>FC-IC1236 (FC-IC1236Q) /CSM/FC-IC/FC-IC1236Q.Seq.d/
XXXXXXXXXXACCTATAGTGAACTAAAAGAAAAAGGTATTGATTTTGAATCAATTATGAA
AACAAAGAAATTAAATATTGATGAAAATGATCAATCATCGACATCAACAACAGATAAAAA
AAGTTCAACATCATCATCATCATCAGAATTAAAAAAATCAACATCATTATTAAATTCAAC
AAAAGAATTAGATATTAATACAATTATTAGTGAAAAGAATGATCCAAATTTAATTGAAAA
AGCTAAATTATTAGTAAAAGAGGATAGAAATGAAGGTGAAGTTGGTTTTGNAGTTTATAG
ACAATATTTTAGACATGGATCATTAAATTTATTCTTTTNAACTTGTGCNCTTTATTTCAT
NAGNCNAATCATTTTCCAATTNTCAGATTTTTGGTTCACCATTTGGACCAATGATGAGAA
CCAGTCACACATGNTGANAATATANNNCATTTTATANTAGTGNANNTNATTGGTGCANTC
ACTGTGTTTTNAGTGGT

---YSELKEKGIDFESIMKTKKLNIDENDQSSTSTTDKKSSTSSSSSELKKSTSLLNSTK
ELDINTIISEKNDPNLIEKAKLLVKEDRNEGEVGFXVYRQYFRHGSLNLFFXTCALYFXX
XIIFQXSDFWFTIWTNDENQSHMXXIXXILX*xxxlvxslcfxw

Frame A:
---pivn*kkkvlilnql*kqrn*ilmkminhrhqqqikkvqhhhhhqn*knqhhy*iqq
kn*iliqllvkrmiqi*lkklny**kriemkvklvlxfidnildmdh*iysfxlvxfisx
xxsfsnxqifgspfgpmmrtshtx*xyxxfyxsxxxwcxhcvxsg


Frame B:
---l**tkrkry*f*inyenkeiky**k*siidinnr*kkfniiiiirikkiniiikfnk
riry*yny**ke*skfn*ks*iiskrg*k*r*swfxsl*tif*twiikfilxnlcxlfhx
xnhfpixrflvhhldq**epvthxxnixhfixvxxigaxtvfxv


Frame C:
---YSELKEKGIDFESIMKTKKLNIDENDQSSTSTTDKKSSTSSSSSELKKSTSLLNSTK
ELDINTIISEKNDPNLIEKAKLLVKEDRNEGEVGFXVYRQYFRHGSLNLFFXTCALYFXX
XIIFQXSDFWFTIWTNDENQSHMXXIXXILX*xxxlvxslcfxw

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

FC-IC1236 (FC-IC1236Q) /CSM/FC-IC/FC-IC1236Q.Seq.d/                   769   0.0
FC-IC1233 (FC-IC1233Q) /CSM/FC-IC/FC-IC1233Q.Seq.d/                   676   0.0
VHF815 (VHF815Q) /CSM/VH/VHF8-A/VHF815Q.Seq.d/                         96   6e-19
VHB817 (VHB817Q) /CSM/VH/VHB8-A/VHB817Q.Seq.d/                         96   6e-19
VHB717 (VHB717Q) /CSM/VH/VHB7-A/VHB717Q.Seq.d/                         96   6e-19
SSA146 (SSA146Q) /CSM/SS/SSA1-B/SSA146Q.Seq.d/                         44   0.002
SHD729 (SHD729Q) /CSM/SH/SHD7-B/SHD729Q.Seq.d/                         44   0.002
AHN288 (AHN288Q) /CSM/AH/AHN2-D/AHN288Q.Seq.d/                         44   0.002
AHN221 (AHN221Q) /CSM/AH/AHN2-A/AHN221Q.Seq.d/                         44   0.002
VSJ830 (VSJ830Q) /CSM/VS/VSJ8-B/VSJ830Q.Seq.d/                         42   0.008

