>FC-IC1312 (FC-IC1312Q) /CSM/FC-IC/FC-IC1312Q.Seq.d/
XXXXXXXXXXTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACAATACCAAGAATG
TTTTTATTTTCACTTTTATTTTTATTTTATTTTATTTTAAATTTTAGTGATATAAATATA
TTTGTATTTATTAATCAAATGATTAATTACAAATATGGAGGAAATTTTGGCAAAGAGAGG
TTGGATTTATGTGATCTTGAATTTCATTAACAATTGCATCAAAATTTTCACTTATAATTT
TTTCACATTGATTTTCAATTGTTGGTATGAATGAGAAAAAGTATTTACATTCTTTTAAAA
GTTGTGCTTCAACATCACCTGAATTTTCAACAATTTCAATAGCATCATTAGCGAAATCTA
AACAAAGATCACATAGAGTGGT

---FFFFFFFFFFFTIPRMFLFSLLFLFYFILNFSDINIFVFINQMINYKYGGNFGKERL
DLCDLEFH*qlhqnfhl*ffhidfqllv*mrksiyillkvvlqhhlnfqqfq*hh*rnln
kdhiew

Frame A:
---fffffffffffyntknvfiftfifilfyfkf**ykyiciy*snd*lqiwrkfwqrev
gfm*s*isltiaskfsliifsh*fsivgmnekkylhsfkscastspefstisiaslaksk
qrshrv


Frame B:
---FFFFFFFFFFFTIPRMFLFSLLFLFYFILNFSDINIFVFINQMINYKYGGNFGKERL
DLCDLEFH*qlhqnfhl*ffhidfqllv*mrksiyillkvvlqhhlnfqqfq*hh*rnln
kdhiew


Frame C:
---fffffffffflqyqecfyfhfyfyfilf*ilvi*iylyllik*litnmeeilakrgw
iyvilnfinncikiftynfftlifncwye*ekvftff*klcfnit*ifnnfnsiisei*t
kit*sg

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VSD193 (VSD193Q) /CSM/VS/VSD1-D/VSD193Q.Seq.d/                        547   e-155
FC-IC1312 (FC-IC1312Q) /CSM/FC-IC/FC-IC1312Q.Seq.d/                   547   e-155
VSH542 (VSH542Q) /CSM/VS/VSH5-B/VSH542Q.Seq.d/                        442   e-123
VHB857 (VHB857Q) /CSM/VH/VHB8-C/VHB857Q.Seq.d/                         40   0.024
SSF768 (SSF768Q) /CSM/SS/SSF7-C/SSF768Q.Seq.d/                         38   0.093
SLC138 (SLC138Q) /CSM/SL/SLC1-B/SLC138Q.Seq.d/                         38   0.093
VSI505 (VSI505Q) /CSM/VS/VSI5-A/VSI505Q.Seq.d/                         36   0.37
VHA580 (VHA580Q) /CSM/VH/VHA5-D/VHA580Q.Seq.d/                         36   0.37
SSJ196 (SSJ196Q) /CSM/SS/SSJ1-D/SSJ196Q.Seq.d/                         36   0.37
SSH576 (SSH576Q) /CSM/SS/SSH5-D/SSH576Q.Seq.d/                         36   0.37

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AL356804|AL356804.4 Human chromosome 14 DNA sequence BAC R-718G2 of library RPCI-11 from chromosome 14 of Homo sapiens (Human).    38   3e-04  6
AC142558|AC142558.2 Carollia perspicillata clone 36K12, WORKING DRAFT SEQUENCE, 3 ordered pieces.    50   6e-04  4
AB063521|AB063521.2 Wigglesworthia brevipalpis DNA, complete genome, section 1/2.    42   8e-04  11
AC129208|AC129208.4 Mus musculus BAC clone RP24-282E2 from chromosome 15, complete sequence.    44   0.002  6
AC146419|AC146419.1 Pan troglodytes chromosome UNK clone RP43-27N2, *** SEQUENCING IN PROGRESS ***, 45 unordered pieces.    44   0.005  2
AX196296|AX196296.1 Sequence 3 from Patent WO0151627.              36   0.005  7
AX196295|AX196295.1 Sequence 2 from Patent WO0151627.              36   0.005  7
AL844505|AL844505.1 Plasmodium falciparum chromosome  6.           32   0.008  16
AP002782|AP002782.3 Homo sapiens genomic DNA, chromosome 11q clone:RP11-660M18, complete sequences.    34   0.009  10
AL049184|AL049184.5 Plasmodium falciparum DNA *** SEQUENCING IN PROGRESS *** from  MAL13P3.    34   0.009  9

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000262_3(AF000262|pid:none) Caenorhabditis elegans cosmid C48E...    53   3e-06
(Q24824) RecName: Full=Pore-forming peptide ameobapore B; AltNam...    42   0.005
AY485648_1(AY485648|pid:none) Trichinella spiralis prosaposin mR...    42   0.008
AF082528_1(AF082528|pid:none) Entamoeba dispar strain SAW 142 po...    40   0.025
T16599(T16599)hypothetical protein K09F5.3 - Caenorhabditis eleg...    40   0.032
U37430_3(U37430|pid:none) Caenorhabditis elegans cosmid K09F5, c...    40   0.032
B89567(B89567)protein T08A9.7 [imported] - Caenorhabditis elegans      39   0.042
AF196308_1(AF196308|pid:none) Naegleria fowleri naegleriapore A ...    39   0.072
U40417_4(U40417|pid:none) Caenorhabditis elegans cosmid T08A9, c...    37   0.21
Z66566_3(Z66566|pid:none) Caenorhabditis elegans Cosmid T25C12, ...    37   0.27

 psg: 1.06  gvh: 0.59  alm: 0.27  top: 0.40  tms: 0.07  mit: 0.31  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 1.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 28.0 %: endoplasmic reticulum
	 24.0 %: nuclear
	 16.0 %: cytoplasmic
	 12.0 %: mitochondrial
	  8.0 %: Golgi
	  4.0 %: plasma membrane
	  4.0 %: vesicles of secretory system
	  4.0 %: extracellular, including cell wall

>> prediction for FC-IC1312 is end

>FC-IC1312Z.Seq
NNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACAATACCAAGAATG
TTTTTATTTTCACTTTTATTTTTATTTTATTTTATTTTAAATTTTAGTGATATAAATATA
TTTGTATTTATTAATCAAATGATTAATTACAAATATGGAGGAAATTTTGGCAAAGAGAGG
TTGGATTTATGTGATCTTGAATTTCATTAACAATTGCATCAAAATTTTCACTTATAATTT
TTTCACATTGATTTTCAATTGTTGGTATGAATGAGAAAAAGTATTTACATTCTTTTAAAA
GTTGTGCTTCAACATCACCTGAATTTTCAACAATTTCAATAGCATCATTAGCGAAATCTA
AACAAAGATCACATAGAGTGGT