>CHS444 (CHS444Q) /CSM/CH/CHS4-B/CHS444Q.Seq.d/
TATTAAAAAATTTTAATTATTGTATATAATATTTTTAAATATATATATTAATATATATTA
ATATATTAATATTAATAAAATGAAAATATTATATTCATTATTATTAATATCAAGTATAAT
TTTAAATACTGTATTAAATATTTCATCACAAGTATATGATCAACGTATTTTGGCATTAAA
AGGAAAATGTTATTTAGATTCAAATAAAAATGCATTGTATGATGAAGGTGAACCAGGATT
TGGAAATGTTGAAATTTCTTTAGGAAATGCAACTGATTATAAGGGAAATAAATATCCAAT
ACGTTATTCATCTGCTGATGGTACATTTATATATGATGGATTAACTCAACGTACAACTTA
TGAATTTACATTTACCAATCCAAAAGATTATTXXXXXXXXXXGACTATACCAATGCTTTT
GGTGCAACTAAAGGTGGTCGTGATATTATTGTTACAACTGGTTTCGATTACTATGAAGCA
TTTGAAGGTTCAATTCGTTGGTATAATGCAACCTCTGGTAAACAACTAAAAGGTTACTCT
TTATATATAACCTCTTCAAATGGTCGTACCCCATCTCCAACCTTTGGTAAACAAAATGGT
CTTGGTGATATTACTTCAGTGTATGATTCTTCTCTTCCACAATATCGTGTTGGTAGAGTT
TGGCTTGATATAAATGGTAATGGTATTCAAGATGCTGGTGAACCTGGTATTTCAGGAATC
ACAGTATTCTTAATCTATGGTCAACAATCAACTCCAACAAGTCAAACTGTATCCGATTCA
AATGGTTATTTCAAATTTGAAGTTGATTTCAGTTCAAATTATTATTGTGTAATTCCTGTT
GCATTCTTCCAAGCTGGTTCTTCCATTACAATGAGAAATGCTGATCCAACTCATCCAAAT
ACAAATAGTGATGCTTTCTTATCAACTGTTGATAATGTTTATGTCACTTCTTTTACTTCT
TCTGATGCTGGTGGTTATTATTTTAATGGTTGTTCATTTGGTATTATTCCAAAAAAATAA
AATAATAAAAAAATATAAATAAATAAAAAAATAAAAAAATAAATAAAAAAATAAATAAAA
ATATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAAATATTANAANAA

ikkf*llyiiflniyiniy*YININKMKILYSLLLISSIILNTVLNISSQVYDQRILALK
GKCYLDSNKNALYDEGEPGFGNVEISLGNATDYKGNKYPIRYSSADGTFIYDGLTQRTTY
EFTFTNPKDY---

---DYTNAFGATKGGRDIIVTTGFDYYEAFEGSIRWYNATSGKQLKGYSLYITSSNGRTP
SPTFGKQNGLGDITSVYDSSLPQYRVGRVWLDINGNGIQDAGEPGISGITVFLIYGQQST
PTSQTVSDSNGYFKFEVDFSSNYYCVIPVAFFQAGSSITMRNADPTHPNTNSDAFLSTVD
NVYVTSFTSSDAGGYYFNGCSFGIIPKK*nnkki*inkkikk*ikk*iki*ink*ink*i
nk*ikilxx

Frame A:
y*kiliivynifkyiy*yiliy*y**neniifiiinikynfkycikyfitsi*styfgik
rkmlfrfk*kciv**r*triwkc*nffrkcn*l*gk*isntlfic*wyiyi*winstynl
*iyiyqskrl---

---DYTNAFGATKGGRDIIVTTGFDYYEAFEGSIRWYNATSGKQLKGYSLYITSSNGRTP
SPTFGKQNGLGDITSVYDSSLPQYRVGRVWLDINGNGIQDAGEPGISGITVFLIYGQQST
PTSQTVSDSNGYFKFEVDFSSNYYCVIPVAFFQAGSSITMRNADPTHPNTNSDAFLSTVD
NVYVTSFTSSDAGGYYFNGCSFGIIPKK*nnkki*inkkikk*ikk*iki*ink*ink*i
nk*ikilxx

Frame B:
ikkf*llyiiflniyiniy*YININKMKILYSLLLISSIILNTVLNISSQVYDQRILALK
GKCYLDSNKNALYDEGEPGFGNVEISLGNATDYKGNKYPIRYSSADGTFIYDGLTQRTTY
EFTFTNPKDY---

---tipmllvqlkvvvilllqlvsitmkhlkvqfvgimqplvnn*kvtlyi*plqmvvph
lqplvnkmvlvillqcmillfhnivlvefgli*mvmvfkmlvnlvfqesqys*smvnnql
qqvklypiqmvisnlklisvqiiiv*fllhssklvlplq*emliqliqiqivmlsyqlli
mfmsllllllmlvviilmvvhlvlfqknkiikkyk*ikk*knk*knk*kyk*ink*ink*
ink*kyxx

