>CHS111 (CHS111Q) /CSM/CH/CHS1-A/CHS111Q.Seq.d/
XXXXXXXXXXCCACCACAAGNAACTTATGACTATAGTCNNCAACACCAACAATATGATTA
TAGTCAACAACAACAACAACAACAACAACAATATGATTATAGTCAACAACACACTGATCA
ACAACAATATGATTACCAAGCTCAAGATTATC

---HHKXLMTIVXNTNNMIIVNNNNNNNNNMIIVNNTLINNNMITKLKII

Frame A:
---HHKXLMTIVXNTNNMIIVNNNNNNNNNMIIVNNTLINNNMITKLKII


Frame B:
---ttxnl*l*sxtpti*l*stttttttti*l*stth*stti*lpssrl


Frame C:
---pqxtydysxqhqqydysqqqqqqqqqydysqqhtdqqqydyqaqdy

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VHH747 (VHH747Q) /CSM/VH/VHH7-B/VHH747Q.Seq.d/                         90   1e-17
VHH658 (VHH658Q) /CSM/VH/VHH6-C/VHH658Q.Seq.d/                         90   1e-17
CHS111 (CHS111Q) /CSM/CH/CHS1-A/CHS111Q.Seq.d/                         90   1e-17
CHK388 (CHK388Q) /CSM/CH/CHK3-D/CHK388Q.Seq.d/                         90   1e-17
CHK144 (CHK144Q) /CSM/CH/CHK1-B/CHK144Q.Seq.d/                         90   1e-17
CHI879 (CHI879Q) /CSM/CH/CHI8-D/CHI879Q.Seq.d/                         90   1e-17
AHP430 (AHP430Q) /CSM/AH/AHP4-B/AHP430Q.Seq.d/                         90   1e-17
AHI769 (AHI769Q) /CSM/AH/AHI7-C/AHI769Q.Seq.d/                         90   1e-17
AHA583 (AHA583Q) /CSM/AH/AHA5-D/AHA583Q.Seq.d/                         90   1e-17
AFL291 (AFL291Q) /CSM/AF/AFL2-D/AFL291Q.Seq.d/                         90   1e-17

 ***** No hits found ******

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Hits to DB: 1,293,397
Number of Sequences: 51505115
Number of extensions: 1293397
Number of successful extensions: 297786
Number of sequences better than 10.0: 0
length of query: 152
length of database: 55,298,822,589
effective HSP length: 22
effective length of query: 130
effective length of database: 54,165,710,059
effective search space: 7041542307670
effective search space used: 7041542307670
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.

 ***** No hits found ******

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3101297
Number of Hits to DB: 43,509,431

 psg: 0.85  gvh: 0.15  alm: 0.50  top: 0.47  tms: 0.00  mit: 0.40  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.40  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 56.0 %: nuclear
	 20.0 %: mitochondrial
	 20.0 %: cytoplasmic
	  4.0 %: cytoskeletal

>> prediction for CHS111 is nuc

>CHS111Z.Seq
NNNNNNNNNNCCACCACAAGNAACTTATGACTATAGTCNNCAACACCAACAATATGATTA
TAGTCAACAACAACAACAACAACAACAACAATATGATTATAGTCAACAACACACTGATCA
ACAACAATATGATTACCAAGCTCAAGATTATC