>FC-AR13 (FC-AR13Q) /CSM/FC/FC-AR/FC-AR13Q.Seq.d/
XXXXXXXXXXTTCACGTGTTGGTTGTATCGCTTTAAATACTCCATGTGAAGTTGATATCT
ATGGTCATGTCAATAGTACCAATACAATGGGTTCAAAAATGTTAAATGGTTTAGGTGGTA
GTGGTGAATTCTTAAGAAATTCAAGAATCTCCATTGTTCACACCCCATCAACTCGTCCAA
CTAAAACTGATCCACATGGTATTAGTTGTATCGTTCCTTTCGCCTCTCATATCGATCATA
CAGAACACGACATTGATATCATTGTAACCGAGCAAGGTTTAGCTGATATTCGTGGTTTGG
CACCTTATGAACGTGCTAAAGTTATCATTCAAAATTGTGCTCATCCAATCTATAAACCAA
TACTCATGGAATACCTTGAAACTTCTCGTCAAATTTGTTTAAAAAATCATATGGGACATG
AACCACATCAATTAGACAAAGCATTTAAATTTTATACAAATTTATCTGAAAAAGGTACTA
TGAAAATTGACAAGTGGTAAATAATAAAAATAAAAAATAAAAAATAAAAAATAAATAAAT
AAATAAAATGATTTAAAAAA

---SRVGCIALNTPCEVDIYGHVNSTNTMGSKMLNGLGGSGEFLRNSRISIVHTPSTRPT
KTDPHGISCIVPFASHIDHTEHDIDIIVTEQGLADIRGLAPYERAKVIIQNCAHPIYKPI
LMEYLETSRQICLKNHMGHEPHQLDKAFKFYTNLSEKGTMKIDKW*iikiknkk*kink*
ik*fkk

Frame A:
---SRVGCIALNTPCEVDIYGHVNSTNTMGSKMLNGLGGSGEFLRNSRISIVHTPSTRPT
KTDPHGISCIVPFASHIDHTEHDIDIIVTEQGLADIRGLAPYERAKVIIQNCAHPIYKPI
LMEYLETSRQICLKNHMGHEPHQLDKAFKFYTNLSEKGTMKIDKW*iikiknkk*kink*
ik*fkk


Frame B:
---hvlvvsl*ilhvklismvmsivpiqwvqkc*mv*vvvvns*eiqesplftphqlvql
klihmvlvvsflsplisiiqnttlisl*pskv*lifvvwhlmnvlklsfkivliqsinqy
swntlkllvkfv*kiiwdmnhin*tkhlnfiqiylkkvl*kltsgk**k*kiknkk*ink
*ndlk


Frame C:
---tcwlyrfkysm*s*ylwscq*yqyngfknvkwfrw*w*ilkkfknlhcshpinssn*
n*stwy*lyrsfrlsyrsyrtrh*yhcnrarfs*yswfgtl*tc*syhsklcssnl*tnt
hgip*nfssnlfkksygt*ttsirqsi*ilykfi*kryyen*qvvnnknkk*kiknk*in
kmi*k

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SFI539 (SFI539Q) /CSM/SF/SFI5-B/SFI539Q.Seq.d/                        965   0.0
FC-AR13 (FC-AR13Q) /CSM/FC/FC-AR/FC-AR13Q.Seq.d/                      965   0.0
FC-AL01 (FC-AL01Q) /CSM/FC/FC-AL/FC-AL01Q.Seq.d/                      965   0.0
FC-201 (FC-201Q) /CSM/CG/CG-FC/FC-201Q.Seq.d/                         965   0.0
CFK488 (CFK488Q) /CSM/CF/CFK4-D/CFK488Q.Seq.d/                        965   0.0
CFK307 (CFK307Q) /CSM/CF/CFK3-A/CFK307Q.Seq.d/                        965   0.0
CFI694 (CFI694Q) /CSM/CF/CFI6-D/CFI694Q.Seq.d/                        965   0.0
CHB325 (CHB325Q) /CSM/CH/CHB3-B/CHB325Q.Seq.d/                        957   0.0
CFH208 (CFH208Q) /CSM/CF/CFH2-A/CFH208Q.Seq.d/                        934   0.0
CFF826 (CFF826Q) /CSM/CF/CFF8-B/CFF826Q.Seq.d/                        934   0.0

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

AL409684|AL409684.1 T7 end of clone XAV0AA001D05 of library XAV0AA from strain CBS 379  of Saccharomyces exiguus.    62  4e-12  3
AE017030|AE017030.1 Bacillus anthracis str. Ames section 7 of 18 of the complete genome.    48  0.13  3
AL357336|AL357336.11 Human DNA sequence from clone RP11-373N18 on chromosome 10.    38  1.4  4
AL662951|AL662951.3 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011E07.    44  1.8  1
AP005398|AP005398.1 Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0669G10, WORKING DRAFT SEQUENCE, 1 ordered pieces.    44  1.8  1
AC117507|AC117507.5 Homo sapiens 3 BAC RP11-137K3 (Roswell Park Cancer Institute Human BAC Library) complete sequence.    44  1.8  1
AP001188|AP001188.3 Homo sapiens genomic DNA, chromosome 18q12 clone:RP11-658P14, WORKING DRAFT SEQUENCE, 8 unordered pieces.    36  2.3  4
AC139728|AC139728.2 Carollia perspicillata clone 29G20, WORKING DRAFT SEQUENCE, 8 ordered pieces.    36  2.6  2
AC129066|AC129066.3 Didelphis virginiana clone LB3-8N21, complete sequence.    42  3.3  2
AC002465|AC002465.1 Human BAC clone CTA-343P13 from 7q31, complete sequence.    34  3.5  6

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54K91) RecName: Full=Acetyl-CoA hydrolase;          EC=3.1.2.1...   298   8e-80
AM920427_313(AM920427|pid:none) Penicillium chrysogenum Wisconsi...   209   3e-53
AP007151_504(AP007151|pid:none) Aspergillus oryzae RIB40 genomic...   207   1e-52
D89222_1(D89222|pid:none) Schizosaccharomyces pombe mRNA, partia...   199   3e-50
(Q9UUJ9) RecName: Full=Acetyl-CoA hydrolase;          EC=3.1.2.1...   199   5e-50
CP000698_3955(CP000698|pid:none) Geobacter uraniireducens Rf4, c...   198   7e-50
CP001390_726(CP001390|pid:none) Geobacter sp. FRC-32, complete g...   196   3e-49
AE017180_488(AE017180|pid:none) Geobacter sulfurreducens PCA, co...   196   4e-49
A36316(A36316) acu-8 protein - Neurospora crassa  &M31521_1(M315...   193   2e-48
CU633453_78(CU633453|pid:none) Podospora anserina genomic DNA ch...   192   4e-48

 psg: 0.85  gvh: 0.39  alm: 0.48  top: 0.30  tms: 0.00  mit: 0.24  mip: 0.02
 nuc: 0.00  erl: 0.00  erm: 0.60  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: nuclear
	 28.0 %: cytoplasmic
	  8.0 %: vacuolar
	  8.0 %: mitochondrial
	  4.0 %: extracellular, including cell wall

>> prediction for FC-AR13 is nuc

>FC-AR13Z.Seq
----------TTCACGTGTTGGTTGTATCGCTTTAAATACTCCATGTGAAGTTGATATCT
ATGGTCATGTCAATAGTACCAATACAATGGGTTCAAAAATGTTAAATGGTTTAGGTGGTA
GTGGTGAATTCTTAAGAAATTCAAGAATCTCCATTGTTCACACCCCATCAACTCGTCCAA
CTAAAACTGATCCACATGGTATTAGTTGTATCGTTCCTTTCGCCTCTCATATCGATCATA
CAGAACACGACATTGATATCATTGTAACCGAGCAAGGTTTAGCTGATATTCGTGGTTTGG
CACCTTATGAACGTGCTAAAGTTATCATTCAAAATTGTGCTCATCCAATCTATAAACCAA
TACTCATGGAATACCTTGAAACTTCTCGTCAAATTTGTTTAAAAAATCATATGGGACATG
AACCACATCAATTAGACAAAGCATTTAAATTTTATACAAATTTATCTGAAAAAGGTACTA
TGAAAATTGACAAGTGGTAAATAATAAAAATAAAAAATAAAAAATAAAAAATAAATAAAT
AAATAAAATGATTTAAAAAA