Frame C:
lknfnyci*yf*iyiliyinililik*kyyihyy*yqv*f*ily*ifhhkyminvfwh*k
envi*iqikmhcmmkvnqdlemlkfl*emqliireiniqyvihllmvhlymmd*lnvqlm
nlhlpiqkii---

---lyqcfwcn*rws*yycynwfrll*si*rfnslv*cnlw*ttkrllfiynlfkwsypi
snlw*tkwsw*yyfsv*ffsstiscw*sla*ykw*wysrcw*twyfrnhsilnlwstins
nksncirfkwlfqi*s*fqfklllcnsccilpswffhynekc*snsskyk**cflinc**
clchffyff*cwwllf*wlfiwyyskkik**knink*knkkinkkinknink*ink*ink
*inknixx

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SHJ874 (SHJ874Q) /CSM/SH/SHJ8-D/SHJ874Q.Seq.d/                       1205   0.0
SSG727 (SSG727Q) /CSM/SS/SSG7-B/SSG727Q.Seq.d/                       1205   0.0
SLH868 (SLH868Q) /CSM/SL/SLH8-C/SLH868Q.Seq.d/                       1205   0.0
SHL883 (SHL883Q) /CSM/SH/SHL8-D/SHL883Q.Seq.d/                       1205   0.0
SHL852 (SHL852Q) /CSM/SH/SHL8-C/SHL852Q.Seq.d/                       1205   0.0
SHL833 (SHL833Q) /CSM/SH/SHL8-B/SHL833Q.Seq.d/                       1205   0.0
SHL807 (SHL807Q) /CSM/SH/SHL8-A/SHL807Q.Seq.d/                       1205   0.0
SHL804 (SHL804Q) /CSM/SH/SHL8-A/SHL804Q.Seq.d/                       1205   0.0
SHL785 (SHL785Q) /CSM/SH/SHL7-D/SHL785Q.Seq.d/                       1205   0.0
SHL727 (SHL727Q) /CSM/SH/SHL7-B/SHL727Q.Seq.d/                       1205   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

BQ022375|BQ022375.1 UI-1-BB1p-akh-h-10-0-UI.s1 NCI_CGAP_Pl6 Homo sapiens cDNA cloneUI-1-BB1p-akh-h-10-0-UI 3', mRNA sequence.    48   0.41   1
AC150654|AC150654.2 Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0094L06, complete sequence.    36   0.83   2
AC114012|AC114012.5 Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0079H11, complete sequence.    36   0.84   2
AC105770|AC105770.2 Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_D02, complete sequence.    36   0.85   2
CV912682|CV912682.1 PF007G3 sporangia, cleaving Phytophthora infestans cDNA, mRNA sequence.    46   1.6    1
AC099203|AC099203.4 Rattus norvegicus clone CH230-126K21, *** SEQUENCING IN PROGRESS ***, 13 unordered pieces.    46   1.6    1
AC099201|AC099201.6 Rattus norvegicus clone CH230-123L16, WORKING DRAFT SEQUENCE, 7 unordered pieces.    46   1.6    1
AC005213|AC005213.1 Homo sapiens chromosome 5, BAC clone 84E9 (LBNL H120), complete sequence.    46   1.6    1
AC005188|AC005188.1 Homo sapiens PAC clone RP1-17P5 from 5q31, complete sequence.    46   1.6    1
CR356222|CR356222.24 Zebrafish DNA sequence from clone DKEY-103J14 in linkage group 13.    38   5.9    5

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CP000909_404(CP000909|pid:none) Chloroflexus aurantiacus J-10-fl...    63   2e-08
CP000686_3542(CP000686|pid:none) Roseiflexus sp. RS-1, complete ...    61   6e-08
CP000910_1528(CP000910|pid:none) Renibacterium salmoninarum ATCC...    59   3e-07
CP001337_3037(CP001337|pid:none) Chloroflexus aggregans DSM 9485...    59   3e-07
(Q7A780) RecName: Full=Serine-aspartate repeat-containing protei...    53   2e-05
AM076203_1(AM076203|pid:none) Staphylococcus aureus partial sdrD...    53   2e-05
AM076200_1(AM076200|pid:none) Staphylococcus aureus partial sdrD...    53   2e-05
AM076196_1(AM076196|pid:none) Staphylococcus aureus partial sdrD...    53   2e-05
AM076198_1(AM076198|pid:none) Staphylococcus aureus partial sdrD...    53   2e-05
CP000703_575(CP000703|pid:none) Staphylococcus aureus subsp. aur...    53   2e-05

 psg: 0.95  gvh: 0.59  alm: 0.26  top: 0.40  tms: 0.07  mit: 0.31  mip: 0.07
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.56  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 1.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 24.0 %: endoplasmic reticulum
	 20.0 %: cytoplasmic
	 16.0 %: Golgi
	 16.0 %: mitochondrial
	 16.0 %: nuclear
	  4.0 %: plasma membrane
	  4.0 %: extracellular, including cell wall

