>CHS268 (CHS268Q) /CSM/CH/CHS2-C/CHS268Q.Seq.d/
ATCCCAATATAATCCATTAATATTAAATTAATTTCATTTTATTGCATGTAATATAATAAT
AAATAAAATAAAATAAAATAAAATAAAATAAAATAAAAATTTAAATAAAAAATAAAAAGA
ATAAAGAAAAATAAAACTCACAACACACAAATATTAAAAAAAACTATACTTATAAAAAAA
AATAAAAAATAAAAAATAAAAAAATAACCCACACACTCGAACTAATAATAAACAATAAAC
AAACACACACACACATACATACACACACCAATAAACTAAATATATAGTAATAATAATAAT
AATAAATGGATCAATTAATCCCAGTTATTAATAAACTTCAAGATGTATTTAATACATTAG
GATCAGACCCATTGGATTTACCACAAATCGTTGTTGTTGGTAGTCAATCTTCAGGTAAAA
GTAGTGTACTTGAAAATATAGTAGGTCGTGATTTTTTACCAAGAGGTTCTGGTATTGTAA
CAAGAAGACCTTTGATTTTACAATTAACTCATTTACCAATTGCTGATGATGGATCACAAA
CTCAAGAATGGGGTGAATTTTTACATAAACCAAATGATATGTTTTATGATTTCTCAGAXX
XXXXXXXXTCTTTTTTCAGAGCTTCACCTGATCCATCTTTAGGTCAATATGGTGGTGCTA
ATAATAGTAATAATTCAAATAATCCAACATCACCAATTAATTCAAGTAGTAATAGCGGTA
ATAATTATAATACTTTTGGTGGTCAACAATCATCATCTTCATCATCACAACAATTACAAC
AATCATCACAATCACAATATAAAACTAGTTATAATAATAATAATAATAGTAGCAGCAATA
ATAGTAGTTATAATCGTTATCAAGATGATTTCTATGGTAGAGGTGATAAATTAAATCAAG
TACCATCAATTATTAAAGCACCAGATGATTTAACAAGTAAAGAGAAATTTGAAACTGAAT
TAATTCGTGAACTTTTAATTTCCTATTTTAATATCGTTAAAAAGAATGTTAAGGATTCAG
TTCCAAAATCAATTATGCATTTCTTGGTCAATCAATCAAAAGAACACATTCAAAATGAAT
TGGTTGCAGCCCTCTACAAAGAGGAATTGTTTGATGAATTATTAGAGGAATCACCACAAA
TCTCTAGTAAGAGAAAATCTTGTAAAGCTATGATCGAANTTTTAAGAAAAGCAAATNAAA
ATATTAATGAAATTAGAGATTTTAGAAATTAAATATACATTTNAATAAAATTNTTATTAC
ATTTATAA

pniih*y*infillhvi***ik*nkik*nkiki*iknkknkek*nsqhtnikknytykkk
*kiknkkithtleliinnkqththihthtnklni*******MDQLIPVINKLQDVFNTLG
SDPLDLPQIVVVGSQSSGKSSVLENIVGRDFLPRGSGIVTRRPLILQLTHLPIADDGSQT
QEWGEFLHKPNDMFYDFS---

---SFFRASPDPSLGQYGGANNSNNSNNPTSPINSSSNSGNNYNTFGGQQSSSSSSQQLQ
QSSQSQYKTSYNNNNNSSSNNSSYNRYQDDFYGRGDKLNQVPSIIKAPDDLTSKEKFETE
LIRELLISYFNIVKKNVKDSVPKSIMHFLVNQSKEHIQNELVAALYKEELFDELLEESPQ
ISSKRKSCKAMIEXLRKANXNINEIRDFRN*iyixikxllhl*

Frame A:
ipi*siniklisfycm*ynnk*nkik*nkik*kfk*kikrikknkthntqilkktilikk
nkk*kikk*pthsn***tinkhthtyihtpin*iysnnnnnkwin*sqllinfkmylih*
dqthwiyhkslllvvnlqvkvvylki**vvifyqevlvl*qedl*fyn*liyqllmmdhk
lkngvnfyinqmicfmisq---

