>SFA442 (SFA442Q) /CSM/SF/SFA4-B/SFA442Q.Seq.d/
XXXXXXXXXXATTTAAAACCAATTCCACCAGCAGAAAGAGGTGATATCATTTCAGCCTAC
CATCGTAGATTAACAGGTACTGATGAAAAGATTAAACAAGAGGCAGCCAATGCATGGACA
ACATGGGAAATGGCAACATCAAGATTAATGGTTGATAAACATAAGATTGCACGTGGTGAA
GATCCAATGTTTGCTTTAGCATTTGCCAGAATTGAAAATCATTACTTTGTAAATGCCGGT
TTCTTTAGAGAGGATGGTCAATTGATTAACGATGCTCATATTCTTAAAAATATTCCAGGT
GTTATCGTTCAAGGTAGATATGATGTAGTTTGCCCAATGAAATCCGCTTGGGATCTTAAA
AAAGTTTGGGGTGAAAATGCCGATTTGGTTATCATTCCAGATTCCGGTCATTCTTGTTCC
GAAAATGGTATCATTCATTCTTTAGTTGAAGCATGNGATAAATTTAAACATCT

---LKPIPPAERGDIISAYHRRLTGTDEKIKQEAANAWTTWEMATSRLMVDKHKIARGED
PMFALAFARIENHYFVNAGFFREDGQLINDAHILKNIPGVIVQGRYDVVCPMKSAWDLKK
VWGENADLVIIPDSGHSCSENGIIHSLVEAXDKFKH

Frame A:
---fktnstsrkr*yhfslps*inry**kd*trgsqcmdnmgngniking**t*dctw*r
snvcfsicqn*ksllckcrfl*rgwsid*rcsys*kysrcyrsr*i*cslpneirlgs*k
slg*kcrfgyhsrfrsflfrkwyhsffs*smx*i*ts


Frame B:
---LKPIPPAERGDIISAYHRRLTGTDEKIKQEAANAWTTWEMATSRLMVDKHKIARGED
PMFALAFARIENHYFVNAGFFREDGQLINDAHILKNIPGVIVQGRYDVVCPMKSAWDLKK
VWGENADLVIIPDSGHSCSENGIIHSLVEAXDKFKH


Frame C:
---*nqfhqqkevisfqptivd*qvlmkrlnkrqpmhgqhgkwqhqd*wlinirlhvvki
qcll*hlpelkiitl*mpvslermvn*ltmliflkifqvlsfkvdmm*faq*nplgilkk
fgvkmpiwlsfqipvilvpkmvsfil*lkhxinlni

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VSC443 (VSC443Q) /CSM/VS/VSC4-B/VSC443Q.Seq.d/                        912   0.0
VFH527 (VFH527Q) /CSM/VF/VFH5-B/VFH527Q.Seq.d/                        912   0.0
SFA442 (SFA442Q) /CSM/SF/SFA4-B/SFA442Q.Seq.d/                        912   0.0
VSH516 (VSH516Q) /CSM/VS/VSH5-A/VSH516Q.Seq.d/                        906   0.0
VFK854 (VFK854Q) /CSM/VF/VFK8-C/VFK854Q.Seq.d/                        904   0.0
VHB412 (VHB412Q) /CSM/VH/VHB4-A/VHB412Q.Seq.d/                        902   0.0
VFN865 (VFN865Q) /CSM/VF/VFN8-C/VFN865Q.Seq.d/                        890   0.0
VFE705 (VFE705Q) /CSM/VF/VFE7-A/VFE705Q.Seq.d/                        890   0.0
VFH663 (VFH663Q) /CSM/VF/VFH6-C/VFH663Q.Seq.d/                        880   0.0
VFJ844 (VFJ844Q) /CSM/VF/VFJ8-B/VFJ844Q.Seq.d/                        866   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

CF518672|CF518672.1 CAP0007_IIIR_A11 Vitis vinifera cv. cabernet sauvignon (Clone 8) Petiole - CAP Vitis vinifera cDNA clone CAP0007_IIIR_A11 3', mRNA sequence.    48   0.11   1
CF518592|CF518592.1 CAP0007_IIIF_A11 Vitis vinifera cv. cabernet sauvignon (Clone 8) Petiole - CAP Vitis vinifera cDNA clone CAP0007_IIIF_A11 5', mRNA sequence.    48   0.11   1
CD013214|CD013214.1 VVC063G12_396037 An expressed sequence tag database for abiotic stressed berries of Vitis vinifera var. Chardonnay Vitis vinifera cDNA clone VVC063G12 3, mRNA sequence.    48   0.11   1
CB009093|CB009093.1 VVC063G12_230588 An expressed sequence tag database for abiotic stressed berries of Vitis vinifera var. Chardonnay Vitis vinifera cDNA clone VVC063G12 5, mRNA sequence.    48   0.11   1
BB285722|BB285722.1 Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library, clone:B020007H09, 3' end partial sequence.    46   0.43   1
AC006913|AC006913.1 Caenorhabditis elegans clone Y95B8, WORKING DRAFT SEQUENCE, 3 unordered pieces.    36   0.93   3
AZ483042|AZ483042.1 1M0308N20F Mouse 10kb plasmid UUGC1M library Mus musculus genomic clone UUGC1M0308N20 F, DNA sequence.    30   1.2    3
AC116947|AC116947.2 Tetraodon nigroviridis clone GSTNB-2P20, WORKING DRAFT SEQUENCE, 2 ordered pieces.    44   1.7    1
AL208047|AL208047.1 Tetraodon nigroviridis genome survey sequence PUC-Ori end of clone  155J18 of library G from Tetraodon nigroviridis.    44   1.7    1
AE011875|AE011875.1 Xanthomonas axonopodis pv. citri str. 306,  section 253 of 469 of the complete genome.    32   3.6    2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM743169_801(AM743169|pid:none) Stenotrophomonas maltophilia K27...   180   2e-44
CP001111_691(CP001111|pid:none) Stenotrophomonas maltophilia R55...   178   5e-44
CP000937_876(CP000937|pid:none) Francisella philomiragia subsp. ...   177   8e-44
AP008229_3441(AP008229|pid:none) Xanthomonas oryzae pv. oryzae M...   174   1e-42
AP009386_839(AP009386|pid:none) Burkholderia multivorans ATCC 17...   173   2e-42
(P52279) RecName: Full=Proline iminopeptidase;          Short=PI...   173   2e-42
AM920689_3552(AM920689|pid:none) Xanthomonas campestris pv. camp...   173   2e-42
AE008923_905(AE008923|pid:none) Xanthomonas axonopodis pv. citri...   173   2e-42
CP000379_1256(CP000379|pid:none) Burkholderia cenocepacia AU 105...   172   4e-42
AE008922_832(AE008922|pid:none) Xanthomonas campestris pv. campe...   171   6e-42

 psg: 0.55  gvh: 0.33  alm: 0.49  top: 0.53  tms: 0.00  mit: 0.20  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.40  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 56.0 %: cytoplasmic
	 36.0 %: nuclear
	  8.0 %: mitochondrial

>> prediction for SFA442 is cyt

>SFA442Z.Seq
----------ATTTAAAACCAATTCCACCAGCAGAAAGAGGTGATATCATTTCAGCCTAC
CATCGTAGATTAACAGGTACTGATGAAAAGATTAAACAAGAGGCAGCCAATGCATGGACA
ACATGGGAAATGGCAACATCAAGATTAATGGTTGATAAACATAAGATTGCACGTGGTGAA
GATCCAATGTTTGCTTTAGCATTTGCCAGAATTGAAAATCATTACTTTGTAAATGCCGGT
TTCTTTAGAGAGGATGGTCAATTGATTAACGATGCTCATATTCTTAAAAATATTCCAGGT
GTTATCGTTCAAGGTAGATATGATGTAGTTTGCCCAATGAAATCCGCTTGGGATCTTAAA
AAAGTTTGGGGTGAAAATGCCGATTTGGTTATCATTCCAGATTCCGGTCATTCTTGTTCC
GAAAATGGTATCATTCATTCTTTAGTTGAAGCATGNGATAAATTTAAACATCT