>CHS404 (CHS404Q) /CSM/CH/CHS4-A/CHS404Q.Seq.d/
XXXXXXXXXXCACCAAAGGTGTTCAATATTTGAATGAAATTAAAGATTCTTTCGTTGGTG
CTTTCCAATGGGCCACCAAAGAAGGTGTTGTTTGTGATGAAAACATGAGAGGTATCCGCT
TCAATCTTTATGATGTCACCCTCCACACTGATGCCATCCACAGAGGTGGTGGTCAAATCA
TCCCAACTGCTCGTCGTGTACTCTATGCTGCTGAATTAACTGCCTCCCCAACTNTNTTAG
AACCAATNTACTTAGTAGAAATTACTGCCCCAGAAAACGCTATTGGTGGTATTTACTCTG
TACTCAATCGTCGTAGAGGTATTGTTATTGGTGAAGAACGTCGTATCGGTTCCCCATTAT
TCTCTGTCAAAGCTCATTTACCAGTATTAGAATCCTTCGGTTTCACCGCTGATTTACGTT
CCCACACTGCCGGTCAAGCTTTCCCACAATGTGTCTTCGATCATTGGGCTTCAATTGGTG
TTGTCAACAAAGATAAGAAAGCCACTGAAGTCGCTTTAGCCACCAGAAAGAGAAAAGGTT
TAGCCCCAGAAATCCCATAT

---TKGVQYLNEIKDSFVGAFQWATKEGVVCDENMRGIRFNLYDVTLHTDAIHRGGGQII
PTARRVLYAAELTASPTXLEPXYLVEITAPENAIGGIYSVLNRRRGIVIGEERRIGSPLF
SVKAHLPVLESFGFTADLRSHTAGQAFPQCVFDHWASIGVVNKDKKATEVALATRKRKGL
APEIPY

Frame A:
---TKGVQYLNEIKDSFVGAFQWATKEGVVCDENMRGIRFNLYDVTLHTDAIHRGGGQII
PTARRVLYAAELTASPTXLEPXYLVEITAPENAIGGIYSVLNRRRGIVIGEERRIGSPLF
SVKAHLPVLESFGFTADLRSHTAGQAFPQCVFDHWASIGVVNKDKKATEVALATRKRKGL
APEIPY


Frame B:
---pkvfni*mklkilslvlsngppkkvlfvmkt*evsasifmmspstlmpstevvvkss
qllvvysmlln*lppqlx*nqxt**kllpqktllvvftlysivvevlllvknvvsvphys
lskliyqy*npsvspliyvptlpvklshnvssiiglqlvlstkirkplksl*pperekv*
pqksh


Frame C:
---qrcsife*n*rffrwcfpmghqrrccl**kheryplqsl*chpph*chpqrwwsnhp
ncssctlcc*inclpnxxrtnxlsrnycprkrywwyllctqss*rycyw*rtsyrfpiil
cqssftsirilrfhr*ftfphcrssfptmclrslgfnwccqqr*esh*srfshqkekrfs
prnpi

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHS404 (CHS404Q) /CSM/CH/CHS4-A/CHS404Q.Seq.d/                       1072   0.0
VHO118 (VHO118Q) /CSM/VH/VHO1-A/VHO118Q.Seq.d/                       1066   0.0
VHD243 (VHD243Q) /CSM/VH/VHD2-B/VHD243Q.Seq.d/                       1066   0.0
VHA835 (VHA835Q) /CSM/VH/VHA8-B/VHA835Q.Seq.d/                       1066   0.0
VHG874 (VHG874Q) /CSM/VH/VHG8-D/VHG874Q.Seq.d/                       1059   0.0
VHQ491 (VHQ491Q) /CSM/VH/VHQ4-D/VHQ491Q.Seq.d/                       1059   0.0
VHQ483 (VHQ483Q) /CSM/VH/VHQ4-D/VHQ483Q.Seq.d/                       1059   0.0
VHQ476 (VHQ476Q) /CSM/VH/VHQ4-D/VHQ476Q.Seq.d/                       1059   0.0
VHQ473 (VHQ473Q) /CSM/VH/VHQ4-D/VHQ473Q.Seq.d/                       1059   0.0
VHQ463 (VHQ463Q) /CSM/VH/VHQ4-C/VHQ463Q.Seq.d/                       1059   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

