>CHS193 (CHS193Q) /CSM/CH/CHS1-D/CHS193Q.Seq.d/
XXXXXXXXXXAAATGTGTAGCTCAAGATTCTCATTGTGATGATGGTAATCCCATGTACTG
ATAATGCTTGTGTCGCTTCAGCTAATAGTACCGCCAATAGCCAAGTTGGTCAATGCACTC
AAACTCCAACTGCTAAATGTGATTTGGGTGATAAATGTATGGTTTACAGTTGTACCTTGG
AAGGTGGTTGTAATGCAACTCAACGTGTTTGTCCAAACTCTGGTGCTTGTAAAATTGGTT
ATTGTGAACCTGGTTTCGGTTGTAAATTAAAGGATAGAGTTTGTTCTTCCGATTGGTATT
GTATTGAAGCTCAATGTGATGCAAAATATGGTTGCATTCAATTCGATAGAAGATGTGCTC
CTGATAATAGTAAATGTCAAGAAGGTGTCTGTGTAAACAATACTGCTATCGGTAAAAATG
ATGGAAAATGTATTTCTGAAGATTATGATCCAAAACCATTTGTTTGTCAAAAAGCTGCTT
TAGTTTCAACTGCTGTTATTGCAAGTGTTGTTGTAGTTGGTGCTGTTGTTTTAGGTGCTG
CTATATTTGCGGGTAA

---nv*LKILIVMMVIPCTDNACVASANSTANSQVGQCTQTPTAKCDLGDKCMVYSCTLE
GGCNATQRVCPNSGACKIGYCEPGFGCKLKDRVCSSDWYCIEAQCDAKYGCIQFDRRCAP
DNSKCQEGVCVNNTAIGKNDGKCISEDYDPKPFVCQKAALVSTAVIASVVVVGAVVLGAA
IFAG

Frame A:
---nv*LKILIVMMVIPCTDNACVASANSTANSQVGQCTQTPTAKCDLGDKCMVYSCTLE
GGCNATQRVCPNSGACKIGYCEPGFGCKLKDRVCSSDWYCIEAQCDAKYGCIQFDRRCAP
DNSKCQEGVCVNNTAIGKNDGKCISEDYDPKPFVCQKAALVSTAVIASVVVVGAVVLGAA
IFAG


Frame B:
---mcssrfsl**w*shvlimlvslqlivppiaklvnalklqllnviwvinvwftvvpwk
vvvmqlnvfvqtlvlvklvivnlvsvvn*riefvlpigivlklnvmqnmvafnsiedvll
iivnvkkvsv*tillsvkmmenvflkimiqnhlfvkkll*fqllllqvll*lvllf*vll
ylrv


Frame C:
---cvaqdshcddgnpmy**clcrfs**yrq*pswsmhsnsnc*m*fg**myglqlylgr
wl*cnstclsklwcl*nwll*twfrl*ikg*slffrlvly*ssm*ckiwlhsir*kmcs*
***msrrclckqycyr*k*wkmyf*rl*skticlskscfsfnccyckcccswcccfrccy
icg*

