>CHS483 (CHS483Q) /CSM/CH/CHS4-D/CHS483Q.Seq.d/
XXXXXXXXXXTCTCACCCGGAATACGATCTTCAAGTAAAGAAACGTATTATGAGAGCCAC
CGAAGTTGATACTTTAAATTCAATACCAATGATGTTCTCAACTTCAAATAGATTCGTTTA
TTATGTACCAGCAAAATCAAATGACGATCCAAGATGGGATGCAGTTATCGATAAACTTCA
AATGGTTGGTAGAGGCAATGGTGGCGCTGTTAGAGGTATCTATAAAGGTGTTATTGAGAC
CACTTTCTTTGGCAAAAGAGTTTATTTGGTTGGTACCTATTCACCATTCTATAGTCAACA
ACAAAGAAATAAAAGTCAACGTATACTTTTCAATGATTTTCCAAAGGAAGAATTTGATCC
AACCATCACAAATCCTTTAACAAGTACTATGCTATTTAGAACTGATAAAGATCTCTCATT
GGATATTACTTTGGCTGAAAAAGTTTTCTCTTGTAAAGACTTTTGTGAAAAACATAAAGT
ATCATGTTTAGAATCTGATATGATGTTATTAACTGATAGTACTATAGTTNTAANACAATT
GNAACAACATT

---HPEYDLQVKKRIMRATEVDTLNSIPMMFSTSNRFVYYVPAKSNDDPRWDAVIDKLQM
VGRGNGGAVRGIYKGVIETTFFGKRVYLVGTYSPFYSQQQRNKSQRILFNDFPKEEFDPT
ITNPLTSTMLFRTDKDLSLDITLAEKVFSCKDFCEKHKVSCLESDMMLLTDSTIVXXQLX
QH

Frame A:
---ltrntifk*rnvl*eppklil*iqyq*csqlqidsfimyqqnqmtiqdgmqlsinfk
wlveamvallevsikvllrplslakefiwlvpihhsivnnkeikvnvyfsmifqrknliq
psqil*qvlcylelikishwillwlkkfslvktfvknikyhv*nli*cy*livl*x*xnx
nni


Frame B:
---spgirsssketyyeshrs*yfkfntndvlnfk*irllctskik*rskmgcsyr*tsn
gw*rqwwrc*ryl*rcy*dhflwqkslfgwylftil*sttkk*kstytfq*fskgri*sn
hhksfnkyyai*n**rsligyyfg*ksfll*rll*kt*simfri*ydvin**yysxxtix
tt


Frame C:
---HPEYDLQVKKRIMRATEVDTLNSIPMMFSTSNRFVYYVPAKSNDDPRWDAVIDKLQM
VGRGNGGAVRGIYKGVIETTFFGKRVYLVGTYSPFYSQQQRNKSQRILFNDFPKEEFDPT
ITNPLTSTMLFRTDKDLSLDITLAEKVFSCKDFCEKHKVSCLESDMMLLTDSTIVXXQLX
QH

