>FC-BL11 (FC-BL11Q) /CSM/FC/FC-BL/FC-BL11Q.Seq.d/
XXXXXXXXXXTCATGCTCATTTGGTGGTATTTATGGAATTGGATTCCTTGGTTTAATAAA
TCAATGTGTCAATGATCCATATAATCCAGATTATAATTATTACATTTTCTTACAAGAGCA
AGGTTCAGATAATGAACAAATTGTGTATCAATTACATAATAAAACCGATACCGATTGTAC
TGGTGAACCACCATTTTCAAATTATCATTTCATAAATAGAGAGGGAACATGTGATGCCGC
CCCTAACTTTATCGGTTTAGAGGATCAAATTGTAGATTTATACAACGAAAATAATGGTCA
AAGATATCTCTATGATGAACCTGCCTTTATAACTGTTTCCGATATGCCATATTCTGCTCA
TAACTCTGTATTCTTTGCTCTTTATAATCAAAGTTTTTGTAGTTCTGAAGCTCAATATCC
ACACTATGCAAAAGTTTTTTCAATTGGTTTACAAATGTTAACTCAAGAAGGTGTCACCTA
TTTCTATTCATGTGATCCACATACTTATCTTCCACAAATTACACTCTGTAAAAGTAAGGA
TAATTGTGAAACTAAAGCTTTAGATAATAGTTGTTCACTTGTAGATGGTACAGAAGATGT
TTATCAACAAATCTTCTATTCCCCAAGTTTTCAATAAATAAATTAAATTTTTGAAATCAC
TATAAAAAAAAAAAAAAAAAA

---CSFGGIYGIGFLGLINQCVNDPYNPDYNYYIFLQEQGSDNEQIVYQLHNKTDTDCTG
EPPFSNYHFINREGTCDAAPNFIGLEDQIVDLYNENNGQRYLYDEPAFITVSDMPYSAHN
SVFFALYNQSFCSSEAQYPHYAKVFSIGLQMLTQEGVTYFYSCDPHTYLPQITLCKSKDN
CETKALDNSCSLVDGTEDVYQQIFYSPSFQ*in*ifeitikkkkk

Frame A:
---hahlvvfmeldslv**invsmihiiqiiiitfsykskvqimnklcinyiikpipivl
vnhhfqiiis*ierehvmppltlsv*rikl*iyttkimvkdismmnlpl*lfpichilli
tlysllfiikvfvvlklnihtmqkffqlvykc*lkkvspisihvihilifhklhsvkvri
ivklkl*iivvhl*mvqkmfinkssipqvfnk*ikflksl*kkkkk


Frame B:
---mliwwylwnwipwfnksmcq*si*srl*llhfltrarfr**tncvsit**nryrlyw
*ttifklsfhk*rgnm*crp*lyrfrgsncrfiqrk*wskisl**tclyncfryaifcs*
lcilcsl*skfl*f*ssistlcksffnwftnvnsrrchlflfm*stylsstnytl*k*g*
l*n*sfr**lftcrwyrrclstnllfpkfsinklnf*nhykkkkkk


Frame C:
---CSFGGIYGIGFLGLINQCVNDPYNPDYNYYIFLQEQGSDNEQIVYQLHNKTDTDCTG
EPPFSNYHFINREGTCDAAPNFIGLEDQIVDLYNENNGQRYLYDEPAFITVSDMPYSAHN
SVFFALYNQSFCSSEAQYPHYAKVFSIGLQMLTQEGVTYFYSCDPHTYLPQITLCKSKDN
CETKALDNSCSLVDGTEDVYQQIFYSPSFQ*in*ifeitikkkkk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

FC-BL11 (FC-BL11Q) /CSM/FC/FC-BL/FC-BL11Q.Seq.d/                     1294   0.0
VSB548 (VSB548Q) /CSM/VS/VSB5-B/VSB548Q.Seq.d/                       1271   0.0
VFK192 (VFK192Q) /CSM/VF/VFK1-D/VFK192Q.Seq.d/                       1221   0.0
FC-BJ17 (FC-BJ17Q) /CSM/FC/FC-BJ/FC-BJ17Q.Seq.d/                     1219   0.0
FC-488 (FC-488Q) /CSM/CG/CG-FC/FC-488Q.Seq.d/                        1219   0.0
FCL-AD15 (FCL-AD15Q) /CSM/FCL/FCL-AD/FCL-AD15Q.Seq.d/                  38   0.17
CHB222 (CHB222Q) /CSM/CH/CHB2-A/CHB222Q.Seq.d/                         38   0.17
AFA445 (AFA445Q) /CSM/AF/AFA4-B/AFA445Q.Seq.d/                         38   0.17
VHI572 (VHI572Q) /CSM/VH/VHI5-C/VHI572Q.Seq.d/                         36   0.67
SSG348 (SSG348Q) /CSM/SS/SSG3-B/SSG348Q.Seq.d/                         36   0.67