---SFFRASPDPSLGQYGGANNSNNSNNPTSPINSSSNSGNNYNTFGGQQSSSSSSQQLQ
QSSQSQYKTSYNNNNNSSSNNSSYNRYQDDFYGRGDKLNQVPSIIKAPDDLTSKEKFETE
LIRELLISYFNIVKKNVKDSVPKSIMHFLVNQSKEHIQNELVAALYKEELFDELLEESPQ
ISSKRKSCKAMIEXLRKANXNINEIRDFRN*iyixikxllhl*

Frame B:
sqynpliln*fhfiacniiinkik*nkik*nknlnkk*ke*rkikltthky*kklyl*kk
iknkk*knnphtrtnnkq*tnththtythq*tkyiviiiiingsinpsy**tsrci*yir
irpigfttnrccw*sifr*k*ct*kysrs*fftkrfwycnkktfdftinsftnc**witn
srmg*ift*tk*yvl*flr---

---lfselhlihl*vnmvvliiviiqiiqhhqliqvviaviiiillvvnnhhlhhhnnyn
nhhnhniklviiiiiivaaiivviivikmismvevin*ikyhqllkhqmi*qvkrnlkln
*fvnf*fpilislkrmlriqfqnqlciswsinqkntfkmnwlqpstkrnclmny*rnhhk
slvrenlvkl*sxf*ekqxkilmkleileikytfx*nxyyiy

Frame C:
pniih*y*infillhvi***ik*nkik*nkiki*iknkknkek*nsqhtnikknytykkk
*kiknkkithtleliinnkqththihthtnklni*******MDQLIPVINKLQDVFNTLG
SDPLDLPQIVVVGSQSSGKSSVLENIVGRDFLPRGSGIVTRRPLILQLTHLPIADDGSQT
QEWGEFLHKPNDMFYDFS---

---ffqsft*sifrsiwwc*****fk*snitn*fk***r**l*yfwwstiiifiittitt
iititi*n*l*******qq***l*slsr*flw*r**iksstiny*str*fnk*rei*n*i
ns*tfnflf*yr*kec*gfsskinyaflgqsikrthsk*igcsplqrgiv**iirgittn
l**ekil*sydrxfkkskxky**n*rf*klnihxnkixitfi

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHS268 (CHS268Q) /CSM/CH/CHS2-C/CHS268Q.Seq.d/                        912   0.0
AHF774 (AHF774Q) /CSM/AH/AHF7-D/AHF774Q.Seq.d/                        777   0.0
SSK388 (SSK388Q) /CSM/SS/SSK3-D/SSK388Q.Seq.d/                        767   0.0
CHQ604 (CHQ604Q) /CSM/CH/CHQ6-A/CHQ604Q.Seq.d/                        767   0.0
CHQ547 (CHQ547Q) /CSM/CH/CHQ5-B/CHQ547Q.Seq.d/                        767   0.0
CHG780 (CHG780Q) /CSM/CH/CHG7-D/CHG780Q.Seq.d/                        767   0.0
AHP868 (AHP868Q) /CSM/AH/AHP8-C/AHP868Q.Seq.d/                        767   0.0
AHM495 (AHM495Q) /CSM/AH/AHM4-D/AHM495Q.Seq.d/                        767   0.0
AHL814 (AHL814Q) /CSM/AH/AHL8-A/AHL814Q.Seq.d/                        767   0.0
AHL682 (AHL682Q) /CSM/AH/AHL6-D/AHL682Q.Seq.d/                        767   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

