>FC-IC0568 (FC-IC0568Q) /CSM/FC-IC/FC-IC0568Q.Seq.d/
ACAAAGAGACCACCAGAAATTAAAGATAAGAAACCACCAACAACAATTAAAATAACAGTG
ATGGCATAACGGAAGGAATCAACTTTATAGGCTTTGGTAAGGATATCAATTTGTTCTTGA
GTGGCTGCGATGATATTGACACCCCAAAACATTGGATGAACAACATCAGAACGGAAAGCA
GAGTATTTATTGTAGAGAGTAGAGTTAGTTCCATCAGAACCTTGAATGTAGGTATTTACT
TGAAGTGAGTAACGACCGTGAATAGCTTTACCAGAACGTGGTTCATAATCGGCGAAAACG
TCGAGATCTTCATCATCATTGATTAAATCGGTGATACCAGCTTTATAATAATAACCAACA
TCGATACCCTTTAATCTTGGTCTGCTAAGATAGGCTGGAGCACCACTTTTAATGCTTGTA
AGATTTAAAAGATATGGAATGGTTTGGAAATAGTCTGGATTAATTTCCCAATTGGATTCA
TTGATTCTATAACGATAGTATGGAATACCACCAAAGTTACCACCAACTTCCTTTCTGAAT
GAAAGTGATCTTGCAAATTCATCAGTAAAGACATTAACTGGTGCTTCTGGATCTTTGGAG
AGATATGATGGTGGTAATTGTTCAGCGAATGAACCACTAACTTTAATTTTTTGGTTATAG
TTTAATTCTTCTTCACCTTCGAATGTGATTGGAGATGAAACTAAATCAATATCACCAACA
CCTGTATAGATTTCATCAGTGTGTAAXXXXXXXXXX

kettrn*r*ettnnn*NNSDGITEGINFIGFGKDINLFLSGCDDIDTPKHWMNNIRTESR
VFIVESRVSSIRTLNVGIYLK*vttvnsftrtwfiigenveifiiid*igdtsfiiitni
dtl*swsakigwsttfnacki*kiwngleivwinfpigfidsitivwnttkvttnflse*
k*sckfiskdinwcfwifgei*ww*lfse*ttnfnflviv*ffftfecdwr*n*initnt
cidfisv---

Frame A:
tkrppeikdkkppttikitvma*rkestl*alvrisics*vaamiltpqnig*ttserka
eyll*rvelvpsep*m*vft*se*rp*ialpergs*saktsrssssliksvipal***pt
sipfnlgllr*agapllmlvrfkrygmvwk*sglisqldslil*r*ygippklpptsfln
esdlanssvktltgasgslerydggncsanepltlifwl*fnssspsnvigdetksispt
pv*issvc---


Frame B:
qrdhqklkirnhqqqlk*q*whngrnqlyrlw*gyqfvlewlr*y*hpktldeqhqngkq
siycre*s*fhqnlecryllevsndre*lyqnvvhnrrkrrdlhhh*lnr*yqlynnnqh
ryplilvc*drlehhf*cl*dlkdmewfgnsld*fpnwih*fyndsmeyhqsyhqlpf*m
kvilqihq*rh*lvlldlwrdmmvvivqrmnh*l*ffgyslillhlrm*lemklnqyhqh
lyrfhqcv---


Frame C:
kettrn*r*ettnnn*NNSDGITEGINFIGFGKDINLFLSGCDDIDTPKHWMNNIRTESR
VFIVESRVSSIRTLNVGIYLK*vttvnsftrtwfiigenveifiiid*igdtsfiiitni
dtl*swsakigwsttfnacki*kiwngleivwinfpigfidsitivwnttkvttnflse*
k*sckfiskdinwcfwifgei*ww*lfse*ttnfnflviv*ffftfecdwr*n*initnt
cidfisv---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

