>FC-AS03 (FC-AS03Q) /CSM/FC/FC-AS/FC-AS03Q.Seq.d/
XXXXXXXXXXACAAAAGATTACAATTACCAATGATAAAGGTCGTCTTTCAAAAGAAGAAA
TTGAAAAAATGGTTGCTGATGCAGAGAAATTCAAACAACAAGATGAACAACAAAAAGATC
GTGTTGAATCAAAGAATAAATTGGAAAATTATGCATTCACTGTTAAAAATTCAATTAAAG
ATGAAAAAGTTGCAGCCAAAATTTCAGATTCAGATAAATCAACTATTGAATCTGAAACTG
AAAGTGTACTCAAATGGTTAGAATCAAATCAAACCGCAGAAAAGGATGAATATGAAGATA
AGATGAAAGCCTTAGAAGCAGTTGTCAATCCAATCATGAGTAAACTCTATCAAGAAGGAG
GTATGCCACAAGGTGGTGGTATGCCAGGTGGTATGTCAAATGATTCACCAAAGAGTTCAA
ACAACAAAGTAGACGAATTAGATTGACGGAATTTTTCAGAGGAAAACATCTCTATCAAAT
AGATTTCTTAAAAAATAATAAGTTAGTAAAATCAATAAAGCTTCTCATATATAGTACACA
TTAAAAAAAA

---QKITITNDKGRLSKEEIEKMVADAEKFKQQDEQQKDRVESKNKLENYAFTVKNSIKD
EKVAAKISDSDKSTIESETESVLKWLESNQTAEKDEYEDKMKALEAVVNPIMSKLYQEGG
MPQGGGMPGGMSNDSPKSSNNKVDELD*rnfseenisik*is*kiis**nq*sfsyivhi
kk

Frame A:
---QKITITNDKGRLSKEEIEKMVADAEKFKQQDEQQKDRVESKNKLENYAFTVKNSIKD
EKVAAKISDSDKSTIESETESVLKWLESNQTAEKDEYEDKMKALEAVVNPIMSKLYQEGG
MPQGGGMPGGMSNDSPKSSNNKVDELD*rnfseenisik*is*kiis**nq*sfsyivhi
kk


Frame B:
---krlqlpmikvvfqkkklkkwllmqrnsnnkmnnkkivlnqrinwkimhsllkiqlkm
kklqpkfqiqinqllnlklkvysng*nqikpqkrmnmkir*kp*kqlsiqs*vnsikkev
chkvvvcqvvcqmihqrvqttk*tn*idgifqrktslsnrflkk**vskinkashi*ytl
kk


Frame C:
---kdynyq**rssfkrrn*kngc*creiqttr*ttkrsc*ike*igklcihc*kfn*r*
kscsqnfrfr*iny*i*n*kctqmvriksnrrkg*i*r*deslrsscqsnhe*tlsrrry
atrwwyarwyvk*ftkefkqqsrrirlteffrgkhlyqidflknnklvksiklliysth*
kk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VHP266 (VHP266Q) /CSM/VH/VHP2-C/VHP266Q.Seq.d/                       1055   0.0
VFL101 (VFL101Q) /CSM/VF/VFL1-A/VFL101Q.Seq.d/                       1055   0.0
SSJ888 (SSJ888Q) /CSM/SS/SSJ8-D/SSJ888Q.Seq.d/                       1055   0.0
SSE694 (SSE694Q) /CSM/SS/SSE6-D/SSE694Q.Seq.d/                       1055   0.0
SLI245 (SLI245Q) /CSM/SL/SLI2-B/SLI245Q.Seq.d/                       1055   0.0
SLH812 (SLH812Q) /CSM/SL/SLH8-A/SLH812Q.Seq.d/                       1055   0.0
SLC207 (SLC207Q) /CSM/SL/SLC2-A/SLC207Q.Seq.d/                       1055   0.0
SLC194 (SLC194Q) /CSM/SL/SLC1-D/SLC194Q.Seq.d/                       1055   0.0
SLC111 (SLC111Q) /CSM/SL/SLC1-A/SLC111Q.Seq.d/                       1055   0.0
SLB786 (SLB786Q) /CSM/SL/SLB7-D/SLB786Q.Seq.d/                       1055   0.0

