>FC-AR15 (FC-AR15Q) /CSM/FC/FC-AR/FC-AR15Q.Seq.d/
CTTCAATATTACAATAGAATCTTTAAGGGTAACGAATGATTTACCATCAGGTAATGGTGC
TTTATGTTTAATCCATTGCCAAATTTGAGATCTTGAAATTTCAGCGGTAGCAGCATCTTC
CATAAGATTATGAATTTGGCAATGGATTAAACATAAAGCACCATTACCTGATGGTAAATC
ATTCGTTACCCTTCAATATTACAATAGAATCTTTAAAGAGGAATCTGATAAATTGGAAAA
AGCTCATCCAAATTCTAAAACTTTAACTGATGCCATTCAAATCTTTAATAATTTAATTGT
CTCTCCAAATTTCATTGACTTTTTAACACCTTCTTGTTATAAATTTGTTGTCGATTCTGA
AAGAAAAACTTTTTCTCCAAAATTATAAAA

fnitieslrvtndlpsgngalclihcqi*dleisavaassirl*IWQWIKHKAPLPDGKS
FVTLQYYNRIFKEESDKLEKAHPNSKTLTDAIQIFNNLIVSPNFIDFLTPSCYKFVVDSE
RKTFSPKL*

Frame A:
lqyynrifkgne*ftir*wcfmfnplpnlrs*nfsgssifhkimnlamd*t*stit*w*i
irypsilq*nl*rgi**igkssskf*nfn*chsnl**fnclskfh*lfntfll*iccrf*
kknffskiik


Frame B:
fnitieslrvtndlpsgngalclihcqi*dleisavaassirl*IWQWIKHKAPLPDGKS
FVTLQYYNRIFKEESDKLEKAHPNSKTLTDAIQIFNNLIVSPNFIDFLTPSCYKFVVDSE
RKTFSPKL*


Frame C:
silq*nl*g*rmiyhqvmvlyv*siakfeilkfqr*qhlp*dyefgnglnikhhylmvnh
slpfnitieslkrnlinwkkliqilkl*lmpfkslii*lslqisltf*hllvinllsilk
eklflqnyk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

FC-AR15 (FC-AR15Q) /CSM/FC/FC-AR/FC-AR15Q.Seq.d/                      773   0.0
FC-292 (FC-292Q) /CSM/CG/CG-FC/FC-292Q.Seq.d/                         773   0.0
FC-AZ10 (FC-AZ10Q) /CSM/FC/FC-AZ/FC-AZ10Q.Seq.d/                      765   0.0
SLF442 (SLF442Q) /CSM/SL/SLF4-B/SLF442Q.Seq.d/                        504   e-142
SFF709 (SFF709Q) /CSM/SF/SFF7-A/SFF709Q.Seq.d/                        464   e-130
VFL317 (VFL317Q) /CSM/VF/VFL3-A/VFL317Q.Seq.d/                        460   e-129
CFF652 (CFF652Q) /CSM/CF/CFF6-C/CFF652Q.Seq.d/                        456   e-127
VFI785 (VFI785Q) /CSM/VF/VFI7-D/VFI785Q.Seq.d/                        446   e-124
SLK157 (SLK157Q) /CSM/SL/SLK1-C/SLK157Q.Seq.d/                        442   e-123
VFF367 (VFF367Q) /CSM/VF/VFF3-C/VFF367Q.Seq.d/                        436   e-121

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC115598|AC115598.2 Dictyostelium discoideum chromosome 2 map 581427-735498 strain AX4, complete sequence.   511   e-141  1
AF222907|AF222907.1 Candida albicans malate synthase (MLS1) gene, complete cds; and unknown gene.    62   6e-06  1
BX848431|BX848431.1 RZPD Xenopus laevis cDNA clone IMAGp998F158579 = IMAGE:3517838 5'  EST.    36   3e-04  3
D13416|D13416.1 Candida tropicalis CTPMS2 gene for malate synthase, complete cds.    54   0.001  1
AE017001|AE017001.1 Bacillus cereus ATCC 14579 section 4 of 18 of the complete genome.    52   0.006  1
AL162873|AL162873.1 Arabidopsis thaliana DNA chromosome 5, BAC clone F8F6 (ESSA  project).    38   0.054  2
AB005235|AB005235.1 Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MED24.    38   0.054  2
AF360126|AF360126.1 Arabidopsis thaliana putative malate synthesis protein (F8F6.70) mRNA, complete cds.    38   0.064  2
AY051027|AY051027.1 Arabidopsis thaliana putative malate synthesis protein (F8F6.70) mRNA, complete cds.    38   0.064  2
BE603747|BE603747.1 GS002 GS Lambda-Triplex, 10 day germinating spore library Glomus intraradices cDNA clone Malate synthase contig of 2 clones, SP6/T7, Sfi = 386 bp, 1,274 similar to Malate Synthase, mRNA sequence.    48   0.088  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q8T2K9) RecName: Full=Malate synthase;          EC=2.3.3.9;  &A...   180   2e-44
AP006840_589(AP006840|pid:none) Symbiobacterium thermophilum IAM...    60   3e-08
CP001154_646(CP001154|pid:none) Laribacter hongkongensis HLHK9, ...    57   2e-07
CP000088_817(CP000088|pid:none) Thermobifida fusca YX, complete ...    56   4e-07
CP000454_3407(CP000454|pid:none) Arthrobacter sp. FB24, complete...    56   4e-07
AE016825_3304(AE016825|pid:none) Chromobacterium violaceum ATCC ...    55   6e-07
CP000774_593(CP000774|pid:none) Parvibaculum lavamentivorans DS-...    55   1e-06
CP000473_3070(CP000473|pid:none) Solibacter usitatus Ellin6076, ...    55   1e-06
AM920689_262(AM920689|pid:none) Xanthomonas campestris pv. campe...    54   1e-06
CP000352_1387(CP000352|pid:none) Ralstonia metallidurans CH34, c...    54   1e-06

 psg: 0.63  gvh: 0.24  alm: 0.43  top: 0.53  tms: 0.00  mit: 0.24  mip: 0.05
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: cytoplasmic
	 40.0 %: nuclear
	  8.0 %: cytoskeletal
	  4.0 %: extracellular, including cell wall
	  4.0 %: vacuolar
	  4.0 %: mitochondrial

>> prediction for FC-AR15 is cyt

>FC-AR15E.Seq
CTTCAATATTACAATAGAATCTTTAAGGGTAACGAATGATTTACCATCAGGTAATGGTGC
TTTATGTTTAATCCATTGCCAAATTTGAGATCTTGAAATTTCAGCGGTAGCAGCATCTTC
CATAAGATTATGAATTTGGCAATGGATTAAACATAAAGCACCATTACCTGATGGTAAATC
ATTCGTTACCCTTCAATATTACAATAGAATCTTTAAAGAGGAATCTGATAAATTGGAAAA
AGCTCATCCAAATTCTAAAACTTTAACTGATGCCATTCAAATCTTTAATAATTTAATTGT
CTCTCCAAATTTCATTGACTTTTTAACACCTTCTTGTTATAAATTTGTTGTCGATTCTGA
AAGAAAAACTTTTTCTCCAAAATTATAAAA