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHS483 (CHS483Q) /CSM/CH/CHS4-D/CHS483Q.Seq.d/                       1055   0.0
CHD312 (CHD312Q) /CSM/CH/CHD3-A/CHD312Q.Seq.d/                       1031   0.0
AFF364 (AFF364Q) /CSM/AF/AFF3-C/AFF364Q.Seq.d/                       1021   0.0
AFO831 (AFO831Q) /CSM/AF/AFO8-B/AFO831Q.Seq.d/                       1017   0.0
AFM267 (AFM267Q) /CSM/AF/AFM2-C/AFM267Q.Seq.d/                       1017   0.0
AHK215 (AHK215Q) /CSM/AH/AHK2-A/AHK215Q.Seq.d/                       1015   0.0
CFG834 (CFG834Q) /CSM/CF/CFG8-B/CFG834Q.Seq.d/                       1007   0.0
AFK872 (AFK872Q) /CSM/AF/AFK8-C/AFK872Q.Seq.d/                        995   0.0
SFI706 (SFI706Q) /CSM/SF/SFI7-A/SFI706Q.Seq.d/                        983   0.0
AHC412 (AHC412Q) /CSM/AH/AHC4-A/AHC412Q.Seq.d/                        983   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC162439|AC162439.2 Medicago truncatula clone mth2-175g14, WORKING DRAFT SEQUENCE, 17 unordered pieces.    44   0.093  2
DU034531|DU034531.1 16627 Tomato HindIII BAC Library Lycopersicon esculentum genomic clone LE_HBa0073C10 5, genomic survey sequence.    38   0.14   2
AI484136|AI484136.1 EST248943 tomato resistant, Cornell Lycopersicon esculentum cDNA clone cLER1C5, mRNA sequence.    38   0.15   2
BG128254|BG128254.1 EST473900 tomato shoot/meristem Lycopersicon esculentum cDNA clone cTOF19D15 5' sequence, mRNA sequence.    38   0.15   2
AI490786|AI490786.1 EST241494 tomato shoot, Cornell Lycopersicon esculentum cDNA clone cLEB3H9 similar to cinnamic acid 4-hydroxylase, mRNA sequence.    38   0.15   2
BG133859|BG133859.1 EST466751 tomato crown gall Lycopersicon esculentum cDNA clone cTOE14I10 5' sequence, mRNA sequence.    38   0.15   2
AI773934|AI773934.1 EST255034 tomato resistant, Cornell Lycopersicon esculentum cDNA clone cLER8N1, mRNA sequence.    38   0.15   2
AC123464|AC123464.4 Rattus norvegicus clone CH230-17P22, WORKING DRAFT SEQUENCE, 1 ordered piece.    46   0.77   1
BX323843|BX323843.9 Zebrafish DNA sequence from clone CH211-10A23 in linkage group 19.    46   0.77   1
BG628815|BG628815.1 cC-esflcLEL23M01d1 Tomato flower library from a mixture of developmental stages Lycopersicon esculentum cDNA clone cC-esflcLEL23M01d1, mRNA sequence.    34   2.1    2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AP009552_2822(AP009552|pid:none) Microcystis aeruginosa NIES-843...    36   0.74
Y17877_1(Y17877|pid:none) Sycon raphanus mRNA for insulin recept...    36   0.74
AM778955_37(AM778955|pid:none) Microcystis aeruginosa PCC 7806 g...    36   0.74
AE009439_1402(AE009439|pid:none) Methanopyrus kandleri AV19, com...    35   0.96
BT011349_1(BT011349|pid:none) Drosophila melanogaster RH02355 fu...    35   0.96
AY069808_1(AY069808|pid:none) Drosophila melanogaster SD04942 fu...    35   0.96
AE014297_4620(AE014297|pid:none) Drosophila melanogaster chromos...    35   0.96
AC009322_3(AC009322|pid:none) Arabidopsis thaliana chromosome I ...    34   2.1
CP001344_1034(CP001344|pid:none) Cyanothece sp. PCC 7425, comple...    33   3.7
AX814538_1(AX814538|pid:none) Sequence 19 from Patent WO03064471.      33   3.7

 psg: 0.57  gvh: 0.38  alm: 0.45  top: 0.53  tms: 0.00  mit: 0.15  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 36.0 %: cytoplasmic
	 36.0 %: nuclear
	 20.0 %: mitochondrial
	  4.0 %: vacuolar
	  4.0 %: vesicles of secretory system

>> prediction for CHS483 is cyt

>CHS483Z.Seq
NNNNNNNNNNTCTCACCCGGAATACGATCTTCAAGTAAAGAAACGTATTATGAGAGCCAC
CGAAGTTGATACTTTAAATTCAATACCAATGATGTTCTCAACTTCAAATAGATTCGTTTA
TTATGTACCAGCAAAATCAAATGACGATCCAAGATGGGATGCAGTTATCGATAAACTTCA
AATGGTTGGTAGAGGCAATGGTGGCGCTGTTAGAGGTATCTATAAAGGTGTTATTGAGAC
CACTTTCTTTGGCAAAAGAGTTTATTTGGTTGGTACCTATTCACCATTCTATAGTCAACA
ACAAAGAAATAAAAGTCAACGTATACTTTTCAATGATTTTCCAAAGGAAGAATTTGATCC
AACCATCACAAATCCTTTAACAAGTACTATGCTATTTAGAACTGATAAAGATCTCTCATT
GGATATTACTTTGGCTGAAAAAGTTTTCTCTTGTAAAGACTTTTGTGAAAAACATAAAGT
ATCATGTTTAGAATCTGATATGATGTTATTAACTGATAGTACTATAGTTNTAANACAATT
GNAACAACATT