M26017|M26017.1 D.discoideum elongation factor 2 mRNA, complete cds.  1019   0.0    1
AR550596|AR550596.1 Sequence 5727 from patent US 6747137.          78   2e-41  5
AF107286|AF107286.1 Candida albicans elongation factor 2 (EFT2) gene, partial cds.    78   4e-40  5
Y09664|Y09664.1 C.albicans EFT2 gene.                              78   1e-39  5
AY497659|AY497659.1 Candida dubliniensis strain CBS 7987 translation elongation factor gene, partial cds.    78   5e-37  4
AF107289|AF107289.1 Candida tropicalis elongation factor 2 (EFT2) gene, partial cds.    70   2e-35  5
CZ289188|CZ289188.1 cp62f05.f Candida parapsilosis Random Genomic Library Candida parapsilosis genomic clone cp62f05, genomic survey sequence.    72   3e-35  5
CZ282959|CZ282959.1 cp27c04.f Candida parapsilosis Random Genomic Library Candida parapsilosis genomic clone cp27c04, genomic survey sequence.    72   6e-35  5
BI502325|BI502325.1 kt88b08.y1 Strongyloides ratti L2 pAMP1 v1 Chiapelli McCarter Strongyloides ratti cDNA 5' similar to SW:EF2_CAEEL P29691 ELONGATION FACTOR 2 ;, mRNA sequence.    86   1e-33  3
CZ542080|CZ542080.1 SRAA-aad42a06.b1 Strongyloides ratti whole genome shotgun library (SRAAGSS 004) Strongyloides ratti genomic, genomic survey sequence.    86   2e-33  3

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY391422_1(AY391422|pid:none) Danio rerio eukaryotic translation...   239   3e-62
DQ848932_1(DQ848932|pid:none) Scophthalmus maximus clone kbc101 ...   239   5e-62
AY069933_1(AY069933|pid:none) Rana sylvatica eukaryotic translat...   238   8e-62
A40411(A40411) translation elongation factor eEF-2 - Caenorhabdi...   238   1e-61
BT071866_1(BT071866|pid:none) Salmo salar clone ssal-rgf-501-088...   236   2e-61
BT059038_1(BT059038|pid:none) Salmo salar clone ssal-rgf-521-328...   236   2e-61
BT045031_1(BT045031|pid:none) Salmo salar clone ssal-rgf-510-120...   236   4e-61
BT072304_1(BT072304|pid:none) Salmo salar clone ssal-rgf-520-280...   235   5e-61
BC060707_1(BC060707|pid:none) Mus musculus eukaryotic translatio...   235   7e-61
AK161993_1(AK161993|pid:none) Mus musculus 12 days embryo male w...   235   7e-61

 psg: 0.75  gvh: 0.42  alm: 0.46  top: 0.53  tms: 0.00  mit: 0.17  mip: 0.00
 nuc: 0.04  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: cytoplasmic
	 28.0 %: nuclear
	  8.0 %: cytoskeletal
	  8.0 %: mitochondrial
	  4.0 %: vacuolar
	  4.0 %: endoplasmic reticulum

>> prediction for CHS404 is cyt

>CHS404Z.Seq
NNNNNNNNNNCACCAAAGGTGTTCAATATTTGAATGAAATTAAAGATTCTTTCGTTGGTG
CTTTCCAATGGGCCACCAAAGAAGGTGTTGTTTGTGATGAAAACATGAGAGGTATCCGCT
TCAATCTTTATGATGTCACCCTCCACACTGATGCCATCCACAGAGGTGGTGGTCAAATCA
TCCCAACTGCTCGTCGTGTACTCTATGCTGCTGAATTAACTGCCTCCCCAACTNTNTTAG
AACCAATNTACTTAGTAGAAATTACTGCCCCAGAAAACGCTATTGGTGGTATTTACTCTG
TACTCAATCGTCGTAGAGGTATTGTTATTGGTGAAGAACGTCGTATCGGTTCCCCATTAT
TCTCTGTCAAAGCTCATTTACCAGTATTAGAATCCTTCGGTTTCACCGCTGATTTACGTT
CCCACACTGCCGGTCAAGCTTTCCCACAATGTGTCTTCGATCATTGGGCTTCAATTGGTG
TTGTCAACAAAGATAAGAAAGCCACTGAAGTCGCTTTAGCCACCAGAAAGAGAAAAGGTT
TAGCCCCAGAAATCCCATAT