>FC-IC1462 (FC-IC1462Q) /CSM/FC-IC/FC-IC1462Q.Seq.d/
ACCATCTTCAGAAAATGTAGCAGAAATTACAACATCAGTAATTAGCAATCCAACTTGTGA
TAATGGTCCTTTCTCTGATGGTATGATCAGAGTAGCTCTTAAATATGAAGGTAATCAAAT
TAATAATTTCACAATCCAAAATCAAGATGCAGAATTTACCTACCTTAATGATGGTGTTTA
CCCAATAGCAGGTGTTGGTGTAAATAGTTTAACAATTTCATATCTTTCTTGTATATGGAA
AAGAGATATTACAACAGT

PSSENVAEITTSVISNPTCDNGPFSDGMIRVALKYEGNQINNFTIQNQDAEFTYLNDGVY
PIAGVGVNSLTISYLSCIWKRDITT

Frame A:
tifrkcsrnynisn*qsnl**wsfl*wydqsss*i*r*sn**fhnpksrcriylp**wcl
pnsrcwck*fnnfisflymekryyns


Frame B:
PSSENVAEITTSVISNPTCDNGPFSDGMIRVALKYEGNQINNFTIQNQDAEFTYLNDGVY
PIAGVGVNSLTISYLSCIWKRDITT


Frame C:
hlqkm*qklqhq*laiqlvimvlslmv*se*llnmkvikliisqskikmqnlptlmmvft
q*qvlv*iv*qfhiflvygkeilqq

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

FC-IC1462 (FC-IC1462Q) /CSM/FC-IC/FC-IC1462Q.Seq.d/                   511   e-144
VHM122 (VHM122Q) /CSM/VH/VHM1-A/VHM122Q.Seq.d/                         34   0.97
VHD740 (VHD740Q) /CSM/VH/VHD7-B/VHD740Q.Seq.d/                         34   0.97
SSG276 (SSG276Q) /CSM/SS/SSG2-D/SSG276Q.Seq.d/                         34   0.97
FC-BG03 (FC-BG03Q) /CSM/FC/FC-BG/FC-BG03Q.Seq.d/                       34   0.97
CHK489 (CHK489Q) /CSM/CH/CHK4-D/CHK489Q.Seq.d/                         34   0.97
CFA623 (CFA623Q) /CSM/CF/CFA6-A/CFA623Q.Seq.d/                         34   0.97
AFL483 (AFL483Q) /CSM/AF/AFL4-D/AFL483Q.Seq.d/                         34   0.97
VSJ569 (VSJ569Q) /CSM/VS/VSJ5-C/VSJ569Q.Seq.d/                         32   3.8
VSE326 (VSE326Q) /CSM/VS/VSE3-B/VSE326Q.Seq.d/                         32   3.8

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC140081|AC140081.2 Danio rerio clone CH211-253G17 strain Tue, WORKING DRAFT SEQUENCE, 20 ordered pieces.    36   0.21   4
AL591416|AL591416.4 Human DNA sequence from clone RP11-108N13 on chromosome 6.    46   0.22   1
AQ636728|AQ636728.1 RPCI-11-481E19.TV RPCI-11 Homo sapiens genomic clone RPCI-11-481E19 , DNA sequence.    46   0.22   1
AE002113|AE002113.1 Ureaplasma urealyticum section 14 of 59 of the complete genome.    34   0.36   4
AC128215|AC128215.2 Rattus norvegicus clone CH230-34M11, *** SEQUENCING IN PROGRESS ***, 15 unordered pieces.    34   0.44   5
AC105373|AC105373.2 Felis catus clone RP86-126J16, WORKING DRAFT SEQUENCE, 5 ordered pieces.    42   0.73   5
AC003977|AC003977.1 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-542B9, complete sequence.    30   0.77   6
AC055754|AC055754.21 Homo sapiens 3 BAC RP11-4I2 (Roswell Park Cancer Institute Human BAC Library) complete sequence.    32   0.79   5
AP004953|AP004953.1 Lotus corniculatus var. japonicus genomic DNA, chromosome 3, clone:LjT34A24, TM0129.    36   0.81   5
CA972633|CA972633.1 AGENCOURT_10766135 Wellcome/CRC_pSK_egg Xenopus laevis cDNA clone IMAGE:6324486 5', mRNA sequence.    44   0.88   1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AP008217_1397(AP008217|pid:none) Oryza sativa (japonica cultivar...    32   5.3
BA000026_280(BA000026|pid:none) Mycoplasma penetrans HF-2 DNA, c...    32   9.1

