>FC-AS02 (FC-AS02Q) /CSM/FC/FC-AS/FC-AS02Q.Seq.d/
XXXXXXXXXXACGGTCAAGTTATCACCATTGGTAAACGAACGTTTCCGTTGTCCAGAAGC
CCTCTTCCAACCATCATTCTTAGGTATGGAATCTGCTGGTATCCACGAAACCACATACAA
CTCCATCATGAAATGTGATGTTGATATCCGTAAAGATTTATACGGTAATGTCGTCTTATC
AGGTGGTACAACTATGTTCCCAGGTATTGCTGAACGTATGAACAAAGAATTAACTGCTTT
AGCACCATCAACCATGAAAATTAAAATCATTGCTCCACCAGAACGTAAATACTCTGTCTG
GATTGGTGGATCTATTTTAGCTTCACTCTCAACTTTCCAACAAATGTGGATCTCAAAAGA
AGAATATGATGAATCTGGTCCATCAATTGTCCACAGAAAATGTTTCTAAATCATGATGAA
AGTGCTTCACTTTAAAATAATAATAATAATATAACAATAATAATATTTAAATGTATAATA
AAATTTAATTACTTTTTTTTTAATGGTTGTTGATCTTTATCCGACCTTAAAAAAAAAAAA
ATAAAAAAAAAAAAAAAAAAAAAAAAAATAA

---VKLSPLVNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSG
GTTMFPGIAERMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE
YDESGPSIVHRKCF*immkvlhfkiiiii*q**ylnv**nlitfflmvvdlyptlkkkk*
kkkkkkkk*

Frame A:
---rssyhhw*tnvsvvqkpssnhhs*vwnllvstkphttps*nvmlisvkiytvmssyq
vvqlcsqvllnv*tkn*ll*hhqp*klksllhqnvntlsglvdlf*lhsqlsnkcgsqkk
nmmnlvhqlstenvsks**kcftlk****ynnnni*mynki*llff*wllifirp*kkkn
kkkkkkkkn


Frame B:
---gqvitigkrtfplsrsplptiilrygicwyprnhiqlhhem*c*yp*rfir*crlir
wynyvpryc*tyeqrincfstinhen*nhcstrt*ilcldwwiyfsftlnfptnvdlkrr
i**iwsincpqkmflnhdesasl*nnnnnitiiifkciikfnyfffngc*slsdlkkkki
kkkkkkkki


Frame C:
---VKLSPLVNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSG
GTTMFPGIAERMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE
YDESGPSIVHRKCF*immkvlhfkiiiii*q**ylnv**nlitfflmvvdlyptlkkkk*
kkkkkkkk*

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

FC-AS02 (FC-AS02Q) /CSM/FC/FC-AS/FC-AS02Q.Seq.d/                      835   0.0
SSM288 (SSM288Q) /CSM/SS/SSM2-D/SSM288Q.Seq.d/                        809   0.0
SSK713 (SSK713Q) /CSM/SS/SSK7-A/SSK713Q.Seq.d/                        809   0.0
SLH881 (SLH881Q) /CSM/SL/SLH8-D/SLH881Q.Seq.d/                        809   0.0
SLH863 (SLH863Q) /CSM/SL/SLH8-C/SLH863Q.Seq.d/                        809   0.0
SLH825 (SLH825Q) /CSM/SL/SLH8-B/SLH825Q.Seq.d/                        809   0.0
SLH701 (SLH701Q) /CSM/SL/SLH7-A/SLH701Q.Seq.d/                        809   0.0
SLH433 (SLH433Q) /CSM/SL/SLH4-B/SLH433Q.Seq.d/                        809   0.0
SLG648 (SLG648Q) /CSM/SL/SLG6-B/SLG648Q.Seq.d/                        809   0.0
SLE176 (SLE176Q) /CSM/SL/SLE1-D/SLE176Q.Seq.d/                        809   0.0

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

M14146|M14146.1 D.discoideum actin 15 gene, complete cds.        777  0.0  3
AC115579|AC115579.2 Dictyostelium discoideum chromosome 2 map 4915084-5005461 strain AX4, complete sequence.   777  0.0  3
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 map 1685067-2090751 strain AX4, complete sequence.   652  0.0  4
AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 map 2234041-2567370 strain AX4, complete sequence.   644  0.0  4
X03281|X03281.1 Dictyostelium discoideum gene for actin A8.      642  e-180  1
AC115577|AC115577.2 Dictyostelium discoideum chromosome 2 map 4657875-4914984 strain AX4, complete sequence.   615  e-174  5
X03282|X03282.1 dictyostelium discoideum gene for actin A12.     579  e-165  2
AC116956|AC116956.2 Dictyostelium discoideum chromosome 2 map 1418423-1684967 strain AX4, complete sequence.   575  e-163  4
AX771242|AX771242.1 Sequence 5 from Patent WO03034275.           557  e-162  2
J01278|J01278.1 Slime mold (D.discoideum) actin mRNA, coding region 3' end.   533  e-156  2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54H30) RecName: Full=Major actin; AltName: Full=Actin-1; AltNa...   254   1e-66
ATDO(A93223;A92871;S67999;A03004)actin - slime mold (Dictyosteli...   254   1e-66
X03282_1(X03282|pid:none) dictyostelium discoideum gene for acti...   254   1e-66
B23412(B23412)actin 12 - slime mold (Dictyostelium discoideum)        254   1e-66
(P02576) RecName: Full=Actin, plasmodial isoform;  &ATFY(A29044;...   252   5e-66
AF508263_1(AF508263|pid:none) Pyrocystis lunula actin mRNA, comp...   251   7e-66
(Q553U6) RecName: Full=Putative actin-22;  &AC116305_3(AC116305|...   251   9e-66
(P02578) RecName: Full=Actin-1;  &ATAX(A92886;A03004) &V00002_1(...   248   6e-65
(P07829) RecName: Full=Actin-3; AltName: Full=Actin-3-sub 1;          248   6e-65
AY615868_1(AY615868|pid:none) Amastigomonas marina actin gene, p...   248   8e-65

 psg: 0.68  gvh: 0.37  alm: 0.46  top: 0.53  tms: 0.00  mit: 0.26  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: cytoplasmic
	 44.0 %: nuclear
	  8.0 %: cytoskeletal
	  4.0 %: mitochondrial

>> prediction for FC-AS02 is cyt

>FC-AS02Z.Seq
----------ACGGTCAAGTTATCACCATTGGTAAACGAACGTTTCCGTTGTCCAGAAGC
CCTCTTCCAACCATCATTCTTAGGTATGGAATCTGCTGGTATCCACGAAACCACATACAA
CTCCATCATGAAATGTGATGTTGATATCCGTAAAGATTTATACGGTAATGTCGTCTTATC
AGGTGGTACAACTATGTTCCCAGGTATTGCTGAACGTATGAACAAAGAATTAACTGCTTT
AGCACCATCAACCATGAAAATTAAAATCATTGCTCCACCAGAACGTAAATACTCTGTCTG
GATTGGTGGATCTATTTTAGCTTCACTCTCAACTTTCCAACAAATGTGGATCTCAAAAGA
AGAATATGATGAATCTGGTCCATCAATTGTCCACAGAAAATGTTTCTAAATCATGATGAA
AGTGCTTCACTTTAAAATAATAATAATAATATAACAATAATAATATTTAAATGTATAATA
AAATTTAATTACTTTTTTTTTAATGGTTGTTGATCTTTATCCGACCTTAAAAAAAAAAAA
ATAAAAAAAAAAAAAAAAAAAAAAAAAATAA