>FC-IC0102 (FC-IC0102Q) /CSM/FC-IC/FC-IC0102Q.Seq.d/
ACTTCATATGGTTGCGCAAAGACAATATGTCCAGATAAATCTGAAGTTTCATGTTCATAT
TACCCAGCAGGTGGATTTAAGGGTGTTCTTCCTTATACTCCAAAAACAACAACCCCAGCT
CCAACTACACCAGCTCCAACCACACCAAAACCAACCACACCAGCTCCAACTACTCCAAAA
CCAACAACACCAGCTCCAACCACCCCAAAACCAACAACACCAGCTCCAACCACTCCAAAA
CCAACCACACCAGCTCCAACTACTCCAAAACCAACAACACCAGCCCCAACAACACCAGCC
CCAACATCAACTCTTACAGTAGATNGGACTTCATACCAAACTCCAATANNAGATCNAGGA
CAATGCGGATCATGTTGGGCATNTNGCTAGTAGCTGCAGACACTTNAATCTCGTNACCTT
TATTAAATATGNGTXXXXXXXXXX

TSYGCAKTICPDKSEVSCSYYPAGGFKGVLPYTPKTTTPAPTTPAPTTPKPTTPAPTTPK
PTTPAPTTPKPTTPAPTTPKPTTPAPTTPKPTTPAPTTPAPTSTLTVDXTSYQTPIXDXG
QCGSCWAXX**lqtlxsrxly*ix---

Frame A:
TSYGCAKTICPDKSEVSCSYYPAGGFKGVLPYTPKTTTPAPTTPAPTTPKPTTPAPTTPK
PTTPAPTTPKPTTPAPTTPKPTTPAPTTPKPTTPAPTTPAPTSTLTVDXTSYQTPIXDXG
QCGSCWAXX**lqtlxsrxly*ix---


Frame B:
lhmvaqrqyvqinlkfhvhitqqvdlrvfflilqkqqpqlqlhqlqphqnqphqlqllqn
qqhqlqppqnqqhqlqplqnqphqlqllqnqqhqpqqhqpqhqllq*xglhtklqxxixd
nadhvghxasscrhxnlvtfikyx---


Frame C:
fiwlrkdnmsr*i*sfmfilpsrwi*gcsslysknnnpssnytssnhtktnhtssnyskt
nntssnhpktnntssnhsktnhtssnysktnntspnntspninsysrxdfipnsnxrsrt
mrimlgxxlvaadtxisxpllnm---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

FC-IC0102 (FC-IC0102Q) /CSM/FC-IC/FC-IC0102Q.Seq.d/                   248   6e-65
FC-IC1785 (FC-IC1785Q) /CSM/FC-IC/FC-IC1785Q.Seq.d/                   192   3e-48
FC-IC1764 (FC-IC1764Q) /CSM/FC-IC/FC-IC1764Q.Seq.d/                   192   3e-48
FC-IC1753 (FC-IC1753Q) /CSM/FC-IC/FC-IC1753Q.Seq.d/                   192   3e-48
FC-IC1748 (FC-IC1748Q) /CSM/FC-IC/FC-IC1748Q.Seq.d/                   192   3e-48
FC-IC1735 (FC-IC1735Q) /CSM/FC-IC/FC-IC1735Q.Seq.d/                   192   3e-48
FC-IC1728 (FC-IC1728Q) /CSM/FC-IC/FC-IC1728Q.Seq.d/                   192   3e-48
FC-IC1720 (FC-IC1720Q) /CSM/FC-IC/FC-IC1720Q.Seq.d/                   192   3e-48
FC-IC1523 (FC-IC1523Q) /CSM/FC-IC/FC-IC1523Q.Seq.d/                   192   3e-48
FC-IC1519 (FC-IC1519Q) /CSM/FC-IC/FC-IC1519Q.Seq.d/                   192   3e-48

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AB088483|AB088483.1 Dictyostelium discoideum gene for gamete and mating-type specific protein A, complete cds.   192   1e-82  3
AK098314|AK098314.1 Homo sapiens cDNA FLJ40995 fis, clone UTERU2015830.    36   0.082  3
CD647609|CD647609.1 AUF_108_H04_T7 Crassostrea virginica Gonad Crassostrea virginica cDNA 5' similar to snRNP polypeptide B, mRNA sequence.    38   3.8    2
BX478652|BX478652.1 Homo sapiens mRNA; EST DKFZp686H07205_r1  (from clone  DKFZp686H07205).    36   5.8    2
CD451153|CD451153.1 USDA-FP_103216 Adult Alate Brown Citrus Aphid Toxoptera citricida cDNA clone WHWTC-42_H04 5', mRNA sequence.    42   6.2    1
U28755|U28755.1 Entamoeba invadens cysteine proteinase gene, partial cds.    42   6.2    1
BQ474168|BQ474168.1 biphyllus4e07.b Biphyllus lunatus cDNA Biphyllus lunatus cDNA clone biphyllus4e07 5', mRNA sequence.    42   6.2    1
BH165563|BH165563.1 ENTSB84TR Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    42   6.2    1
AQ408713|AQ408713.1 HS_5102_B2_G12_T7A RPCI-11 Human Male BAC Library Homo sapiens genomic clone Plate=678 Col=24 Row=N, genomic survey sequence.    42   6.2    1
BQ474510|BQ474510.1 biphyllus4e07.g Biphyllus lunatus cDNA Biphyllus lunatus cDNA clone biphyllus4e07 3', mRNA sequence.    42   6.2    1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB088483_1(AB088483|pid:none) Dictyostelium discoideum gmsA gene...    75   9e-13
AY720896_1(AY720896|pid:none) Cynodon dactylon Cyn d 24 mRNA, pa...    37   0.16
AP003536_22(AP003536|pid:none) Oryza sativa Japonica Group genom...    35   0.61
AC116979_83(AC116979|pid:none) Dictyostelium discoideum chromoso...    35   0.61
AX497240_1(AX497240|pid:none) Sequence 7 from Patent WO0229058.        35   0.61
AB081845_1(AB081845|pid:none) Engraulis japonicus aCatL mRNA for...    35   0.80
AY220615_1(AY220615|pid:none) Hydra vulgaris cathepsin L precurs...    35   0.80
EU915299_1(EU915299|pid:none) Ictalurus punctatus cathepsin L mR...    35   1.0
(P09648) RecName: Full=Cathepsin L1;          EC=3.4.22.15; Cont...    35   1.0
Y15901_2(Y15901|pid:none) Xenopus laevis mRNA for beta-type phos...    35   1.0

 psg: 0.55  gvh: 0.34  alm: 0.55  top: 0.53  tms: 0.00  mit: 0.22  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 36.0 %: nuclear
	 28.0 %: cytoplasmic
	 20.0 %: mitochondrial
	  8.0 %: cytoskeletal
	  4.0 %: vacuolar
	  4.0 %: vesicles of secretory system

>> prediction for FC-IC0102 is nuc

>FC-IC0102F.Seq
ACTTCATATGGTTGCGCAAAGACAATATGTCCAGATAAATCTGAAGTTTCATGTTCATAT
TACCCAGCAGGTGGATTTAAGGGTGTTCTTCCTTATACTCCAAAAACAACAACCCCAGCT
CCAACTACACCAGCTCCAACCACACCAAAACCAACCACACCAGCTCCAACTACTCCAAAA
CCAACAACACCAGCTCCAACCACCCCAAAACCAACAACACCAGCTCCAACCACTCCAAAA
CCAACCACACCAGCTCCAACTACTCCAAAACCAACAACACCAGCCCCAACAACACCAGCC
CCAACATCAACTCTTACAGTAGATNGGACTTCATACCAAACTCCAATANNAGATCNAGGA
CAATGCGGATCATGTTGGGCATNTNGCTAGTAGCTGCAGACACTTNAATCTCGTNACCTT
TATTAAATATGNGT----------