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AF474334|AF474334.1 Dictyostelium discoideum ABC transporter ABCC.2 (abcC2) gene, complete cds.   466   0.0    3
AF474345|AF474345.1 Dictyostelium discoideum ABC transporter ABCC.13 (abcC13) gene, partial cds.    94   2e-37  4
AF474333|AF474333.1 Dictyostelium discoideum ABC transporter ABCC.1 (abcC1) gene, complete cds.    96   1e-28  4
AF474338|AF474338.1 Dictyostelium discoideum ABC transporter ABCC.6 (abcC6) gene, complete cds.    82   2e-23  3
AY082376|AY082376.1 Dictyostelium discoideum ABC transporter ABCC.14 gene, complete cds; and unknown gene.    84   4e-19  4
AF474343|AF474343.1 Dictyostelium discoideum ABC transporter ABCC.11 (abcC11) gene, partial cds.    56   2e-17  3
AF474339|AF474339.1 Dictyostelium discoideum ABC transporter ABCC.7 (abcC7) gene, complete cds.    76   2e-10  2
AF474341|AF474341.1 Dictyostelium discoideum ABC transporter ABCC.9 (abcC9) gene, complete cds.    56   4e-10  4
AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 map 1005175-1418323 strain AX4, complete sequence.    38   6e-10  15
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 map 1685067-2090751 strain AX4, complete sequence.    44   4e-09  15

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54VJ0) RecName: Full=ABC transporter C family member 2; AltNam...   191   1e-47
(Q54V86) RecName: Full=ABC transporter C family member 13; AltNa...   127   2e-28
(Q8T6H8) RecName: Full=ABC transporter C family member 1; AltNam...   123   3e-27
(Q8T6H3) RecName: Full=ABC transporter C family member 6; AltNam...   114   2e-24
AY082376_1(AY082376|pid:none) Dictyostelium discoideum ABC trans...    99   4e-20
(Q54K24) RecName: Full=ABC transporter C family member 14; AltNa...    99   4e-20
AF474343_1(AF474343|pid:none) Dictyostelium discoideum ABC trans...    87   2e-16
AF474339_1(AF474339|pid:none) Dictyostelium discoideum ABC trans...    74   2e-12
(Q54EK2) RecName: Full=ABC transporter C family member 7; AltNam...    74   2e-12
CT005268_128(CT005268|pid:none) Leishmania major strain Friedlin...    44   0.003

 psg: 0.75  gvh: 0.27  alm: 0.37  top: 0.53  tms: 0.00  mit: 0.19  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: cytoplasmic
	 44.0 %: nuclear
	  4.0 %: cytoskeletal
	  4.0 %: vacuolar
	  4.0 %: plasma membrane

>> prediction for FC-IC1236 is cyt

>FC-IC1236Z.Seq
NNNNNNNNNNACCTATAGTGAACTAAAAGAAAAAGGTATTGATTTTGAATCAATTATGAA
AACAAAGAAATTAAATATTGATGAAAATGATCAATCATCGACATCAACAACAGATAAAAA
AAGTTCAACATCATCATCATCATCAGAATTAAAAAAATCAACATCATTATTAAATTCAAC
AAAAGAATTAGATATTAATACAATTATTAGTGAAAAGAATGATCCAAATTTAATTGAAAA
AGCTAAATTATTAGTAAAAGAGGATAGAAATGAAGGTGAAGTTGGTTTTGNAGTTTATAG
ACAATATTTTAGACATGGATCATTAAATTTATTCTTTTNAACTTGTGCNCTTTATTTCAT
NAGNCNAATCATTTTCCAATTNTCAGATTTTTGGTTCACCATTTGGACCAATGATGAGAA
CCAGTCACACATGNTGANAATATANNNCATTTTATANTAGTGNANNTNATTGGTGCANTC
ACTGTGTTTTNAGTGGT