>FC-IC0030 (FC-IC0030Q) /CSM/FC-IC/FC-IC0030Q.Seq.d/
ACCACCTGATAATACAACATTACCATATAAATCTTTACGAATAGCGACAGCACATTTCAT
GATTGAATTGTATGTGGTTTCGTGAATACCAGCTGATTCCATACCTAAGAATGATGGTTG
GAAGAGAGCTTCTGGACAACGGAAACGTTCATTACCAAGGGTGATAACTTGACCATCTGG
TAATTCATATGATTTCTCTAATGCTGATGATGAGGCAGCAGTTTGCATTTCAGCTTCAAA
GTCGAGGGCGACGTATGCTAATTTTTCTTTGATATCTCTGACAATTTCTCTTTCGGCGGT
GGTGGTGAATGAGTAACCACGTTCAGTTAAGATTTTCATCATGTAATCAGTAAGATCACG
ACCTGCTATATCTATACGTAAGATGGCATGTGGTAAAGCATAACCGTCATTGATTGGTXX
XXXXXXXX

ppdnttlpykslriatahfmielyvvs*ipadsipkndgwkrasgqrkrslprvit*PSG
NSYDFSNADDEAAVCISASKSRATYANFSLISLTISLSAVVVNE*prsvkifim*svrsr
paisirkmacgka*psli---

Frame A:
tt**yniti*iftnsdstfhd*ivcgfvnts*fht*e*wleesfwttetfitkgdnltiw
*fi*fl*c***gsslhfsfkvegdvc*fffdisdnfsfgggge*vttfs*dfhhviskit
tcyiyt*dgmw*sitvidw---


Frame B:
ppdnttlpykslriatahfmielyvvs*ipadsipkndgwkrasgqrkrslprvit*PSG
NSYDFSNADDEAAVCISASKSRATYANFSLISLTISLSAVVVNE*prsvkifim*svrsr
paisirkmacgka*psli---


Frame C:
hliiqhyhinlye*rqhis*lncmwfreyqlipylrmmvgrelldngnvhyqg**ldhlv
ihmislmlmmrqqfafqlqsrgrrmlifl*yl*qflfrrww*msnhvqlrfsscnq*dhd
llylyvrwhvvkhnrh*l---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

FC-IC0030 (FC-IC0030Q) /CSM/FC-IC/FC-IC0030Q.Seq.d/                   829   0.0
VFL865 (VFL865Q) /CSM/VF/VFL8-C/VFL865Q.Seq.d/                        765   0.0
FC-IC1710 (FC-IC1710Q) /CSM/FC-IC/FC-IC1710Q.Seq.d/                   765   0.0
FC-IC1495 (FC-IC1495Q) /CSM/FC-IC/FC-IC1495Q.Seq.d/                   765   0.0
FC-IC1480 (FC-IC1480Q) /CSM/FC-IC/FC-IC1480Q.Seq.d/                   765   0.0
FC-IC1478 (FC-IC1478Q) /CSM/FC-IC/FC-IC1478Q.Seq.d/                   765   0.0
FC-IC1253 (FC-IC1253Q) /CSM/FC-IC/FC-IC1253Q.Seq.d/                   763   0.0
VFK236 (VFK236Q) /CSM/VF/VFK2-B/VFK236Q.Seq.d/                        757   0.0
FC-IC1525 (FC-IC1525Q) /CSM/FC-IC/FC-IC1525Q.Seq.d/                   757   0.0
FC-IC0256 (FC-IC0256Q) /CSM/FC-IC/FC-IC0256Q.Seq.d/                   757   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC116956|AC116956.2 Dictyostelium discoideum chromosome 2 map 1418423-1684967 strain AX4, complete sequence.   765   0.0    4
AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 map 2234041-2567370 strain AX4, complete sequence.   599   0.0    2
X03282|X03282.1 dictyostelium discoideum gene for actin A12.      749   0.0    1
AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 map 1005175-1418323 strain AX4, complete sequence.   591   e-165  1
M14146|M14146.1 D.discoideum actin 15 gene, complete cds.         575   e-160  1
AC115579|AC115579.2 Dictyostelium discoideum chromosome 2 map 4915084-5005461 strain AX4, complete sequence.   575   e-160  1
AC115577|AC115577.2 Dictyostelium discoideum chromosome 2 map 4657875-4914984 strain AX4, complete sequence.   567   e-158  5
X03281|X03281.1 Dictyostelium discoideum gene for actin A8.       559   e-155  1
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 map 1685067-2090751 strain AX4, complete sequence.   557   e-155  1
X03283|X03283.1 Dictyostelium discoideum gene for actin A3-S1.    448   e-122  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54H30) RecName: Full=Major actin; AltName: Full=Actin-1; AltNa...   265   4e-70
X03282_1(X03282|pid:none) dictyostelium discoideum gene for acti...   265   4e-70
B23412(B23412)actin 12 - slime mold (Dictyostelium discoideum)        265   4e-70
AF508263_1(AF508263|pid:none) Pyrocystis lunula actin mRNA, comp...   263   2e-69
AY615871_1(AY615871|pid:none) Phalansterium solitarium clone A a...   263   2e-69
(Q553U6) RecName: Full=Putative actin-22;  &AC116305_3(AC116305|...   262   2e-69
(P02576) RecName: Full=Actin, plasmodial isoform;  &ATFY(A29044;...   262   3e-69
EF455784_1(EF455784|pid:none) Hyperamoeba sp. ATCC PRA-39 actin ...   261   4e-69
AY294153_1(AY294153|pid:none) Platyamoeba placida actin mRNA, pa...   261   5e-69
ATDO(A93223;A92871;S67999;A03004)actin - slime mold (Dictyosteli...   261   7e-69

 psg: 0.75  gvh: 0.56  alm: 0.31  top: 0.53  tms: 0.07  mit: 0.19  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.34  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 1.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 24.0 %: cytoplasmic
	 20.0 %: endoplasmic reticulum
	 16.0 %: Golgi
	 16.0 %: mitochondrial
	 16.0 %: nuclear
	  4.0 %: plasma membrane
	  4.0 %: vesicles of secretory system

>> prediction for FC-IC0030 is cyt

>FC-IC0030F.Seq
ACCACCTGATAATACAACATTACCATATAAATCTTTACGAATAGCGACAGCACATTTCAT
GATTGAATTGTATGTGGTTTCGTGAATACCAGCTGATTCCATACCTAAGAATGATGGTTG
GAAGAGAGCTTCTGGACAACGGAAACGTTCATTACCAAGGGTGATAACTTGACCATCTGG
TAATTCATATGATTTCTCTAATGCTGATGATGAGGCAGCAGTTTGCATTTCAGCTTCAAA
GTCGAGGGCGACGTATGCTAATTTTTCTTTGATATCTCTGACAATTTCTCTTTCGGCGGT
GGTGGTGAATGAGTAACCACGTTCAGTTAAGATTTTCATCATGTAATCAGTAAGATCACG
ACCTGCTATATCTATACGTAAGATGGCATGTGGTAAAGCATAACCGTCATTGATTGGT--
--------