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

AZ173195|AZ173195.1 SP_0123_B2_A11_T7A Strongylocentrotus purpuratus, purple sea urchin , sperm genomic BAC library Strongylocentrotus purpuratus genomic clone Plate=123 Col=22 Row=B, DNA sequence.    48  0.14  1
AP003130|AP003130.2 Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome, section 2/10.    36  0.30  7
AC142261|AC142261.1 Mus musculus chromosome UNK clone RP24-469C3, WORKING DRAFT SEQUENCE, 25 unordered pieces.    40  0.92  6
Z78015|Z78015.1 Caenorhabditis elegans cosmid R02D5.              38  1.2  3
AC091205|AC091205.3 Drosophila melanogaster 3L BAC RP98-22N9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence.    36  1.3  4
AX348947|AX348947.1 Sequence 405 from Patent WO0202807.           44  1.5  2
AX345278|AX345278.1 Sequence 349 from Patent WO0200928.           44  1.5  2
AX251786|AX251786.1 Sequence 47 from Patent WO0168911.            44  1.5  2
AC092090|AC092090.2 Canis familiaris clone RP81-300L5, WORKING DRAFT SEQUENCE, 8 ordered pieces.    36  1.5  3
CC181333|CC181333.1 JSal1_1_C24_T7 Sal I (15-25 kb) BAC library Zea mays genomic, DNA sequence.    40  1.7  2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC116924_5(AC116924|pid:none) Dictyostelium discoideum chromosom...    47   4e-04
AC116979_41(AC116979|pid:none) Dictyostelium discoideum chromoso...    37   0.51
AM406671_1790(AM406671|pid:none) Lactococcus lactis subsp. cremo...    34   3.3
FB341590_1(FB341590|pid:none) Sequence 3 from Patent EP1854878.        34   4.4
CP000724_1526(CP000724|pid:none) Alkaliphilus metalliredigens QY...    27   5.7
CP001054_124(CP001054|pid:none) Burkholderia phytofirmans PsJN p...    33   7.4
AE009950_559(AE009950|pid:none) Pyrococcus furiosus DSM 3638, co...    33   9.7

 psg: 0.95  gvh: 0.58  alm: 0.39  top: 0.27  tms: 0.00  mit: 0.13  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 36.0 %: cytoplasmic
	 24.0 %: nuclear
	 16.0 %: extracellular, including cell wall
	  8.0 %: vacuolar
	  8.0 %: endoplasmic reticulum
	  4.0 %: mitochondrial
	  4.0 %: vesicles of secretory system

>> prediction for FC-BL11 is cyt

>FC-BL11Z.Seq
----------TCATGCTCATTTGGTGGTATTTATGGAATTGGATTCCTTGGTTTAATAAA
TCAATGTGTCAATGATCCATATAATCCAGATTATAATTATTACATTTTCTTACAAGAGCA
AGGTTCAGATAATGAACAAATTGTGTATCAATTACATAATAAAACCGATACCGATTGTAC
TGGTGAACCACCATTTTCAAATTATCATTTCATAAATAGAGAGGGAACATGTGATGCCGC
CCCTAACTTTATCGGTTTAGAGGATCAAATTGTAGATTTATACAACGAAAATAATGGTCA
AAGATATCTCTATGATGAACCTGCCTTTATAACTGTTTCCGATATGCCATATTCTGCTCA
TAACTCTGTATTCTTTGCTCTTTATAATCAAAGTTTTTGTAGTTCTGAAGCTCAATATCC
ACACTATGCAAAAGTTTTTTCAATTGGTTTACAAATGTTAACTCAAGAAGGTGTCACCTA
TTTCTATTCATGTGATCCACATACTTATCTTCCACAAATTACACTCTGTAAAAGTAAGGA
TAATTGTGAAACTAAAGCTTTAGATAATAGTTGTTCACTTGTAGATGGTACAGAAGATGT
TTATCAACAAATCTTCTATTCCCCAAGTTTTCAATAAATAAATTAAATTTTTGAAATCAC
TATAAAAAAAAAAAAAAAAAA