 psg: 0.75  gvh: 0.27  alm: 0.37  top: 0.53  tms: 0.00  mit: 0.26  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: nuclear
	 32.0 %: cytoplasmic
	 12.0 %: mitochondrial
	  8.0 %: plasma membrane
	  4.0 %: cytoskeletal
	  4.0 %: vacuolar

>> prediction for FC-IC1462 is nuc

>FC-IC1462F.Seq
ACCATCTTCAGAAAATGTAGCAGAAATTACAACATCAGTAATTAGCAATCCAACTTGTGA
TAATGGTCCTTTCTCTGATGGTATGATCAGAGTAGCTCTTAAATATGAAGGTAATCAAAT
TAATAATTTCACAATCCAAAATCAAGATGCAGAATTTACCTACCTTAATGATGGTGTTTA
CCCAATAGCAGGTGTTGGTGTAAATAGTTTAACAATTTCATATCTTTCTTGTATATGGAA
AAGAGATATTACAACAGTNNNNNNNNNN

>FC-IC1462Z.Seq
NNNNNNNNNNACCATCTTCAGAAAATGTAGCAGAAATTACAACATCAGTAATTAGCAATC
CAACTTGTGATAATGGTCCTTTCTCTGATGGTATGATCAGAGTAGCTCTTAAATATGAAG
GTAATCAAATTAATAATTTCACAATCCAAAATCAAGATGCAGAATTTACCTACCTTAATG
ATGGTGTTTACCCAATAGCAGGTGTTGGTGTAAATAGTTTAACAATTTCATATCTTTCTT
GTATATGGAAAAGAGATATTACAACAGT

>FC-IC1462P.Seq
ACCATCTTCAGAAAATGTAGCAGAAATTACAACATCAGTAATTAGCAATCCAACTTGTGA
TAATGGTCCTTTCTCTGATGGTATGATCAGAGTAGCTCTTAAATATGAAGGTAATCAAAT
TAATAATTTCACAATCCAAAATCAAGATGCAGAATTTACCTACCTTAATGATGGTGTTTA
CCCAATAGCAGGTGTTGGTGTAAATAGTTTAACAATTTCATATCTTTCTTGTATATGGAA
AAGAGATATTACAACAGT----------ACCATCTTCAGAAAATGTAGCAGAAATTACAA
CATCAGTAATTAGCAATCCAACTTGTGATAATGGTCCTTTCTCTGATGGTATGATCAGAG
TAGCTCTTAAATATGAAGGTAATCAAATTAATAATTTCACAATCCAAAATCAAGATGCAG
AATTTACCTACCTTAATGATGGTGTTTACCCAATAGCAGGTGTTGGTGTAAATAGTTTAA
CAATTTCATATCTTTCTTGTATATGGAAAAGAGATATTACAACAGT

>FC-IC1462E.Seq
ACCATCTTCAGAAAATGTAGCAGAAATTACAACATCAGTAATTAGCAATCCAACTTGTGA
TAATGGTCCTTTCTCTGATGGTATGATCAGAGTAGCTCTTAAATATGAAGGTAATCAAAT
TAATAATTTCACAATCCAAAATCAAGATGCAGAATTTACCTACCTTAATGATGGTGTTTA
CCCAATAGCAGGTGTTGGTGTAAATAGTTTAACAATTTCATATCTTTCTTGTATATGGAA
AAGAGATATTACAACAGT