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SFE223 (SFE223Q) /CSM/SF/SFE2-A/SFE223Q.Seq.d/                       1082   0.0
CHS193 (CHS193Q) /CSM/CH/CHS1-D/CHS193Q.Seq.d/                       1082   0.0
CHP865 (CHP865Q) /CSM/CH/CHP8-C/CHP865Q.Seq.d/                       1082   0.0
CHP822 (CHP822Q) /CSM/CH/CHP8-A/CHP822Q.Seq.d/                       1082   0.0
CHP160 (CHP160Q) /CSM/CH/CHP1-C/CHP160Q.Seq.d/                       1082   0.0
CHN587 (CHN587Q) /CSM/CH/CHN5-D/CHN587Q.Seq.d/                       1082   0.0
CHN512 (CHN512Q) /CSM/CH/CHN5-A/CHN512Q.Seq.d/                       1082   0.0
CHI393 (CHI393Q) /CSM/CH/CHI3-D/CHI393Q.Seq.d/                       1082   0.0
CFJ155 (CFJ155Q) /CSM/CF/CFJ1-C/CFJ155Q.Seq.d/                       1082   0.0
AHQ259 (AHQ259Q) /CSM/AH/AHQ2-C/AHQ259Q.Seq.d/                       1082   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 map 1685067-2090751 strain AX4, complete sequence.    66   8e-07  1
CX053834|CX053834.1 UCRCS09_8E08_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-8E08-I15-1-5.g, mRNA sequence.    50   0.049  1
CC946427|CC946427.1 BOIFV20TF BO_1.4_1.6_KB_nuc Brassica oleracea genomic clone BOIFV20, genomic survey sequence.    50   0.049  1
CC075688|CC075688.1 CSU-K33r.25G4.SP6 CSU-K33r Aedes aegypti genomic clone CSU-K33r.25G4, DNA sequence.    50   0.049  1
BH960705|BH960705.1 odd88f07.b1 B.oleracea002 Brassica oleracea genomic, DNA sequence.    50   0.049  1
AC115684|AC115684.2 Dictyostelium discoideum chromosome 2 map 3108975-3191114 strain AX4, complete sequence.    38   0.12   4
AR549621|AR549621.1 Sequence 4752 from patent US 6747137.          46   0.16   2
AL287678|AL287678.1 Tetraodon nigroviridis genome survey sequence T7 end of clone 105D19 of library G from Tetraodon nigroviridis.    38   0.50   2
AI357542|AI357542.1 qu20b04.x1 NCI_CGAP_Ov23 Homo sapiens cDNA clone IMAGE:1965295 3', mRNA sequence.    36   0.71   2
CQ467258|CQ467258.1 Sequence 10036 from Patent WO0192581.          36   0.71   2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54P69) RecName: Full=Protein psiM; Flags: Precursor;                318   2e-90
(Q86HT1) RecName: Full=Protein psiL; Flags: Precursor;  &AC11695...   143   3e-33
(Q557E9) RecName: Full=Protein psiG; Flags: Precursor;  &AC11568...   130   1e-30
(Q94494) RecName: Full=Protein psiH; Flags: Precursor;  &U67940_...   127   2e-28
(Q54VS2) RecName: Full=Protein psiP; Flags: Precursor;                118   1e-25
(Q54G85) RecName: Full=Protein psiJ; Flags: Precursor;                 99   6e-20
(Q54CH8) RecName: Full=Protein psiN; Flags: Precursor;                 87   3e-16
S44208(S44208) extracellular matrix protein B - Dictyostelium mi...    61   2e-08
AC117072_61(AC117072|pid:none) Dictyostelium discoideum chromoso...    59   1e-07
(P11976) RecName: Full=Prestalk protein; AltName: Full=Extracell...    56   5e-07

 psg: 1.00  gvh: 0.57  alm: 0.16  top: 0.33  tms: 0.13  mit: 0.27  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 1.00  m3b: 0.00  m_ : 0.00 

	 32.0 %: endoplasmic reticulum
	 24.0 %: mitochondrial
	 16.0 %: plasma membrane
	  8.0 %: extracellular, including cell wall
	  4.0 %: Golgi
	  4.0 %: vacuolar
	  4.0 %: nuclear
	  4.0 %: vesicles of secretory system
	  4.0 %: cytoplasmic

>> prediction for CHS193 is end

>CHS193Z.Seq
NNNNNNNNNNAAATGTGTAGCTCAAGATTCTCATTGTGATGATGGTAATCCCATGTACTG
ATAATGCTTGTGTCGCTTCAGCTAATAGTACCGCCAATAGCCAAGTTGGTCAATGCACTC
AAACTCCAACTGCTAAATGTGATTTGGGTGATAAATGTATGGTTTACAGTTGTACCTTGG
AAGGTGGTTGTAATGCAACTCAACGTGTTTGTCCAAACTCTGGTGCTTGTAAAATTGGTT
ATTGTGAACCTGGTTTCGGTTGTAAATTAAAGGATAGAGTTTGTTCTTCCGATTGGTATT
GTATTGAAGCTCAATGTGATGCAAAATATGGTTGCATTCAATTCGATAGAAGATGTGCTC
CTGATAATAGTAAATGTCAAGAAGGTGTCTGTGTAAACAATACTGCTATCGGTAAAAATG
ATGGAAAATGTATTTCTGAAGATTATGATCCAAAACCATTTGTTTGTCAAAAAGCTGCTT
TAGTTTCAACTGCTGTTATTGCAAGTGTTGTTGTAGTTGGTGCTGTTGTTTTAGGTGCTG
CTATATTTGCGGGTAA