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

X75263|X75263.1 D.discoideum (AX3) mRNA for heat shock cognate protein (hsc70).  1055  0.0  1
L22736|L22736.1 Dictyostelium discoideum heat shock protein (hspB) gene,.  1047  0.0  1
M84019|M84019.1 Hydra magnipapillata heat shock protein 70.1 (hsp70.1) gene, partial cds.    58  1e-11  2
AI218785|AI218785.1 SWOvAFCAP12C05SK Onchocerca volvulus adult female cDNA (SAW98MLW-OvAF) Onchocerca volvulus cDNA clone SWOvAFCAP12C05 5', mRNA sequence.    44  3e-10  3
AI239270|AI239270.1 SWOvAFCAP13G08SK Onchocerca volvulus adult female cDNA (SAW98MLW-OvAF) Onchocerca volvulus cDNA clone SWOvAFCAP13G08 5', mRNA sequence.    44  3e-10  3
AF221542|AF221542.1 Cryptosporidium muris isolate 589 heat shock protein 70 (HSP70) gene, partial cds.    56  2e-09  3
AF221541|AF221541.1 Cryptosporidium serpentis heat shock protein 70 (HSP70) gene, partial cds.    52  2e-09  3
BM162567|BM162567.1 EST565090 PyBS Plasmodium yoelii yoelii cDNA clone PYCKU24 5' end, mRNA sequence.    40  2e-09  4
BM159459|BM159459.1 EST561982 PyBS Plasmodium yoelii yoelii cDNA clone PYCJE40 5' end, mRNA sequence.    40  1e-08  4
AX536934|AX536934.1 Sequence 535 from Patent WO02064766.          64  1e-07  2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(P36415) RecName: Full=Heat shock cognate 70 kDa protein 1;     ...   221   9e-57
S37394(S37394) dnaK-type molecular chaperone hsc70 - slime mold ...   221   9e-57
(Q54BE0) RecName: Full=Heat shock cognate 70 kDa protein 3;           144   2e-33
AF033852_1(AF033852|pid:none) Spinacia oleracea cytosolic heat s...   140   2e-32
FB790108_1(FB790108|pid:none) Sequence 9381 from Patent WO200803...   138   8e-32
(P24629) RecName: Full=Heat shock cognate 70 kDa protein 1;  &FB...   138   1e-31
AY253326_1(AY253326|pid:none) Nicotiana tabacum heat shock prote...   136   3e-31
(P22953) RecName: Full=Heat shock cognate 70 kDa protein 1;     ...   135   5e-31
AC147536_23(AC147536|pid:none) Medicago truncatula clone mth2-9l...   135   5e-31
AY830127_1(AY830127|pid:none) Medicago sativa heat shock protein...   135   5e-31

 psg: 0.38  gvh: 0.08  alm: 0.55  top: 0.53  tms: 0.00  mit: 0.25  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: nuclear
	 36.0 %: cytoplasmic
	  4.0 %: mitochondrial
	  4.0 %: vacuolar
	  4.0 %: plasma membrane

>> prediction for FC-AS03 is nuc

>FC-AS03Z.Seq
----------ACAAAAGATTACAATTACCAATGATAAAGGTCGTCTTTCAAAAGAAGAAA
TTGAAAAAATGGTTGCTGATGCAGAGAAATTCAAACAACAAGATGAACAACAAAAAGATC
GTGTTGAATCAAAGAATAAATTGGAAAATTATGCATTCACTGTTAAAAATTCAATTAAAG
ATGAAAAAGTTGCAGCCAAAATTTCAGATTCAGATAAATCAACTATTGAATCTGAAACTG
AAAGTGTACTCAAATGGTTAGAATCAAATCAAACCGCAGAAAAGGATGAATATGAAGATA
AGATGAAAGCCTTAGAAGCAGTTGTCAATCCAATCATGAGTAAACTCTATCAAGAAGGAG
GTATGCCACAAGGTGGTGGTATGCCAGGTGGTATGTCAAATGATTCACCAAAGAGTTCAA
ACAACAAAGTAGACGAATTAGATTGACGGAATTTTTCAGAGGAAAACATCTCTATCAAAT
AGATTTCTTAAAAAATAATAAGTTAGTAAAATCAATAAAGCTTCTCATATATAGTACACA
TTAAAAAAAA