>CHS136 (CHS136Q) /CSM/CH/CHS1-B/CHS136Q.Seq.d/
TTCAACTCAGTAATAATAATAATAAAAATAATAACAATAATAAGGAATTATAATCAAATA
ATAATATAGCTATAATCTATAATTACTATAGTAAAATTACGTATACATATATAAATAATT
ATTATTATCATTGTTTTTAAAAATAAATAAATAAATAATAAAAAAAAAAXXXXXXXXXXT
TCCTCTGCTGTTTCAAGCTCTGCCTCTGGTTCTTCTGCTGCTTCATCTTCACCATCATCA
TNTGCTGCAAGCTCTTCTCCATCTTCATCTGCTGCAAGCTCTTCTCCATCTTCATCTGCT
GCAAGCTCTTCCCCATCTTCATCTGCATCATCAAGCTCTTCCCCATCTTCATCCGCATCA
TCAAGCTCTGCCCCATCTTCATCTGCATCATCAAGCTCTGCTCCATCTTCATCTGCATCA
TCTTCATCTGCATCATCTTCATCTGCATCATCTGCAGCAACTACAGCTGCAACTACAATT
GCAACTACAGCTGCAACTACAACTGCAACTACAACCGCAACC

fnsviiiikiitiirnynqiii*l*siitivklrihi*iiiiiivfknk*INNKKK---

---FLCCFKLCLWFFCCFIFTIIXCCKLFSIFICCKLFSIFICCKLFPIFICIIKLFPIF
IRIIKLCPIFICIIKLCSIFICIIFICIIFICIICSNYSCNYNCNYSCNYNCNYNRN

Frame A:
fnsviiiikiitiirnynqiii*l*siitivklrihi*iiiiiivfknk*INNKKK---

---FLCCFKLCLWFFCCFIFTIIXCCKLFSIFICCKLFSIFICCKLFPIFICIIKLFPIF
IRIIKLCPIFICIIKLCSIFICIIFICIIFICIICSNYSCNYNCNYSCNYNCNYNRN

Frame B:
stq*****k**q**giiik**ysynl*ll**nyvyiyk*lllslflkink*iikkk---

---ssavsssasgssaassspssxaassspsssaassspsssaassspsssassssspss
sassssapsssassssapsssassssassssassaattaattiattaatttatttat

Frame C:
qlsnnnnknnnnnkel*snnniaiiynyyskitytyinnyyyhcf*k*ink**kk---

---pllfqalplvllllhlhhhhxlqallhlhllqallhlhllqalphlhlhhqalphlh
phhqalphlhlhhqallhlhlhhlhlhhlhlhhlqqlqlqlqlqlqlqlqlqlqpq

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHS136 (CHS136Q) /CSM/CH/CHS1-B/CHS136Q.Seq.d/                        438   e-122
SLH548 (SLH548Q) /CSM/SL/SLH5-B/SLH548Q.Seq.d/                        430   e-120
SLH472 (SLH472Q) /CSM/SL/SLH4-C/SLH472Q.Seq.d/                        430   e-120
SLH386 (SLH386Q) /CSM/SL/SLH3-D/SLH386Q.Seq.d/                        430   e-120
SLH308 (SLH308Q) /CSM/SL/SLH3-A/SLH308Q.Seq.d/                        430   e-120
SLE435 (SLE435Q) /CSM/SL/SLE4-B/SLE435Q.Seq.d/                        430   e-120
SLE218 (SLE218Q) /CSM/SL/SLE2-A/SLE218Q.Seq.d/                        430   e-120
SLE165 (SLE165Q) /CSM/SL/SLE1-C/SLE165Q.Seq.d/                        430   e-120
SLB780 (SLB780Q) /CSM/SL/SLB7-D/SLB780Q.Seq.d/                        430   e-120
SLB746 (SLB746Q) /CSM/SL/SLB7-B/SLB746Q.Seq.d/                        430   e-120

