>CHR803 (CHR803Q) /CSM/CH/CHR8-A/CHR803Q.Seq.d/
XXXXXXXXXXGGAAAAACCAAATTTTTNAATTTTNGGGTTTTTTNNNNNCCAAAANAAAA
AAAAAANNTTTTTTTTTTTTTTNAAAAAAAAAAAAAAAAAAACAAAATGNAACTNTTATC
AGTNTTATTTATTATTTTNTTCNCTTTAGCTTTTGCATATGGTTGTAAAGACGAACCTTG
TGGTGCTGATGAAGTTAGTTTTACCTCACAGGATATATGCTTTTGTGTTGAANAGAAGTA
TTTNTATGATATATCAGTATCAATTTTCCTAAAATCNCAATGGGATAAATNTGGAACTCA
TTATGGTCAATATGAAATTNGACTTTTTAATAAAAGGGATACTGGNGCCTCATCAGTTTC
CGTATNTCTTGGTCCAAGCATTATTACCNCTGGTTTCCAAATATCCGGGGAATACAATAG
TATCNCTATTCCAAGGATNGAAAAANAAAATTCCTATTTTTTTAGNGCNCTTCNATTGGT
AGAGATTTTCCAAAAANTGGCANTAGATCAGTTACNTATTAAAAAAAAGTTTGCAGAAAA
AAAAATCATCCAA

---KTKFXNFXVFXXPKXKKXXFFFFXKKKKKNKMXLLSVLFIIXFXLAFAYGCKDEPCG
ADEVSFTSQDICFCVEXKYXYDISVSIFLKSQWDKXGTHYGQYEIXLFNKRDTGASSVSV
XLGPSIITXGFQISGEYNSIXIPRXEKXNSYFFXALXLVEIFQKXAXDQLXIKKKFAEKK
IIQ

Frame A:
---ekpnfxixgffxxqxkkkxffffxkkkkkktkxnxyqxyllfxsl*llhmvvktnlv
vlmklvlphriyafvlxrsixmiyqyqfs*nxnginxelimvnmkxdflikgilxphqfp
yxlvqallplvskypgntivslfqgxkxkipiflxxfxw*rfskxwx*isyxlkkslqkk
kss


Frame B:
---knqifxfxgfxxxkxkkkxffffxkkkkkkqnxtxisxiyyfxxfsfciwl*rrtlw
c**s*fyltgymllc*xevfx*yisinfpkixmg*xwnslwsi*nxtf**kgywxlisfr
xswskhyyxwfpnirgiq*yxyskdxkxkflff*xxsigrdfpkxgxrsvty*kkvcrkk
nhp


Frame C:
---KTKFXNFXVFXXPKXKKXXFFFFXKKKKKNKMXLLSVLFIIXFXLAFAYGCKDEPCG
ADEVSFTSQDICFCVEXKYXYDISVSIFLKSQWDKXGTHYGQYEIXLFNKRDTGASSVSV
XLGPSIITXGFQISGEYNSIXIPRXEKXNSYFFXALXLVEIFQKXAXDQLXIKKKFAEKK
IIQ

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHR803 (CHR803Q) /CSM/CH/CHR8-A/CHR803Q.Seq.d/                        615   e-175
SSA405 (SSA405Q) /CSM/SS/SSA4-A/SSA405Q.Seq.d/                        577   e-164
VSI746 (VSI746Q) /CSM/VS/VSI7-B/VSI746Q.Seq.d/                         34   2.1
SSM622 (SSM622Q) /CSM/SS/SSM6-A/SSM622Q.Seq.d/                         34   2.1
SHJ555 (SHJ555Q) /CSM/SH/SHJ5-C/SHJ555Q.Seq.d/                         34   2.1
SFI863 (SFI863Q) /CSM/SF/SFI8-C/SFI863Q.Seq.d/                         34   2.1
SFI763 (SFI763Q) /CSM/SF/SFI7-C/SFI763Q.Seq.d/                         34   2.1
SFI481 (SFI481Q) /CSM/SF/SFI4-D/SFI481Q.Seq.d/                         34   2.1
SFF428 (SFF428Q) /CSM/SF/SFF4-B/SFF428Q.Seq.d/                         34   2.1
SFF162 (SFF162Q) /CSM/SF/SFF1-C/SFF162Q.Seq.d/                         34   2.1

 ***** No hits found ******

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Hits to DB: 10,062,473
Number of Sequences: 51505157
Number of extensions: 10062473
Number of successful extensions: 726339
Number of sequences better than 10.0: 1
length of query: 553
length of database: 55,302,997,878
effective HSP length: 23
effective length of query: 530
effective length of database: 54,118,379,267
effective search space: 28682741011510
effective search space used: 28682741011510
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
[blastall] WARNING:  [000.000]  Reached max 400 HSPs in BlastSaveCurrentHsp, continuing with this limit

ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.

 ***** No hits found ******

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3101297
Number of Hits to DB: 587,370,710

 psg: 0.85  gvh: 0.69  alm: 0.43  top: 0.53  tms: 0.00  mit: 0.26  mip: 0.00
 nuc: 0.20  erl: 0.00  erm: 0.40  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 28.0 %: mitochondrial
	 28.0 %: nuclear
	 20.0 %: cytoplasmic
	  8.0 %: cytoskeletal
	  8.0 %: vacuolar
	  4.0 %: extracellular, including cell wall
	  4.0 %: endoplasmic reticulum

>> prediction for CHR803 is mit

>CHR803Z.Seq
NNNNNNNNNNGGAAAAACCAAATTTTTNAATTTTNGGGTTTTTTNNNNNCCAAAANAAAA
AAAAAANNTTTTTTTTTTTTTTNAAAAAAAAAAAAAAAAAAACAAAATGNAACTNTTATC
AGTNTTATTTATTATTTTNTTCNCTTTAGCTTTTGCATATGGTTGTAAAGACGAACCTTG
TGGTGCTGATGAAGTTAGTTTTACCTCACAGGATATATGCTTTTGTGTTGAANAGAAGTA
TTTNTATGATATATCAGTATCAATTTTCCTAAAATCNCAATGGGATAAATNTGGAACTCA
TTATGGTCAATATGAAATTNGACTTTTTAATAAAAGGGATACTGGNGCCTCATCAGTTTC
CGTATNTCTTGGTCCAAGCATTATTACCNCTGGTTTCCAAATATCCGGGGAATACAATAG
TATCNCTATTCCAAGGATNGAAAAANAAAATTCCTATTTTTTTAGNGCNCTTCNATTGGT
AGAGATTTTCCAAAAANTGGCANTAGATCAGTTACNTATTAAAAAAAAGTTTGCAGAAAA
AAAAATCATCCAA