>FC-AS23 (FC-AS23Q) /CSM/FC/FC-AS/FC-AS23Q.Seq.d/
XXXXXXXXXXACTTGGTCAAATGGTTTAATTTCAGCCGCTAAAGGTGTAGGTGCTGCAAC
TCATCGTTTAGTTGAAGCTGCAATGAAATCTGCAACTGGTAAAGCTGAAGAAGAAGAACT
CATTGCAACTGCACGTTCTGTAGCCGCTGCAACTGCCTTATTAGTCTCTGCTTCTCGTGC
TAAATCTGGTGATGACTATCAATCTCAAGCTGCCCATTCACATCTTTCAACTGCAGCTAG
ACAAGTCGCTTCCGCTACATCTGATCTTGTAGCTGCTGCTAAAGCTGCAACAATCTTTGA
CGAACAACAACAAGAAGAAGAACAAGAACAATTCAATTTCACTGGTTCAAAAGTAAAAGA
ATTAGAACAACAAATGAAGATTCTAAAATTAGAAAAAGAATTAGAAACTGCAAGAAGACA
AATGTTAAATTCAAGAAAACAAAATTTTAATAAAAATTAAAAAATAAAATAAAATAAATT
TTTAAAAAAACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

---WSNGLISAAKGVGAATHRLVEAAMKSATGKAEEEELIATARSVAAATALLVSASRAK
SGDDYQSQAAHSHLSTAARQVASATSDLVAAAKAATIFDEQQQEEEQEQFNFTGSKVKEL
EQQMKILKLEKELETARRQMLNSRKQNFNKN*kik*nkflkklkkkkkkkkkkkk

Frame A:
---lgqmv*fqplkv*vlqliv*lklq*nlqlvklkkknslqlhvl*plqlpy*slllvl
nlvmtinlklpihifqlqldkslplhlil*lllklqqsltnnnkkknknnsislvqk*kn
*nnk*rf*n*kkn*klqedkc*iqenkilikikk*nkinf*kn*kkkkkkkkkkk


Frame B:
---lvkwfnfsr*rcrccnssfs*scneicnw*s*rrrthcnctfcsrcnclislcfsc*
iw**lsisscpftsfncs*tsrfryi*scscc*scnnl*rtttrrrtrtiqfhwfkskri
rttnedskirkrirnckktnvkfkktkf**klknkik*ifkktkkkkkkkkkkkk


Frame C:
---WSNGLISAAKGVGAATHRLVEAAMKSATGKAEEEELIATARSVAAATALLVSASRAK
SGDDYQSQAAHSHLSTAARQVASATSDLVAAAKAATIFDEQQQEEEQEQFNFTGSKVKEL
EQQMKILKLEKELETARRQMLNSRKQNFNKN*kik*nkflkklkkkkkkkkkkkk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VHM787 (VHM787Q) /CSM/VH/VHM7-D/VHM787Q.Seq.d/                        741   0.0
SHG574 (SHG574Q) /CSM/SH/SHG5-D/SHG574Q.Seq.d/                        741   0.0
SHB455 (SHB455Q) /CSM/SH/SHB4-C/SHB455Q.Seq.d/                        741   0.0
FC-AS23 (FC-AS23Q) /CSM/FC/FC-AS/FC-AS23Q.Seq.d/                      741   0.0
AHE813 (AHE813Q) /CSM/AH/AHE8-A/AHE813Q.Seq.d/                        741   0.0
AFC684 (AFC684Q) /CSM/AF/AFC6-D/AFC684Q.Seq.d/                        741   0.0
SHD452 (SHD452Q) /CSM/SH/SHD4-C/SHD452Q.Seq.d/                        733   0.0
AFE754 (AFE754Q) /CSM/AF/AFE7-C/AFE754Q.Seq.d/                        733   0.0
FC-AL14 (FC-AL14Q) /CSM/FC/FC-AL/FC-AL14Q.Seq.d/                      605   e-172
CHD826 (CHD826Q) /CSM/CH/CHD8-B/CHD826Q.Seq.d/                         52   9e-06

