>FC-IC0169 (FC-IC0169Q) /CSM/FC-IC/FC-IC0169Q.Seq.d/
ACAAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTAATTTTTTTTAA
AATTAAAATTATATTTTTATTTTATTTTATTTTTATTTTATTTAATTTAATTCGTCAATT
ACAACTTGAGTTGAATCATTTAAAATATCATCAACTAATTGATTATATAATTCATTAATA
TCAATGAAATCACCAATAGCAGAAGGAATTGAAGAGGATAAAGTATTTAAGAGTGGTTTA
GTTAATGGATTAATAATTTTACAAAGAGTTGGTTTAACCATTTCACGTXXXXXXXXXX

QAFFFFFFFFFFFFLLIFFKIKIIFLFYFIFILFNLIRQLQLELNHLKYHQLIDYIIH*y
q*nhq*qkelkrikylrvv*lmd**fykelv*pfh---

Frame A:
tsfffffffffffffinff*n*nyifilfyfyfi*fnssitt*vesfkisstn*lynsli
smkspiaegieedkvfksglvngliilqrvgltis---


Frame B:
QAFFFFFFFFFFFFLLIFFKIKIIFLFYFIFILFNLIRQLQLELNHLKYHQLIDYIIH*y
q*nhq*qkelkrikylrvv*lmd**fykelv*pfh---


Frame C:
klffffffffffffy*fflklklyfyfilflfyli*fvnynls*ii*niin*lii*fini
neitnsrrn*rg*si*ewfs*winnftkswfnhft---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

FC-IC1663 (FC-IC1663Q) /CSM/FC-IC/FC-IC1663Q.Seq.d/                   355   2e-97
FC-IC0169 (FC-IC0169Q) /CSM/FC-IC/FC-IC0169Q.Seq.d/                   355   2e-97
VFN135 (VFN135Q) /CSM/VF/VFN1-B/VFN135Q.Seq.d/                        349   1e-95
CFI375 (CFI375Q) /CSM/CF/CFI3-D/CFI375Q.Seq.d/                        319   1e-86
SSE744 (SSE744Q) /CSM/SS/SSE7-B/SSE744Q.Seq.d/                         38   0.072
VFL494 (VFL494Q) /CSM/VF/VFL4-D/VFL494Q.Seq.d/                         34   1.1
VFG551 (VFG551Q) /CSM/VF/VFG5-C/VFG551Q.Seq.d/                         34   1.1
VFF438 (VFF438Q) /CSM/VF/VFF4-B/VFF438Q.Seq.d/                         34   1.1
VFA118 (VFA118Q) /CSM/VF/VFA1-A/VFA118Q.Seq.d/                         34   1.1
SSC614 (SSC614Q) /CSM/SS/SSC6-A/SSC614Q.Seq.d/                         34   1.1

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AF268054|AF268054.1 Candidatus Carsonella ruddii natural-host Aphalara longicaudata RNA polymerase beta subunit (rpoB) and RNA polymerase beta-prime subunit (rpoC) genes, partial cds.    42   0.057  2
AC016470|AC016470.2 Homo sapiens chromosome 4 clone RP11-464H18 map 4, LOW-PASS SEQUENCE SAMPLING.    38   0.16   2
AL663073|AL663073.9 Mouse DNA sequence from clone RP23-197O6 on chromosome X.    36   0.21   4
AE016748|AE016748.1 Staphylococcus epidermidis ATCC 12228, section 5 of 9 of the complete genome.    34   0.45   7
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 map 1685067-2090751 strain AX4, complete sequence.    36   0.54   8
AE006139|AE006139.1 Pasteurella multocida PM70 section 106 of 204 of the complete genome.    34   0.62   2
AE014843|AE014843.1 Plasmodium falciparum 3D7 chromosome 11 section 8 of 8 of the complete sequence.    36   0.84   7
AX392735|AX392735.1 Sequence 25 from Patent WO0212526.             34   0.91   4
AP004170|AP004170.1 Mycoplasma penetrans genomic DNA, complete sequence, section 1/5.    44   1.0    1
AL844506|AL844506.1 Plasmodium falciparum chromosome  7.           44   1.0    1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(P16154) RecName: Full=Toxin A;  &AX036226_1(AX036226|pid:none) ...    35   0.60
A37052(A37052;A60991;S21897;S22437;S08638) toxin A - Clostridium...    35   0.60
AM180355_680(AM180355|pid:none) Clostridium difficile 630 comple...    35   0.60

 psg: 1.06  gvh: 0.51  alm: 0.13  top: 0.60  tms: 0.13  mit: 0.29  mip: 0.07
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 1.00  m_ : 0.00 

	 32.0 %: endoplasmic reticulum
	 16.0 %: vacuolar
	 16.0 %: plasma membrane
	 12.0 %: nuclear
	 12.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: Golgi
	  4.0 %: cytoplasmic

>> prediction for FC-IC0169 is end

>FC-IC0169F.Seq
ACAAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTAATTTTTTTTAA
AATTAAAATTATATTTTTATTTTATTTTATTTTTATTTTATTTAATTTAATTCGTCAATT
ACAACTTGAGTTGAATCATTTAAAATATCATCAACTAATTGATTATATAATTCATTAATA
TCAATGAAATCACCAATAGCAGAAGGAATTGAAGAGGATAAAGTATTTAAGAGTGGTTTA
GTTAATGGATTAATAATTTTACAAAGAGTTGGTTTAACCATTTCACGT----------