>FC-BG06 (FC-BG06Q) /CSM/FC/FC-BG/FC-BG06Q.Seq.d/
GTTTAATAAAAAAGAAAGAATACCAACATGAGACTTTTATTGTGTTTAATTTTCTTAGTT
TTTGTTTTCAATTTTGCATTATCAACAGTTCATTTCAAAGATACCTTTGATAACGATTGG
GAATCAAGATGGGTTGTTAGTGATTGGCATAAAGAAGATGGTAAATCAGGTAAATTAGTT
CATACTGCAGGTAAATGGTTTGGTGATGAAAATCAAAAAGGTATTCAAACTAGTGAAGAT
GCTCGTTTCTACGCTGTATCAGCTAAATTCCCAAGTTTCAGTAACAAAGGTAAAGATTTA
GTTCTCCAATACACTGTAAAGAATGAACAAAAAGTTGATTGTGGTGGTTCATACATCAAG
TTATTACCATCCAAATTAGATCAATCAGCATTCGATGGTGAATCTGAATATTCCATTATG
TTTGGTCCAGATGTTTGTGGTGCCTCAAAGAGAGTTCACGTCATTCTCAACTACAAAGGA
AAGAACCATTTAATCAAGAAAGAAATCAACAAAGTTGAAACCGATCAATTAACTCATCAA
TACACTTTGGTCATTTCACCAGATAACACCTACAAAGTACTCGTCGATAACAAAGAGATC
CAAGCAGGTAACXXXXXXXXXXTGCCAACCAAGAAGCCGAAAAGAAAATGTTTGACGACC
TCGAAGCCGCCAAAGCTGAAGAGAGAAAGAAAGCTGACGAAAAATTAGCTGCCGAAAAAG
CTGCTGAAAAAGAAGCCGAAGAAGCTGATGAAGAAGAAGAAGAAGTCGCTGAAGAAGATT
TAGTTAAAACTGATGACAAAAAAGAAGAAGTCAAAAAATCAACCAAAAAAGTTGATCATG
ACGAACTTTAAATGAAATAAATAAATAATAAAAAAAAAACAAAAAAAAAAAAAAAA

v**KRKNTNMRLLLCLIFLVFVFNFALSTVHFKDTFDNDWESRWVVSDWHKEDGKSGKLV
HTAGKWFGDENQKGIQTSEDARFYAVSAKFPSFSNKGKDLVLQYTVKNEQKVDCGGSYIK
LLPSKLDQSAFDGESEYSIMFGPDVCGASKRVHVILNYKGKNHLIKKEINKVETDQLTHQ
YTLVISPDNTYKVLVDNKEIQAGN---

---ANQEAEKKMFDDLEAAKAEERKKADEKLAAEKAAEKEAEEADEEEEEVAEEDLVKTD
DKKEEVKKSTKKVDHDEL*mk*innkkktkkkkk

Frame A:
v**KRKNTNMRLLLCLIFLVFVFNFALSTVHFKDTFDNDWESRWVVSDWHKEDGKSGKLV
HTAGKWFGDENQKGIQTSEDARFYAVSAKFPSFSNKGKDLVLQYTVKNEQKVDCGGSYIK
LLPSKLDQSAFDGESEYSIMFGPDVCGASKRVHVILNYKGKNHLIKKEINKVETDQLTHQ
YTLVISPDNTYKVLVDNKEIQAGN---

---cqprsrkenv*rprsrqs*rekes*rkiscrksc*krsrrs**rrrrsr*rrfs*n*
*qkrrsqkinqks*s*rtlneink**kknkkkkk

Frame B:
fnkkeript*dfycv*fs*flfsilhyqqfiskiplitignqdgllvigikkmvnqvn*f
ilqvnglvmkikkvfklvkmlvstlyqlnsqvsvtkvki*fsntl*rmnkklivvvhtss
yyhpn*inqhsmvnlniplclvqmfvvpqreftsfsttkerti*srkkstklkpin*lin
tlwsfhqitptkyssitkrskqv---

---ANQEAEKKMFDDLEAAKAEERKKADEKLAAEKAAEKEAEEADEEEEEVAEEDLVKTD
DKKEEVKKSTKKVDHDEL*mk*innkkktkkkkk

Frame C:
likkkeyqhetfivfnflsfcfqfciinssfqryl**rlgikmgc**la*rrw*ir*iss
ycr*mvw**kskrysn**rcsflrcis*ipkfq*qr*rfsspihcke*tks*lwwfihqv
itiqirsisirw*i*ifhyvwsrclwclkessrhsqlqrkepfnqernqqs*nrsinssi
hfghftr*hlqstrr*qrdpsr*---