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

U14576|U14576.2 Dictyostelium discoideum filopodin (talA) gene, complete cds.   842  0.0  1
AC125448|AC125448.2 Mus musculus clone RP23-122D10, WORKING DRAFT SEQUENCE, 6 ordered pieces.    60  7e-05  3
AC112073|AC112073.4 Rattus norvegicus clone CH230-360I5, *** SEQUENCING IN PROGRESS ***, 2 unordered pieces.    58  1e-04  1
U40719|U40719.1 Rattus norvegicus S-adenosylmethionine decarboxylase (AMDP3) pseudogene.    52  2e-04  3
AC097122|AC097122.6 Rattus norvegicus clone CH230-58N18, WORKING DRAFT SEQUENCE, 1 ordered piece.    60  5e-04  2
AC126081|AC126081.2 Rattus norvegicus clone CH230-362H10, *** SEQUENCING IN PROGRESS ***, 20 unordered pieces.    58  8e-04  3
AC102009|AC102009.8 Mus musculus clone RP24-512D20, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces.    60  0.001  3
AC026428|AC026428.5 Homo sapiens chromosome 5 clone CTD-2203I6, complete sequence.    52  0.001  3
AL669956|AL669956.10 Mouse DNA sequence from clone RP23-222I1 on chromosome X.    60  0.001  3
AC101665|AC101665.3 Mus musculus clone RP23-55C11, WORKING DRAFT SEQUENCE, 11 unordered pieces.    54  0.002  2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(P54633) RecName: Full=Talin-A; AltName: Full=Filopodin;              204   1e-51
A57036(A57036)talin - slime mold (Dictyostelium discoideum)           204   1e-51
(Q54K81) RecName: Full=Talin-B;                                        72   8e-12
AB023655_1(AB023655|pid:none) Dictyostelium discoideum talB mRNA...    72   8e-12
BC121787_1(BC121787|pid:none) Mus musculus talin 1, mRNA (cDNA c...    62   7e-09
AB028950_1(AB028950|pid:none) Homo sapiens mRNA for KIAA1027 pro...    62   7e-09
AF078828_1(AF078828|pid:none) Homo sapiens talin mRNA, complete ...    62   7e-09
AL732506_33(AL732506|pid:none) Mouse DNA sequence from clone RP2...    62   7e-09
BC018557_1(BC018557|pid:none) Mus musculus talin 1, mRNA (cDNA c...    62   7e-09
BC042923_1(BC042923|pid:none) Homo sapiens talin 1, mRNA (cDNA c...    62   7e-09

 psg: 0.69  gvh: 0.70  alm: 0.35  top: 0.53  tms: 0.00  mit: 0.28  mip: 0.04
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 36.0 %: nuclear
	 28.0 %: cytoplasmic
	 24.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: vesicles of secretory system
	  4.0 %: peroxisomal

>> prediction for FC-AS23 is nuc

>FC-AS23Z.Seq
----------ACTTGGTCAAATGGTTTAATTTCAGCCGCTAAAGGTGTAGGTGCTGCAAC
TCATCGTTTAGTTGAAGCTGCAATGAAATCTGCAACTGGTAAAGCTGAAGAAGAAGAACT
CATTGCAACTGCACGTTCTGTAGCCGCTGCAACTGCCTTATTAGTCTCTGCTTCTCGTGC
TAAATCTGGTGATGACTATCAATCTCAAGCTGCCCATTCACATCTTTCAACTGCAGCTAG
ACAAGTCGCTTCCGCTACATCTGATCTTGTAGCTGCTGCTAAAGCTGCAACAATCTTTGA
CGAACAACAACAAGAAGAAGAACAAGAACAATTCAATTTCACTGGTTCAAAAGTAAAAGA
ATTAGAACAACAAATGAAGATTCTAAAATTAGAAAAAGAATTAGAAACTGCAAGAAGACA
AATGTTAAATTCAAGAAAACAAAATTTTAATAAAAATTAAAAAATAAAATAAAATAAATT
TTTAAAAAAACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA