CHS151
Library CH
(Link to library)
Clone ID CHS151
Atlas ID -
NBRP ID -
dictyBase ID -
Link to Contig Contig-U12673-1
Original site URL
Representative seq. ID
(Link to Original site)
Representative DNA sequence
>CHS151 (CHS151Q) /CSM/CH/CHS1-C/CHS151Q.Seq.d/
XXXXXXXXXXTGGTTTCACAGATCCAAAGAAAGCTGAAGATGTCTACTATGTCAATTGGT
TGATTATGGCACGTGCTGGTGTCTGTGCATTGGAATTTTATAGTCCACCAAGTGAAGGTG
CACCAGGTAAATGGAGACAAGCTCATATGCAAGCCAGATATTGTATTTTAACAACATTCT
TACGTTCTGGTATTGTCACTTTAGACAAGACTGCCGACGATGTAATTGTCAAACTTGATA
AAAGTAAAATTAGAGGTATTGGTGTTAAAGCTGTTGGTGATTTCCTCAATAGATTAATGG
TTTACAAAGCAACTGCAAATATTGATGCCTCAATCAAATTATTCGATGAATATACTCATG
TCAATGAAGAATTCCTCGCCATTAGAGATATAGTTTTGGCTAAAAAGAAACCAAGAAAGG
TATTTGTTCAAGCTCATACATATCTCAATTCAAATGGTAAAGTTTGTCTTCAAGATTTTG
ATGACTCAACTCAAGGTATGATCGATTCAATGATCACCAGATTTGGTAAAGATGATTCTG
ATATGTTATAAAGCTTTTTATTAAATTTCCAAAAAATAAAATAATATAAAATAAAATAAA
ATAAAATAAAATAAAATATAAAATAAAATAAAATATAAAATAAAATAAAATATAAAATAA
ATAAATATT
sequence update 2002. 9.10
Translated Amino Acid sequence
---GFTDPKKAEDVYYVNWLIMARAGVCALEFYSPPSEGAPGKWRQAHMQARYCILTTFL
RSGIVTLDKTADDVIVKLDKSKIRGIGVKAVGDFLNRLMVYKATANIDASIKLFDEYTHV
NEEFLAIRDIVLAKKKPRKVFVQAHTYLNSNGKVCLQDFDDSTQGMIDSMITRFGKDDSD
ML*sfllnfqkik*ykik*nkik*nik*nki*nkikykinky


Translated Amino Acid sequence (All Frames)
Frame A:
---GFTDPKKAEDVYYVNWLIMARAGVCALEFYSPPSEGAPGKWRQAHMQARYCILTTFL
RSGIVTLDKTADDVIVKLDKSKIRGIGVKAVGDFLNRLMVYKATANIDASIKLFDEYTHV
NEEFLAIRDIVLAKKKPRKVFVQAHTYLNSNGKVCLQDFDDSTQGMIDSMITRFGKDDSD
ML*sfllnfqkik*ykik*nkik*nik*nki*nkikykinky


Frame B:
---vsqiqrklkmstmsig*lwhvlvsvhwnfivhqvkvhqvngdklickpdivf*qhsy
vlvlsl*trlptm*lsnlikvklevlvlkllvissid*wftkqlqilmpqsnysmnilms
mknssplei*fwlkrnqerylfklihisiqmvkfvfkilmtqlkv*siq*spdlvkmili
cykafy*iskk*nnik*nkik*nki*nkikykik*nik*ini


Frame C:
---fhrskes*rcllcqlvdygtcwclcigil*stk*rctr*metssyasqilyfnnilt
fwychfrqdcrrcncqt**k*n*rywc*scw*fpq*inglqsncky*clnqiir*iyscq
*riprh*rysfg*ketkkgicsssyisqfkw*slssrf**lnsrydrfndhqiw*r*f*y
viklfikfpknkii*nkik*nkikykik*nik*nki*nk*i


Homology vs CSM-cDNA

Score E
Sequences producing significant alignments: (bits) Value

VHA874 (VHA874Q) /CSM/VH/VHA8-D/VHA874Q.Seq.d/ 1110 0.0
VHP234 (VHP234Q) /CSM/VH/VHP2-B/VHP234Q.Seq.d/ 1110 0.0
VHO760 (VHO760Q) /CSM/VH/VHO7-C/VHO760Q.Seq.d/ 1110 0.0
VHO670 (VHO670Q) /CSM/VH/VHO6-C/VHO670Q.Seq.d/ 1110 0.0
VHN272 (VHN272Q) /CSM/VH/VHN2-C/VHN272Q.Seq.d/ 1110 0.0
VHN114 (VHN114Q) /CSM/VH/VHN1-A/VHN114Q.Seq.d/ 1110 0.0
VHK861 (VHK861Q) /CSM/VH/VHK8-C/VHK861Q.Seq.d/ 1110 0.0
VHJ529 (VHJ529Q) /CSM/VH/VHJ5-B/VHJ529Q.Seq.d/ 1110 0.0
VHJ114 (VHJ114Q) /CSM/VH/VHJ1-A/VHJ114Q.Seq.d/ 1110 0.0
VHI866 (VHI866Q) /CSM/VH/VHI8-C/VHI866Q.Seq.d/ 1110 0.0

own update 2009. 4. 4
Homology vs DNA

Score E
Sequences producing significant alignments: (bits) Value N

AC116330|AC116330.2 Dictyostelium discoideum chromosome 2 map 3191214-3323468 strain AX4, complete sequence. 1110 0.0 1
BX571857|BX571857.1 Staphylococcus aureus strain MSSA476, complete genome. 46 0.92 1
BA000033|BA000033.2 Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2. 46 0.92 1
CG963837|CG963837.1 MBEJO94TFB mth2 Medicago truncatula genomic clone 69P19, genomic survey sequence. 36 2.2 2
AJ444666|AJ444666.1 Gallus gallus EST, clone library dkfz426, clone 42l3r1. 44 3.6 1
AJ732945|AJ732945.1 Gallus gallus EST, clone 5k17s2. 44 3.6 1
AJ393652|AJ393652.1 Gallus gallus EST clone 16f4r1. 44 3.6 1
AJ732942|AJ732942.1 Gallus gallus EST, clone 5k17r7. 44 3.6 1
CT027715|CT027715.2 Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH211-183F23. 44 3.6 1
AL450993|AL450993.11 Human DNA sequence *** SEQUENCING CANCELLED *** from clone RP11-212D5. 44 3.6 1
dna update 2005.11.27
Homology vs Protein

Score E
Sequences producing significant alignments: (bits) Value

(A7RZW4) RecName: Full=Dipeptidyl-peptidase 3; EC=3.4.1... 150 3e-35
X91067_8(X91067|pid:none) S.cerevisiae DNA from chromosome XV (c... 136 5e-31
(Q08225) RecName: Full=Probable dipeptidyl-peptidase 3; ... 136 5e-31
BC043905_1(BC043905|pid:none) Xenopus laevis dipeptidylpeptidase... 132 9e-30
AM494942_94(AM494942|pid:none) Leishmania braziliensis chromosom... 130 3e-29
BC075771_1(BC075771|pid:none) Danio rerio dipeptidylpeptidase 3,... 130 3e-29
BC077244_1(BC077244|pid:none) Xenopus laevis dipeptidylpeptidase... 130 4e-29
AM502223_97(AM502223|pid:none) Leishmania infantum chromosome 5. 127 2e-28
AK150126_1(AK150126|pid:none) Mus musculus bone marrow macrophag... 127 4e-28
AK031020_1(AK031020|pid:none) Mus musculus adult male thymus cDN... 127 4e-28
protein update 2009. 5.20
PSORT

psg: 0.75 gvh: 0.62 alm: 0.39 top: 0.53 tms: 0.00 mit: 0.16 mip: 0.00
nuc: 0.10 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

44.0 %: cytoplasmic
36.0 %: nuclear
8.0 %: mitochondrial
4.0 %: cytoskeletal
4.0 %: Golgi
4.0 %: vesicles of secretory system

>> prediction for CHS151 is cyt

5' end seq. ID -
5' end seq. -
Length of 5' end seq. -
3' end seq. ID CHS151Z
3' end seq.
>CHS151Z.Seq
NNNNNNNNNNTGGTTTCACAGATCCAAAGAAAGCTGAAGATGTCTACTATGTCAATTGGT
TGATTATGGCACGTGCTGGTGTCTGTGCATTGGAATTTTATAGTCCACCAAGTGAAGGTG
CACCAGGTAAATGGAGACAAGCTCATATGCAAGCCAGATATTGTATTTTAACAACATTCT
TACGTTCTGGTATTGTCACTTTAGACAAGACTGCCGACGATGTAATTGTCAAACTTGATA
AAAGTAAAATTAGAGGTATTGGTGTTAAAGCTGTTGGTGATTTCCTCAATAGATTAATGG
TTTACAAAGCAACTGCAAATATTGATGCCTCAATCAAATTATTCGATGAATATACTCATG
TCAATGAAGAATTCCTCGCCATTAGAGATATAGTTTTGGCTAAAAAGAAACCAAGAAAGG
TATTTGTTCAAGCTCATACATATCTCAATTCAAATGGTAAAGTTTGTCTTCAAGATTTTG
ATGACTCAACTCAAGGTATGATCGATTCAATGATCACCAGATTTGGTAAAGATGATTCTG
ATATGTTATAAAGCTTTTTATTAAATTTCCAAAAAATAAAATAATATAAAATAAAATAAA
ATAAAATAAAATAAAATATAAAATAAAATAAAATATAAAATAAAATAAAATATAAAATAA
ATAAATATT
Length of 3' end seq. 669
Connected seq. ID -
Connected seq. -
Length of connected seq. -
Full length Seq ID -
Full length Seq. -
Length of full length seq. -