---ptkkpkrkclttskppklkrerkltkn*lpkkllkkkpkklmkkkkkslkki*lklm
tkkkksknqpkklimtnfk*nk*iikkkqkkkk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

FC-BG06 (FC-BG06Q) /CSM/FC/FC-BG/FC-BG06Q.Seq.d/                     1124   0.0
VFD485 (VFD485Q) /CSM/VF/VFD4-D/VFD485Q.Seq.d/                       1065   0.0
VFD121 (VFD121Q) /CSM/VF/VFD1-A/VFD121Q.Seq.d/                       1065   0.0
VFA820 (VFA820Q) /CSM/VF/VFA8-A/VFA820Q.Seq.d/                       1065   0.0
SLE570 (SLE570Q) /CSM/SL/SLE5-C/SLE570Q.Seq.d/                       1065   0.0
SLE160 (SLE160Q) /CSM/SL/SLE1-C/SLE160Q.Seq.d/                       1065   0.0
AHA115 (AHA115Q) /CSM/AH/AHA1-A/AHA115Q.Seq.d/                       1065   0.0
AFN528 (AFN528Q) /CSM/AF/AFN5-B/AFN528Q.Seq.d/                       1065   0.0
AFM264 (AFM264Q) /CSM/AF/AFM2-C/AFM264Q.Seq.d/                       1065   0.0
AFK716 (AFK716Q) /CSM/AF/AFK7-A/AFK716Q.Seq.d/                       1065   0.0

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

U36937|U36937.1 Dictyostelium discoideum calreticulin mRNA, complete cds.  1057  0.0  3
BZ392863|BZ392863.1 EINBW38TF EI_10_12_KB Entamoeba invadens genomic clone EINBW38, DNA sequence.    52  3e-05  2
BI876472|BI876472.1 fl72h01.y1 Sugano Kawakami zebrafish DRA Danio rerio cDNA clone 3819504 5' similar to TR:Q9PUC1 Q9PUC1 CALRETICULIN. ;, mRNA sequence.    42  3e-04  2
CB086220|CB086220.1 hj81f04.g1 Hedyotis centranthoides flower - Stage 2 (NYBG) Hedyotis centranthoides cDNA clone hj81f04, mRNA sequence.    36  4e-04  3
BI468042|BI468042.1 EST00452 Atlantic salmon Lambda Zap Express liver cDNA library Salmo salar cDNA clone LRR7-f02 5' similar to Calreticulin, mRNA sequence.    56  8e-04  1
CB937139|CB937139.1 IpCGJx13_12_E07_23 IpCGJx13 Ictalurus punctatus cDNA clone IpCGJx13_12_E07 5', mRNA sequence.    56  8e-04  1
BQ261502|BQ261502.1 fz71d12.y1 Sugano SJD adult male Danio rerio cDNA clone 5914030 5' similar to TR:Q9PUC1 Q9PUC1 CALRETICULIN. ;, mRNA sequence.    40  0.001  2
BM957414|BM957414.1 fy77g03.y1 Sugano SJD adult male Danio rerio cDNA clone 5777093 5' similar to TR:Q9PUC1 Q9PUC1 CALRETICULIN. ;, mRNA sequence.    40  0.001  2
BM861438|BM861438.1 fy49g10.y1 Sugano SJD adult male Danio rerio cDNA clone 5603155 5' similar to TR:Q9PUC1 Q9PUC1 CALRETICULIN. ;, mRNA sequence.    40  0.001  2
CA470385|CA470385.1 AGENCOURT_10732206 NCI_CGAP_ZEmb2 Danio rerio cDNA clone IMAGE:6789934 5', mRNA sequence.    40  0.002  2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U36937_1(U36937|pid:none) Dictyostelium discoideum calreticulin ...   370   e-101
AC133339_28(AC133339|pid:none) Oryza sativa chromosome 3 BAC OSJ...   231   2e-59
U27698_1(U27698|pid:none) Arabidopsis thaliana calreticulin (AtC...   230   4e-59
(Q40401) RecName: Full=Calreticulin; Flags: Precursor;  &T16968(...   230   4e-59
EF085019_1(EF085019|pid:none) Picea sitchensis clone WS0297_I16 ...   229   7e-59
AY836753_1(AY836753|pid:none) Triticum aestivum calreticulin-lik...   229   1e-58
AB196794_1(AB196794|pid:none) Glycine max Gm crt-1 mRNA for calr...   228   2e-58
EU984501_1(EU984501|pid:none) Nicotiana tabacum calreticulin mRN...   228   2e-58
L27348_1(L27348|pid:none) Hordeum vulgare calreticulin (CRH1) mR...   228   3e-58
AY086745_1(AY086745|pid:none) Arabidopsis thaliana clone 27210 m...   227   3e-58

 psg: 1.01  gvh: 0.69  alm: 0.49  top: 0.10  tms: 0.00  mit: 0.40  mip: 0.03
 nuc: 0.06  erl: 1.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 36.0 %: extracellular, including cell wall
	 32.0 %: endoplasmic reticulum
	 12.0 %: cytoplasmic
	 12.0 %: vacuolar
	  4.0 %: Golgi
	  4.0 %: nuclear