FC-IC0568 (FC-IC0568Q) /CSM/FC-IC/FC-IC0568Q.Seq.d/                  1479   0.0
FC-IC1396 (FC-IC1396Q) /CSM/FC-IC/FC-IC1396Q.Seq.d/                  1433   0.0
VHB736 (VHB736Q) /CSM/VH/VHB7-B/VHB736Q.Seq.d/                       1402   0.0
VHJ811 (VHJ811Q) /CSM/VH/VHJ8-A/VHJ811Q.Seq.d/                       1398   0.0
VHH864 (VHH864Q) /CSM/VH/VHH8-C/VHH864Q.Seq.d/                       1279   0.0
SSD382 (SSD382Q) /CSM/SS/SSD3-D/SSD382Q.Seq.d/                       1156   0.0
VHF161 (VHF161Q) /CSM/VH/VHF1-C/VHF161Q.Seq.d/                       1152   0.0
SHK633 (SHK633Q) /CSM/SH/SHK6-B/SHK633Q.Seq.d/                       1148   0.0
VHC696 (VHC696Q) /CSM/VH/VHC6-D/VHC696Q.Seq.d/                       1142   0.0
FC-BK09 (FC-BK09Q) /CSM/FC/FC-BK/FC-BK09Q.Seq.d/                     1082   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AF238324|AF238324.1 Dictyostelium discoideum lysosomal integral membrane protein II (lmpB) mRNA, complete cds.  1471   0.0    1
CA528226|CA528226.1 8064-39 Mouse E14.5 retina lambda ZAP II Library Mus musculus cDNA, mRNA sequence.    42   0.34   2
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4, complete sequence.    32   0.36   14
BB496214|BB496214.2 Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched library, clone:D630001M21, 3' end partial sequence.    42   0.37   2
BV070511|BV070511.1 S212P6530FG8.T0 CZECHII/Ei Mus musculus STS genomic, sequence tagged site.    42   0.39   2
AZ186439|AZ186439.1 SP_1006_B2_G05_T7A Strongylocentrotus purpuratus, purple sea urchin , sperm genomic BAC library Strongylocentrotus purpuratus genomic clone Plate=1006 Col=10 Row=N, DNA sequence.    40   0.45   2
AC116960|AC116960.2 Dictyostelium discoideum chromosome 2 map complement(1004496-821614) strain AX4, complete sequence.    32   0.47   11
AZ841841|AZ841841.1 2M0140M11F Mouse 10kb plasmid UUGC1M library Mus musculus genomic clone UUGC2M0140M11 F, DNA sequence.    42   0.78   2
BM884229|BM884229.1 rc20f12.y1 Meloidogyne hapla egg pAMP1 v1 Meloidogyne hapla cDNA 5' similar to TR:Q9Y1V9 Q9Y1V9 HRZF-1. ;, mRNA sequence.    32   0.97   3
AC116101|AC116101.2 Dictyostelium discoideum chromosome 2 map complement(427476-387492) strain AX4, complete sequence.    32   1.2    5

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q9BKJ9) RecName: Full=Lysosome membrane protein 2-B; AltName: F...   478   e-134
(Q55FQ9) RecName: Full=Lysosome membrane protein 2-C; AltName: F...    60   7e-08
AF238325_1(AF238325|pid:none) Dictyostelium discoideum lysosomal...    60   7e-08
DQ914655_1(DQ914655|pid:none) Salmo salar scavenger receptor cla...    59   1e-07
(P97943) RecName: Full=Scavenger receptor class B member 1;     ...    54   4e-06
AY451993_1(AY451993|pid:none) Rattus norvegicus scavenger recept...    54   4e-06
AY682847_1(AY682847|pid:none) Rattus norvegicus scavenger recept...    54   4e-06
(Q60417) RecName: Full=Scavenger receptor class B member 1;     ...    54   7e-06
AY283278_1(AY283278|pid:none) Oryctolagus cuniculus scavenger re...    53   9e-06
AY283277_1(AY283277|pid:none) Oryctolagus cuniculus scavenger re...    53   9e-06

 psg: 0.75  gvh: 0.41  alm: 0.46  top: 0.53  tms: 0.00  mit: 0.21  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: cytoplasmic
	 32.0 %: nuclear
	  8.0 %: cytoskeletal
	  8.0 %: mitochondrial
	  4.0 %: endoplasmic reticulum

>> prediction for FC-IC0568 is cyt

>FC-IC0568F.Seq
ACAAAGAGACCACCAGAAATTAAAGATAAGAAACCACCAACAACAATTAAAATAACAGTG
ATGGCATAACGGAAGGAATCAACTTTATAGGCTTTGGTAAGGATATCAATTTGTTCTTGA
GTGGCTGCGATGATATTGACACCCCAAAACATTGGATGAACAACATCAGAACGGAAAGCA
GAGTATTTATTGTAGAGAGTAGAGTTAGTTCCATCAGAACCTTGAATGTAGGTATTTACT
TGAAGTGAGTAACGACCGTGAATAGCTTTACCAGAACGTGGTTCATAATCGGCGAAAACG
TCGAGATCTTCATCATCATTGATTAAATCGGTGATACCAGCTTTATAATAATAACCAACA
TCGATACCCTTTAATCTTGGTCTGCTAAGATAGGCTGGAGCACCACTTTTAATGCTTGTA
AGATTTAAAAGATATGGAATGGTTTGGAAATAGTCTGGATTAATTTCCCAATTGGATTCA
TTGATTCTATAACGATAGTATGGAATACCACCAAAGTTACCACCAACTTCCTTTCTGAAT
GAAAGTGATCTTGCAAATTCATCAGTAAAGACATTAACTGGTGCTTCTGGATCTTTGGAG
AGATATGATGGTGGTAATTGTTCAGCGAATGAACCACTAACTTTAATTTTTTGGTTATAG
TTTAATTCTTCTTCACCTTCGAATGTGATTGGAGATGAAACTAAATCAATATCACCAACA
CCTGTATAGATTTCATCAGTGTGTAANNNNNNNNNN