>FC-AR21 (FC-AR21Q) /CSM/FC/FC-AR/FC-AR21Q.Seq.d/
XXXXXXXXXXAAAACGTTTCAGTCAAAGAAATTAAAAGAGGTATGGTCGCTGGTGACTCC
AAAAACGATCCACCACAAGAAACTGAAAAATTCGTTGCTCAAGTTATCGTCCTAAACCAT
CCAGGTCAAATCCATGCTGGTTACTCACCAGTCTTAGATTGTCACACTGCTCACATTGCC
TGTAAATTCACTGAAATCGTCGATAAAGTTGATCGTCGTACTGGTGCCGTCGTTGCCAAA
GAAGGTACTGCCGCCGTCGTTTTAAAGAATGGTGATGCCGCTATGGTCGAATTAACCCCA
TCTCGTCCAATGTGTGTTGAATCCTTCACTGAATACCCACCATTAGGTCGTTTCGCCGTC
AGAGATATGAGACAAACCGTCGCCGTCGGTGTCATCAAATCAACCGTCAAGAAAGCCCCA
GGTAAAGCCGGTGATAAGAAAGGTGCTGCTGCCCCATCAAAAAAGTTTTAAATAAATAAT
ATTTCTTAATAAATAGCTTTTTATAATAATTTTAAAAAAAAAAAAAAAAAAAAAAAAA

---NVSVKEIKRGMVAGDSKNDPPQETEKFVAQVIVLNHPGQIHAGYSPVLDCHTAHIAC
KFTEIVDKVDRRTGAVVAKEGTAAVVLKNGDAAMVELTPSRPMCVESFTEYPPLGRFAVR
DMRQTVAVGVIKSTVKKAPGKAGDKKGAAAPSKKF*innis**iafynnfkkkkkkkk

Frame A:
---krfsqrn*krygrw*lqkrsttrn*kircssyrpkpsrsnpcwlltslrlshcshcl
*ih*nrr*s*ssywcrrcqrrycrrrfkew*crygrinpissnvc*ilh*iptirsfrrq
ryetnrrrrchqinrqespr*sr**ercccpikkvlnk*yflinsfl**f*kkkkkkk


Frame B:
---NVSVKEIKRGMVAGDSKNDPPQETEKFVAQVIVLNHPGQIHAGYSPVLDCHTAHIAC
KFTEIVDKVDRRTGAVVAKEGTAAVVLKNGDAAMVELTPSRPMCVESFTEYPPLGRFAVR
DMRQTVAVGVIKSTVKKAPGKAGDKKGAAAPSKKF*innis**iafynnfkkkkkkkk


Frame C:
---tfqskklkevwslvtpktihhkklknsllklss*tiqvksmlvthqs*ivtlltlpv
nslkssiklivvlvpslpkkvlppsf*rmvmplwsn*phlvqcvlnpslnthh*vvspse
i*dkpspsvssnqpsrkpqvkpvirkvllphqksfk*iiflnk*lfiiilkkkkkkkk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

FC-AR21 (FC-AR21Q) /CSM/FC/FC-AR/FC-AR21Q.Seq.d/                      886   0.0
VSE380 (VSE380Q) /CSM/VS/VSE3-D/VSE380Q.Seq.d/                        870   0.0
VSD740 (VSD740Q) /CSM/VS/VSD7-B/VSD740Q.Seq.d/                        870   0.0
VSD380 (VSD380Q) /CSM/VS/VSD3-D/VSD380Q.Seq.d/                        870   0.0
VSD312 (VSD312Q) /CSM/VS/VSD3-A/VSD312Q.Seq.d/                        870   0.0
VFO616 (VFO616Q) /CSM/VF/VFO6-A/VFO616Q.Seq.d/                        870   0.0
VFO348 (VFO348Q) /CSM/VF/VFO3-B/VFO348Q.Seq.d/                        870   0.0
VFN666 (VFN666Q) /CSM/VF/VFN6-C/VFN666Q.Seq.d/                        870   0.0
VFN474 (VFN474Q) /CSM/VF/VFN4-D/VFN474Q.Seq.d/                        870   0.0
VFN472 (VFN472Q) /CSM/VF/VFN4-C/VFN472Q.Seq.d/                        870   0.0

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

X55973|X55973.1 D. discoideum EF1-I gene for elongation factor 1 alpha.   872  0.0  1
X55972|X55972.1 D. discoideum EF1-II gene for elongation factor 1 alpha.   831  0.0  1
AF016242|AF016242.1 Dictyostelium discoideum protein synthesis elongation factor 1-alpha (tef2) gene, partial cds.   652  0.0  1
M29935|M29935.1 C.albicans elongation factor 1-alpha (TEF-2) gene, complete cds.   117  1e-50  3
M29934|M29934.1 C.albicans elongation factor 1-alpha (TEF-1) gene, complete cds.   117  1e-50  3
AL409155|AL409155.1 T7 end of clone AV0AA013A10 of library AV0AA from strain CBS 379 of Saccharomyces exiguus.   109  3e-49  4
AL408145|AL408145.1 T7 end of clone AV0AA006G11 of library AV0AA from strain CBS 379 of Saccharomyces exiguus.   109  9e-49  4
AX109714|AX109714.1 Sequence 447 from Patent WO0123604.          129  8e-45  3
AX109715|AX109715.1 Sequence 448 from Patent WO0123604.          129  8e-45  3
AX109679|AX109679.1 Sequence 412 from Patent WO0123604.          101  1e-42  4

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X55973_1(X55973|pid:none) D. discoideum EF1-I gene for elongatio...   265   4e-70
X55972_1(X55972|pid:none) D. discoideum EF1-II gene for elongati...   265   4e-70
(P18624) RecName: Full=Elongation factor 1-alpha;          Short...   265   4e-70
AJ581004_1(AJ581004|pid:none) Axinella verrucosa mRNA for elonga...   200   2e-50
AY542532_1(AY542532|pid:none) Cladonema radiatum translation elo...   199   5e-50
AY643820_1(AY643820|pid:none) Arcyria denudata elongation factor...   199   5e-50
(Q00251) RecName: Full=Elongation factor 1-alpha;          Short...   198   6e-50
(P40911) RecName: Full=Elongation factor 1-alpha;          Short...   197   1e-49
AB326305_1(AB326305|pid:none) Solea senegalensis SseEF1A4 mRNA f...   197   1e-49
Y09023_1(Y09023|pid:none) G.cydonium mRNA for elongation factor ...   197   1e-49

 psg: 0.67  gvh: 0.50  alm: 0.47  top: 0.53  tms: 0.00  mit: 0.22  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.40  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: cytoplasmic
	 28.0 %: nuclear
	 20.0 %: mitochondrial
	  4.0 %: vacuolar
	  4.0 %: peroxisomal
	  4.0 %: endoplasmic reticulum

>> prediction for FC-AR21 is cyt

>FC-AR21Z.Seq
----------AAAACGTTTCAGTCAAAGAAATTAAAAGAGGTATGGTCGCTGGTGACTCC
AAAAACGATCCACCACAAGAAACTGAAAAATTCGTTGCTCAAGTTATCGTCCTAAACCAT
CCAGGTCAAATCCATGCTGGTTACTCACCAGTCTTAGATTGTCACACTGCTCACATTGCC
TGTAAATTCACTGAAATCGTCGATAAAGTTGATCGTCGTACTGGTGCCGTCGTTGCCAAA
GAAGGTACTGCCGCCGTCGTTTTAAAGAATGGTGATGCCGCTATGGTCGAATTAACCCCA
TCTCGTCCAATGTGTGTTGAATCCTTCACTGAATACCCACCATTAGGTCGTTTCGCCGTC
AGAGATATGAGACAAACCGTCGCCGTCGGTGTCATCAAATCAACCGTCAAGAAAGCCCCA
GGTAAAGCCGGTGATAAGAAAGGTGCTGCTGCCCCATCAAAAAAGTTTTAAATAAATAAT
ATTTCTTAATAAATAGCTTTTTATAATAATTTTAAAAAAAAAAAAAAAAAAAAAAAAA