>> prediction for FC-BG06 is exc

>FC-BG06F.Seq
GTTTAATAAAAAAGAAAGAATACCAACATGAGACTTTTATTGTGTTTAATTTTCTTAGTT
TTTGTTTTCAATTTTGCATTATCAACAGTTCATTTCAAAGATACCTTTGATAACGATTGG
GAATCAAGATGGGTTGTTAGTGATTGGCATAAAGAAGATGGTAAATCAGGTAAATTAGTT
CATACTGCAGGTAAATGGTTTGGTGATGAAAATCAAAAAGGTATTCAAACTAGTGAAGAT
GCTCGTTTCTACGCTGTATCAGCTAAATTCCCAAGTTTCAGTAACAAAGGTAAAGATTTA
GTTCTCCAATACACTGTAAAGAATGAACAAAAAGTTGATTGTGGTGGTTCATACATCAAG
TTATTACCATCCAAATTAGATCAATCAGCATTCGATGGTGAATCTGAATATTCCATTATG
TTTGGTCCAGATGTTTGTGGTGCCTCAAAGAGAGTTCACGTCATTCTCAACTACAAAGGA
AAGAACCATTTAATCAAGAAAGAAATCAACAAAGTTGAAACCGATCAATTAACTCATCAA
TACACTTTGGTCATTTCACCAGATAACACCTACAAAGTACTCGTCGATAACAAAGAGATC
CAAGCAGGTAAC----------

>FC-BG06Z.Seq
----------TGCCAACCAAGAAGCCGAAAAGAAAATGTTTGACGACCTCGAAGCCGCCA
AAGCTGAAGAGAGAAAGAAAGCTGACGAAAAATTAGCTGCCGAAAAAGCTGCTGAAAAAG
AAGCCGAAGAAGCTGATGAAGAAGAAGAAGAAGTCGCTGAAGAAGATTTAGTTAAAACTG
ATGACAAAAAAGAAGAAGTCAAAAAATCAACCAAAAAAGTTGATCATGACGAACTTTAAA
TGAAATAAATAAATAATAAAAAAAAAACAAAAAAAAAAAAAAAA

>FC-BG06P.Seq
GTTTAATAAAAAAGAAAGAATACCAACATGAGACTTTTATTGTGTTTAATTTTCTTAGTT
TTTGTTTTCAATTTTGCATTATCAACAGTTCATTTCAAAGATACCTTTGATAACGATTGG
GAATCAAGATGGGTTGTTAGTGATTGGCATAAAGAAGATGGTAAATCAGGTAAATTAGTT
CATACTGCAGGTAAATGGTTTGGTGATGAAAATCAAAAAGGTATTCAAACTAGTGAAGAT
GCTCGTTTCTACGCTGTATCAGCTAAATTCCCAAGTTTCAGTAACAAAGGTAAAGATTTA
GTTCTCCAATACACTGTAAAGAATGAACAAAAAGTTGATTGTGGTGGTTCATACATCAAG
TTATTACCATCCAAATTAGATCAATCAGCATTCGATGGTGAATCTGAATATTCCATTATG
TTTGGTCCAGATGTTTGTGGTGCCTCAAAGAGAGTTCACGTCATTCTCAACTACAAAGGA
AAGAACCATTTAATCAAGAAAGAAATCAACAAAGTTGAAACCGATCAATTAACTCATCAA
TACACTTTGGTCATTTCACCAGATAACACCTACAAAGTACTCGTCGATAACAAAGAGATC
CAAGCAGGTAAC----------TGCCAACCAAGAAGCCGAAAAGAAAATGTTTGACGACC
TCGAAGCCGCCAAAGCTGAAGAGAGAAAGAAAGCTGACGAAAAATTAGCTGCCGAAAAAG
CTGCTGAAAAAGAAGCCGAAGAAGCTGATGAAGAAGAAGAAGAAGTCGCTGAAGAAGATT
TAGTTAAAACTGATGACAAAAAAGAAGAAGTCAAAAAATCAACCAAAAAAGTTGATCATG
ACGAACTTTAAATGAAATAAATAAATAATAAAAAAAAAACAAAAAAAAAAAAAAAA