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

X16491|X16491.1 Dictyostelium discoideum sp96 gene for spore coat protein SP96.   430   e-116  1
AC117075|AC117075.2 Dictyostelium discoideum chromosome 2 map 5201047-5455781 strain AX4, complete sequence.   430   e-116  1
BQ867133|BQ867133.1 QGC9O01.yg.ab1 QG_ABCDI lettuce salinas Lactuca sativa cDNA clone QGC9O01, mRNA sequence.    34   7e-04  3
BQ858872|BQ858872.1 QGC11H15.yg.ab1 QG_ABCDI lettuce salinas Lactuca sativa cDNA clone QGC11H15, mRNA sequence.    32   7e-04  3
CV643325|CV643325.1 EST922078 Field isolate cDNA library Plasmodium vivax cDNA clone PVMEU82 5' end, mRNA sequence.    32   0.003  4
BU494840|BU494840.1 PfESToab68d10.y1 Plasmodium falciparum 3D7 asexual cDNA Plasmodium falciparum cDNA 5' similar to TR:O96230 O96230 ATP-DEPT. ACYL-COA SYNTHETASE ;, mRNA sequence.    28   0.003  5
AC068430|AC068430.2 Homo sapiens chromosome 1 clone RP11-199C18 map 1, LOW-PASS SEQUENCE SAMPLING.    30   0.006  3
AL050342|AL050342.42 Human DNA sequence from clone RP4-655K7 on chromosome 1p35.3-36.13  Contains part of a gene encoding a novel protein,.    30   0.006  3
CJ755530|CJ755530.1 Ipomoea nil cDNA clone:jmsf53a21, 5' end.      34   0.019  3
BW861092|BW861092.1 Branchiostoma floridae cDNA, neurula clone:bfne063e16, 5' end.    28   0.035  3

 ***** No hits found ******

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3039690
Number of Hits to DB: 83,480,265

 psg: 0.86  gvh: 0.66  alm: 0.02  top: 0.33  tms: 0.20  mit: 0.52  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 1.00  m3b: 0.00  m_ : 0.00 

	 36.0 %: endoplasmic reticulum
	 28.0 %: mitochondrial
	 12.0 %: plasma membrane
	  8.0 %: extracellular, including cell wall
	  4.0 %: Golgi
	  4.0 %: vacuolar
	  4.0 %: nuclear
	  4.0 %: vesicles of secretory system

>> prediction for CHS136 is end

>CHS136F.Seq
TTCAACTCAGTAATAATAATAATAAAAATAATAACAATAATAAGGAATTATAATCAAATA
ATAATATAGCTATAATCTATAATTACTATAGTAAAATTACGTATACATATATAAATAATT
ATTATTATCATTGTTTTTAAAAATAAATAAATAAATAATAAAAAAAAAANNNNNNNNNN

>CHS136Z.Seq
NNNNNNNNNNTTCCTCTGCTGTTTCAAGCTCTGCCTCTGGTTCTTCTGCTGCTTCATCTT
CACCATCATCATNTGCTGCAAGCTCTTCTCCATCTTCATCTGCTGCAAGCTCTTCTCCAT
CTTCATCTGCTGCAAGCTCTTCCCCATCTTCATCTGCATCATCAAGCTCTTCCCCATCTT
CATCCGCATCATCAAGCTCTGCCCCATCTTCATCTGCATCATCAAGCTCTGCTCCATCTT
CATCTGCATCATCTTCATCTGCATCATCTTCATCTGCATCATCTGCAGCAACTACAGCTG
CAACTACAATTGCAACTACAGCTGCAACTACAACTGCAACTACAACCGCAACC

>CHS136P.Seq
TTCAACTCAGTAATAATAATAATAAAAATAATAACAATAATAAGGAATTATAATCAAATA
ATAATATAGCTATAATCTATAATTACTATAGTAAAATTACGTATACATATATAAATAATT
ATTATTATCATTGTTTTTAAAAATAAATAAATAAATAATAAAAAAAAAA----------T
TCCTCTGCTGTTTCAAGCTCTGCCTCTGGTTCTTCTGCTGCTTCATCTTCACCATCATCA
TNTGCTGCAAGCTCTTCTCCATCTTCATCTGCTGCAAGCTCTTCTCCATCTTCATCTGCT
GCAAGCTCTTCCCCATCTTCATCTGCATCATCAAGCTCTTCCCCATCTTCATCCGCATCA
TCAAGCTCTGCCCCATCTTCATCTGCATCATCAAGCTCTGCTCCATCTTCATCTGCATCA
TCTTCATCTGCATCATCTTCATCTGCATCATCTGCAGCAACTACAGCTGCAACTACAATT
GCAACTACAGCTGCAACTACAACTGCAACTACAACCGCAACC