISSNIFKYKITFITLHFITLYK*skkk---


Frame B:
tnsiq*fnkskylqiflnirlhl*hyil*hyinnlkk---


Frame C:
qiqfnnltnqnifkyf*i*dyiynitfynii*ii*kk---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SFA635 (SFA635Q) /CSM/SF/SFA6-B/SFA635Q.Seq.d/                        208   1e-53
CHA447 (CHA447Q) /CSM/CH/CHA4-B/CHA447Q.Seq.d/                        194   2e-49
SLE866 (SLE866Q) /CSM/SL/SLE8-C/SLE866Q.Seq.d/                        182   8e-46
VFK292 (VFK292Q) /CSM/VF/VFK2-D/VFK292Q.Seq.d/                         36   0.11
SSE210 (SSE210Q) /CSM/SS/SSE2-A/SSE210Q.Seq.d/                         36   0.11
VFJ122 (VFJ122Q) /CSM/VF/VFJ1-A/VFJ122Q.Seq.d/                         34   0.43
VFH396 (VFH396Q) /CSM/VF/VFH3-D/VFH396Q.Seq.d/                         34   0.43
VFG840 (VFG840Q) /CSM/VF/VFG8-B/VFG840Q.Seq.d/                         34   0.43
VFA553 (VFA553Q) /CSM/VF/VFA5-C/VFA553Q.Seq.d/                         34   0.43
SSM295 (SSM295Q) /CSM/SS/SSM2-D/SSM295Q.Seq.d/                         34   0.43

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 map 1005175-1418323 strain AX4, complete sequence.   208   1e-50  14
AL844509|AL844509.1 Plasmodium falciparum chromosome 13.           34   2e-08  15
AE014836|AE014836.1 Plasmodium falciparum 3D7 chromosome 11 section 1 of 8 of the complete sequence.    36   5e-08  12
AE014818|AE014818.1 Plasmodium falciparum 3D7 chromosome 14 section 3 of 13 of the complete sequence.    36   1e-07  11
AE014844|AE014844.1 Plasmodium falciparum 3D7 chromosome 12, section 1 of 9 of the complete sequence.    34   5e-06  10
AL031745|AL031745.8 Plasmodium falciparum DNA from MAL1P2.         34   1e-05  13
AL034557|AL034557.8 Plasmodium falciparum MAL4P1.                  34   2e-05  10
AB063521|AB063521.2 Wigglesworthia brevipalpis DNA, complete genome, section 1/2.    38   3e-05  13
AY149028|AY149028.1 Plasmodium chabaudi chabaudi strain AS clone YAC101, complete sequence.    34   4e-05  9
AE014830|AE014830.1 Plasmodium falciparum 3D7 chromosome 10 section 2 of 7 of the complete sequence.    34   4e-05  10

 ***** No hits found ******

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3101297
Number of Hits to DB: 103,323,185

 psg: 0.81  gvh: 0.15  alm: 0.43  top: 0.53  tms: 0.00  mit: 0.42  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 36.0 %: nuclear
	 28.0 %: cytoplasmic
	 20.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: Golgi
	  4.0 %: plasma membrane
	  4.0 %: peroxisomal

>> prediction for SFA635 is nuc

>SFA635F.Seq
AACAAATTCAATTCAATAATTTAACAAATCAAAATATCTTCAAATATTTTTAAATATAAG
ATTACATTTATAACATTACATTTTATAACATTATATAAATAATCTAAAAAAAAAA-----
-----