X99669|X99669.1 Dictyostelium discoideum mRNA for dynamin homologue.   743   0.0    4
CZ291729|CZ291729.1 cp77c12.r Candida parapsilosis Random Genomic Library Candida parapsilosis genomic clone cp77c12, genomic survey sequence.    84   9e-21  4
CZ287077|CZ287077.1 cp50e08.f Candida parapsilosis Random Genomic Library Candida parapsilosis genomic clone cp50e08, genomic survey sequence.    84   1e-20  4
CJ370309|CJ370309.1 Molgula tectiformis cDNA, gastrula/neurula clone:mtga013n07, 5' end.    52   5e-14  4
CJ367705|CJ367705.1 Molgula tectiformis cDNA, gastrula/neurula clone:mtga004e02, 5' end.    52   8e-14  4
CJ347247|CJ347247.1 Molgula tectiformis cDNA, cleaving embryo clone:mtcl005f07, 5' end.    44   2e-11  4
CJ416026|CJ416026.1 Molgula tectiformis cDNA, larva clone:mtlv023f08, 5' end.    44   3e-11  4
CO370716|CO370716.1 tah64b03.y1 Hydra EST UCI 5 Hydra magnipapillata cDNA 5' similar to SW:DYN2_MOUSE P39054 DYNAMIN 2 ;, mRNA sequence.    46   8e-06  2
AJ251163|AJ251163.1 Dictyostelium discoideum dymB gene for dynamin B homologue.    62   3e-05  1
AF153362|AF153362.1 Dictyostelium discoideum adenylyl cyclase (acrA) gene, complete cds.    36   1e-04  4

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q94464) RecName: Full=Dynamin-A;  &X99669_1(X99669|pid:none)         260   8e-68
BC044291_1(BC044291|pid:none) Xenopus laevis similar to dynamin ...   112   2e-23
AF061795_1(AF061795|pid:none) Homo sapiens dynamin-like protein ...   107   7e-22
BC107763_1(BC107763|pid:none) Homo sapiens dynamin 1-like, mRNA ...   107   7e-22
AK293290_1(AK293290|pid:none) Homo sapiens cDNA FLJ59840 complet...   107   7e-22
AK298568_1(AK298568|pid:none) Homo sapiens cDNA FLJ59948 complet...   107   7e-22
BC024590_1(BC024590|pid:none) Homo sapiens dynamin 1-like, mRNA ...   107   7e-22
BC046374_1(BC046374|pid:none) Xenopus laevis dynamin 1-like, mRN...   107   7e-22
AB169569_1(AB169569|pid:none) Macaca fascicularis brain cDNA, cl...   107   7e-22
AF000430_1(AF000430|pid:none) Homo sapiens dynamin-like protein ...   107   7e-22

 psg: 0.70  gvh: 0.43  alm: 0.47  top: 0.53  tms: 0.00  mit: 0.21  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: cytoplasmic
	 20.0 %: nuclear
	 16.0 %: mitochondrial
	 12.0 %: cytoskeletal
	  4.0 %: vacuolar

>> prediction for CHS268 is cyt

>CHS268F.Seq
ATCCCAATATAATCCATTAATATTAAATTAATTTCATTTTATTGCATGTAATATAATAAT
AAATAAAATAAAATAAAATAAAATAAAATAAAATAAAAATTTAAATAAAAAATAAAAAGA
ATAAAGAAAAATAAAACTCACAACACACAAATATTAAAAAAAACTATACTTATAAAAAAA
AATAAAAAATAAAAAATAAAAAAATAACCCACACACTCGAACTAATAATAAACAATAAAC
AAACACACACACACATACATACACACACCAATAAACTAAATATATAGTAATAATAATAAT
AATAAATGGATCAATTAATCCCAGTTATTAATAAACTTCAAGATGTATTTAATACATTAG
GATCAGACCCATTGGATTTACCACAAATCGTTGTTGTTGGTAGTCAATCTTCAGGTAAAA
GTAGTGTACTTGAAAATATAGTAGGTCGTGATTTTTTACCAAGAGGTTCTGGTATTGTAA
CAAGAAGACCTTTGATTTTACAATTAACTCATTTACCAATTGCTGATGATGGATCACAAA
CTCAAGAATGGGGTGAATTTTTACATAAACCAAATGATATGTTTTATGATTTCTCAGANN
NNNNNNNN

>CHS268Z.Seq
NNNNNNNNNNTCTTTTTTCAGAGCTTCACCTGATCCATCTTTAGGTCAATATGGTGGTGC
TAATAATAGTAATAATTCAAATAATCCAACATCACCAATTAATTCAAGTAGTAATAGCGG
TAATAATTATAATACTTTTGGTGGTCAACAATCATCATCTTCATCATCACAACAATTACA
ACAATCATCACAATCACAATATAAAACTAGTTATAATAATAATAATAATAGTAGCAGCAA
TAATAGTAGTTATAATCGTTATCAAGATGATTTCTATGGTAGAGGTGATAAATTAAATCA
AGTACCATCAATTATTAAAGCACCAGATGATTTAACAAGTAAAGAGAAATTTGAAACTGA
ATTAATTCGTGAACTTTTAATTTCCTATTTTAATATCGTTAAAAAGAATGTTAAGGATTC
AGTTCCAAAATCAATTATGCATTTCTTGGTCAATCAATCAAAAGAACACATTCAAAATGA
ATTGGTTGCAGCCCTCTACAAAGAGGAATTGTTTGATGAATTATTAGAGGAATCACCACA
AATCTCTAGTAAGAGAAAATCTTGTAAAGCTATGATCGAANTTTTAAGAAAAGCAAATNA
AAATATTAATGAAATTAGAGATTTTAGAAATTAAATATACATTTNAATAAAATTNTTATT
ACATTTATAA

>CHS268P.Seq
ATCCCAATATAATCCATTAATATTAAATTAATTTCATTTTATTGCATGTAATATAATAAT
AAATAAAATAAAATAAAATAAAATAAAATAAAATAAAAATTTAAATAAAAAATAAAAAGA
ATAAAGAAAAATAAAACTCACAACACACAAATATTAAAAAAAACTATACTTATAAAAAAA
AATAAAAAATAAAAAATAAAAAAATAACCCACACACTCGAACTAATAATAAACAATAAAC
AAACACACACACACATACATACACACACCAATAAACTAAATATATAGTAATAATAATAAT
AATAAATGGATCAATTAATCCCAGTTATTAATAAACTTCAAGATGTATTTAATACATTAG
GATCAGACCCATTGGATTTACCACAAATCGTTGTTGTTGGTAGTCAATCTTCAGGTAAAA
GTAGTGTACTTGAAAATATAGTAGGTCGTGATTTTTTACCAAGAGGTTCTGGTATTGTAA
CAAGAAGACCTTTGATTTTACAATTAACTCATTTACCAATTGCTGATGATGGATCACAAA
CTCAAGAATGGGGTGAATTTTTACATAAACCAAATGATATGTTTTATGATTTCTCAGA--
--------TCTTTTTTCAGAGCTTCACCTGATCCATCTTTAGGTCAATATGGTGGTGCTA
ATAATAGTAATAATTCAAATAATCCAACATCACCAATTAATTCAAGTAGTAATAGCGGTA
ATAATTATAATACTTTTGGTGGTCAACAATCATCATCTTCATCATCACAACAATTACAAC
AATCATCACAATCACAATATAAAACTAGTTATAATAATAATAATAATAGTAGCAGCAATA
ATAGTAGTTATAATCGTTATCAAGATGATTTCTATGGTAGAGGTGATAAATTAAATCAAG
TACCATCAATTATTAAAGCACCAGATGATTTAACAAGTAAAGAGAAATTTGAAACTGAAT
TAATTCGTGAACTTTTAATTTCCTATTTTAATATCGTTAAAAAGAATGTTAAGGATTCAG
TTCCAAAATCAATTATGCATTTCTTGGTCAATCAATCAAAAGAACACATTCAAAATGAAT
TGGTTGCAGCCCTCTACAAAGAGGAATTGTTTGATGAATTATTAGAGGAATCACCACAAA
TCTCTAGTAAGAGAAAATCTTGTAAAGCTATGATCGAANTTTTAAGAAAAGCAAATNAAA
ATATTAATGAAATTAGAGATTTTAGAAATTAAATATACATTTNAATAAAATTNTTATTAC
ATTTATAA