>> prediction for CHS444 is end

>CHS444F.Seq
TATTAAAAAATTTTAATTATTGTATATAATATTTTTAAATATATATATTAATATATATTA
ATATATTAATATTAATAAAATGAAAATATTATATTCATTATTATTAATATCAAGTATAAT
TTTAAATACTGTATTAAATATTTCATCACAAGTATATGATCAACGTATTTTGGCATTAAA
AGGAAAATGTTATTTAGATTCAAATAAAAATGCATTGTATGATGAAGGTGAACCAGGATT
TGGAAATGTTGAAATTTCTTTAGGAAATGCAACTGATTATAAGGGAAATAAATATCCAAT
ACGTTATTCATCTGCTGATGGTACATTTATATATGATGGATTAACTCAACGTACAACTTA
TGAATTTACATTTACCAATCCAAAAGATTATTNNNNNNNNNN

>CHS444Z.Seq
NNNNNNNNNNGACTATACCAATGCTTTTGGTGCAACTAAAGGTGGTCGTGATATTATTGT
TACAACTGGTTTCGATTACTATGAAGCATTTGAAGGTTCAATTCGTTGGTATAATGCAAC
CTCTGGTAAACAACTAAAAGGTTACTCTTTATATATAACCTCTTCAAATGGTCGTACCCC
ATCTCCAACCTTTGGTAAACAAAATGGTCTTGGTGATATTACTTCAGTGTATGATTCTTC
TCTTCCACAATATCGTGTTGGTAGAGTTTGGCTTGATATAAATGGTAATGGTATTCAAGA
TGCTGGTGAACCTGGTATTTCAGGAATCACAGTATTCTTAATCTATGGTCAACAATCAAC
TCCAACAAGTCAAACTGTATCCGATTCAAATGGTTATTTCAAATTTGAAGTTGATTTCAG
TTCAAATTATTATTGTGTAATTCCTGTTGCATTCTTCCAAGCTGGTTCTTCCATTACAAT
GAGAAATGCTGATCCAACTCATCCAAATACAAATAGTGATGCTTTCTTATCAACTGTTGA
TAATGTTTATGTCACTTCTTTTACTTCTTCTGATGCTGGTGGTTATTATTTTAATGGTTG
TTCATTTGGTATTATTCCAAAAAAATAAAATAATAAAAAAATATAAATAAATAAAAAAAT
AAAAAAATAAATAAAAAAATAAATAAAAATATAAATAAATAAATAAATAAATAAATAAAT
AAATAAATAAATAAAAATATTANAANAA

>CHS444P.Seq
TATTAAAAAATTTTAATTATTGTATATAATATTTTTAAATATATATATTAATATATATTA
ATATATTAATATTAATAAAATGAAAATATTATATTCATTATTATTAATATCAAGTATAAT
TTTAAATACTGTATTAAATATTTCATCACAAGTATATGATCAACGTATTTTGGCATTAAA
AGGAAAATGTTATTTAGATTCAAATAAAAATGCATTGTATGATGAAGGTGAACCAGGATT
TGGAAATGTTGAAATTTCTTTAGGAAATGCAACTGATTATAAGGGAAATAAATATCCAAT
ACGTTATTCATCTGCTGATGGTACATTTATATATGATGGATTAACTCAACGTACAACTTA
TGAATTTACATTTACCAATCCAAAAGATTATT----------GACTATACCAATGCTTTT
GGTGCAACTAAAGGTGGTCGTGATATTATTGTTACAACTGGTTTCGATTACTATGAAGCA
TTTGAAGGTTCAATTCGTTGGTATAATGCAACCTCTGGTAAACAACTAAAAGGTTACTCT
TTATATATAACCTCTTCAAATGGTCGTACCCCATCTCCAACCTTTGGTAAACAAAATGGT
CTTGGTGATATTACTTCAGTGTATGATTCTTCTCTTCCACAATATCGTGTTGGTAGAGTT
TGGCTTGATATAAATGGTAATGGTATTCAAGATGCTGGTGAACCTGGTATTTCAGGAATC
ACAGTATTCTTAATCTATGGTCAACAATCAACTCCAACAAGTCAAACTGTATCCGATTCA
AATGGTTATTTCAAATTTGAAGTTGATTTCAGTTCAAATTATTATTGTGTAATTCCTGTT
GCATTCTTCCAAGCTGGTTCTTCCATTACAATGAGAAATGCTGATCCAACTCATCCAAAT
ACAAATAGTGATGCTTTCTTATCAACTGTTGATAATGTTTATGTCACTTCTTTTACTTCT
TCTGATGCTGGTGGTTATTATTTTAATGGTTGTTCATTTGGTATTATTCCAAAAAAATAA
AATAATAAAAAAATATAAATAAATAAAAAAATAAAAAAATAAATAAAAAAATAAATAAAA
ATATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAAATATTANAANAA