>FC-AR07 (FC-AR07Q) /CSM/FC/FC-AR/FC-AR07Q.Seq.d/
XXXXXXXXXXTAAACCAAAAGCTGCCCCAAAGAAGGAAGTCAAAGAAGACGCTGGTGACG
ATGAAGTCGATGAAAAACCAAAAAAGAAAAACCCATTAGATGAATTAGCTCCATCAACCT
TTGTTTTGGATGAATTCAAACGTACCTACTCCAACAATGAAGTCTCCATGTCCATTCCAT
GGTTCTTTGAACACTTTGACAAGGAAGGTTTCTCTGTCTACCAATGTACCTACCAATACA
ATCACGAATTAGGTCCAGTCTTCAAAACTTGCAACTTGGTTGGTGGTTTCTTCCAAAGAC
TCGAAACTCTCCACAAATACGCTTTCGCCTCTATGATCATTTTCGGTGAAGAACAAGGTG
GTGCCGTCAAAGATCAAACCGTCTCTGGTCTCTGGGTTTTCCGTGGTCAAGATTTACCAG
CTGACATGAAAGATTGTGATGATTCTTTAGTCTATGACTGGAAGAAACTCGATGTTGCTG
CTGATAAAGCTATCATTGAATCTTTCCTTGCTTGGGAAGATAAAAACGGTGGTTTCGCTG
GTAAGAAATTCTTACAAGGTAAATTATACAAATAAATTAATTTAAATTTAATTTAAAAAA
AAAAAAAAAAAAAA

---KPKAAPKKEVKEDAGDDEVDEKPKKKNPLDELAPSTFVLDEFKRTYSNNEVSMSIPW
FFEHFDKEGFSVYQCTYQYNHELGPVFKTCNLVGGFFQRLETLHKYAFASMIIFGEEQGG
AVKDQTVSGLWVFRGQDLPADMKDCDDSLVYDWKKLDVAADKAIIESFLAWEDKNGGFAG
KKFLQGKLYK*inlnli*kkkkkk

Frame A:
---KPKAAPKKEVKEDAGDDEVDEKPKKKNPLDELAPSTFVLDEFKRTYSNNEVSMSIPW
FFEHFDKEGFSVYQCTYQYNHELGPVFKTCNLVGGFFQRLETLHKYAFASMIIFGEEQGG
AVKDQTVSGLWVFRGQDLPADMKDCDDSLVYDWKKLDVAADKAIIESFLAWEDKNGGFAG
KKFLQGKLYK*inlnli*kkkkkk


Frame B:
---nqklpqrrkskktlvtmksmknqkrkth*mn*lhqplfwmnsnvptptmkspcpfhg
slntltrkvslstnvptntitn*vqssklatwlvvsskdsklstntlspl*sfsvknkvv
pskikpslvsgfsvvkiyqlt*kivmil*smtgrnsmllliklslnlsllgkiktvvslv
rnsykvnytnkli*i*fkkkkkk


Frame C:
---tkscpkegsqrrrw*r*sr*ktkkekpir*issinlcfg*iqtyllqq*slhvhsmv
l*tl*qgrflclpmylpiqsrirsslqnlqlgwwflpktrnspqirfrlydhfr*rtrwc
rqrsnrlwslgfpwsrfts*herl**ffsl*leetrccc**syh*ifpclgr*krwfrw*
eiltr*iiqin*fkfnlkkkkkk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VFL213 (VFL213Q) /CSM/VF/VFL2-A/VFL213Q.Seq.d/                        997   0.0
SLH694 (SLH694Q) /CSM/SL/SLH6-D/SLH694Q.Seq.d/                        997   0.0
SLH615 (SLH615Q) /CSM/SL/SLH6-A/SLH615Q.Seq.d/                        997   0.0
SLG662 (SLG662Q) /CSM/SL/SLG6-C/SLG662Q.Seq.d/                        997   0.0
SLF370 (SLF370Q) /CSM/SL/SLF3-C/SLF370Q.Seq.d/                        997   0.0
SLF351 (SLF351Q) /CSM/SL/SLF3-C/SLF351Q.Seq.d/                        997   0.0
SLF228 (SLF228Q) /CSM/SL/SLF2-B/SLF228Q.Seq.d/                        997   0.0
SLF226 (SLF226Q) /CSM/SL/SLF2-B/SLF226Q.Seq.d/                        997   0.0
SLE891 (SLE891Q) /CSM/SL/SLE8-D/SLE891Q.Seq.d/                        997   0.0
SLE847 (SLE847Q) /CSM/SL/SLE8-B/SLE847Q.Seq.d/                        997   0.0

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

BH133887|BH133887.1 ENTPB89TR Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    46  5e-05  2
AC144483|AC144483.2 Medicago truncatula clone mth2-12f13, WORKING DRAFT SEQUENCE, 6 unordered pieces.    48  0.12  1
AC116959|AC116959.2 Dictyostelium discoideum chromosome 2 map 4545040-4559643 strain AX4, complete sequence.    34  0.15  3
BF779350|BF779350.1 3181-75 hindgut and Malpighian tubule subtracted cDNA library Ctenocephalides felis cDNA clone 3181-75, mRNA sequence.    46  0.49  1
D14606|D14606.1 Yeast gene for elongation factor-1 gamma, complete cds.    34  1.00  2
AL929503|AL929503.4 Zebrafish DNA sequence from clone CH211-158I6.    40  1.2  2
BU234834|BU234834.1 603407791F1 CSEQCHN24 Gallus gallus cDNA clone ChEST320e23 5', mRNA sequence.    40  1.9  2
AC144417|AC144417.1 Rattus norvegicus clone CH230-321J10, WORKING DRAFT SEQUENCE, 41 unordered pieces.    44  1.9  1
AC023826|AC023826.6 Homo sapiens chromosome 16 clone RP11-380E14, complete sequence.    44  1.9  1
AC121964|AC121964.1 Mus musculus clone RP24-257N11, complete sequence.    44  1.9  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ448229_1(DQ448229|pid:none) Artemia franciscana clone 13RP10.0...   153   4e-36
(P12261) RecName: Full=Elongation factor 1-gamma;          Short...   152   5e-36
BC134217_1(BC134217|pid:none) Danio rerio zgc:163074, mRNA (cDNA...   152   7e-36
AF148813_1(AF148813|pid:none) Drosophila melanogaster translatio...   152   9e-36
(Q9NJH0) RecName: Full=Elongation factor 1-gamma;          Short...   152   9e-36
BT001612_1(BT001612|pid:none) Drosophila melanogaster RE32823 fu...   152   9e-36
AF148814_1(AF148814|pid:none) Drosophila melanogaster translatio...   152   9e-36
DQ440238_1(DQ440238|pid:none) Aedes aegypti clone AET-2855 elong...   150   2e-35
DQ680344_1(DQ680344|pid:none) Argiope argentata elongation facto...   150   3e-35
AY737542_1(AY737542|pid:none) Toxoptera citricida putative trans...   149   4e-35

 psg: 0.35  gvh: 0.32  alm: 0.49  top: 0.53  tms: 0.00  mit: 0.22  mip: 0.07
 nuc: 0.12  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: cytoplasmic
	 36.0 %: nuclear
	  8.0 %: cytoskeletal
	  8.0 %: mitochondrial

>> prediction for FC-AR07 is cyt

>FC-AR07Z.Seq
----------TAAACCAAAAGCTGCCCCAAAGAAGGAAGTCAAAGAAGACGCTGGTGACG
ATGAAGTCGATGAAAAACCAAAAAAGAAAAACCCATTAGATGAATTAGCTCCATCAACCT
TTGTTTTGGATGAATTCAAACGTACCTACTCCAACAATGAAGTCTCCATGTCCATTCCAT
GGTTCTTTGAACACTTTGACAAGGAAGGTTTCTCTGTCTACCAATGTACCTACCAATACA
ATCACGAATTAGGTCCAGTCTTCAAAACTTGCAACTTGGTTGGTGGTTTCTTCCAAAGAC
TCGAAACTCTCCACAAATACGCTTTCGCCTCTATGATCATTTTCGGTGAAGAACAAGGTG
GTGCCGTCAAAGATCAAACCGTCTCTGGTCTCTGGGTTTTCCGTGGTCAAGATTTACCAG
CTGACATGAAAGATTGTGATGATTCTTTAGTCTATGACTGGAAGAAACTCGATGTTGCTG
CTGATAAAGCTATCATTGAATCTTTCCTTGCTTGGGAAGATAAAAACGGTGGTTTCGCTG
GTAAGAAATTCTTACAAGGTAAATTATACAAATAAATTAATTTAAATTTAATTTAAAAAA
AAAAAAAAAAAAAA