>CHR786 (CHR786Q) /CSM/CH/CHR7-D/CHR786Q.Seq.d/
AAAAATAACATCAACAACCAACACTTCATCATCAAACACAAATATTCAATATTATAATTT
TATGGATCCTAGGTTTTTTTTTCGCAATGACAGAAGTTTTAAACAATAAAACTGAAAGTC
CAAACATTCAAAACTTTTCATCTGCAAGTTTGCAAGATGATAACAACAATACTGGTTTTG
ATGATTCANATAGAAAGCAAAAAATAGTTTATACATCAGATTTTTTAAAAAAATTTGATA
AAAACAAAACAAAAGAATTTTCACAAAATATAATGCAACCACAACAACCAATTGGTGCAC
CTCATTTAGGTGGNGGTGAATTATTCAACAACAATATCGATTTGGAAAATAACCAAACAC
ACGAATATAGAGGAATTATCCAAAGATTAAAATCAATCATTGTAAATTCAAAAGATGATA
ATTTAATGAGTATGATGAGAATGGTATTCTCTGAATCTAATCTTGGTAAATCATTTTTAG
TTGATGATTACAATCAAAAAAGAATACCAGATATTGGAGGACCAATTCAAAATTTTGTTT
TTTTAGGANATGTTGAACCATCACAAATGTCACCTACACCATTAAATTCATTTTTTTCAA
CACATGCAGCAAATTCTTXXXXXXXXXX

k*HQQPTLHHQTQIFNIIILWILGFFFAMTEVLNNKTESPNIQNFSSASLQDDNNNTGFD
DSXRKQKIVYTSDFLKKFDKNKTKEFSQNIMQPQQPIGAPHLGGGELFNNNIDLENNQTH
EYRGIIQRLKSIIVNSKDDNLMSMMRMVFSESNLGKSFLVDDYNQKRIPDIGGPIQNFVF
LGXVEPSQMSPTPLNSFFSTHAANS---

Frame A:
knninnqhfiikhkysil*fygs*vffsq*qkf*tiklkvqtfktfhlqvckmittilvl
mixieskk*fihqif*knliktkqknfhki*cnhnnqlvhli*vxvnysttisiwkitkh
tnieelskd*nqsl*iqkmii**v**ewyslnlilvnhf*lmitikkeyqiledqfkilf
f*xmlnhhkchlhh*ihffqhmqqi---


Frame B:
kitsttntsssntniqyynfmdprfffrndrsfkq*n*kskhsklfickfar**qqywf*
*fx*kaknslyirffkki**kqnkriftkynattttnwctsfrwx*iiqqqyrfgk*pnt
ri*rnypkikinhckfkr**fneydengil*i*sw*iifs**lqskkntrywrtnskfcf
frxc*titnvtytikfiffntcskf---


Frame C:
k*HQQPTLHHQTQIFNIIILWILGFFFAMTEVLNNKTESPNIQNFSSASLQDDNNNTGFD
DSXRKQKIVYTSDFLKKFDKNKTKEFSQNIMQPQQPIGAPHLGGGELFNNNIDLENNQTH
EYRGIIQRLKSIIVNSKDDNLMSMMRMVFSESNLGKSFLVDDYNQKRIPDIGGPIQNFVF
LGXVEPSQMSPTPLNSFFSTHAANS---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SFA408 (SFA408Q) /CSM/SF/SFA4-A/SFA408Q.Seq.d/                        599   e-170
CHR786 (CHR786Q) /CSM/CH/CHR7-D/CHR786Q.Seq.d/                        599   e-170
CHE817 (CHE817Q) /CSM/CH/CHE8-A/CHE817Q.Seq.d/                        593   e-168
CHH864 (CHH864Q) /CSM/CH/CHH8-C/CHH864Q.Seq.d/                        589   e-167
CHE680 (CHE680Q) /CSM/CH/CHE6-D/CHE680Q.Seq.d/                        585   e-166
CHK426 (CHK426Q) /CSM/CH/CHK4-B/CHK426Q.Seq.d/                        474   e-133
CFB402 (CFB402Q) /CSM/CF/CFB4-A/CFB402Q.Seq.d/                        337   1e-91
SHG344 (SHG344Q) /CSM/SH/SHG3-B/SHG344Q.Seq.d/                         38   0.16
SHE878 (SHE878Q) /CSM/SH/SHE8-D/SHE878Q.Seq.d/                         38   0.16
SHE423 (SHE423Q) /CSM/SH/SHE4-A/SHE423Q.Seq.d/                         38   0.16

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC168458|AC168458.2 Strongylocentrotus purpuratus clone R3-35J4, WORKING DRAFT SEQUENCE, 50 unordered pieces.    48   0.22   1
AC129423|AC129423.4 Rattus norvegicus clone CH230-125C18, WORKING DRAFT SEQUENCE, 4 unordered pieces.    48   0.22   1
AC123237|AC123237.4 Rattus norvegicus clone CH230-146N10, WORKING DRAFT SEQUENCE, 6 unordered pieces.    48   0.22   1
AC094634|AC094634.5 Rattus norvegicus clone CH230-5D18, WORKING DRAFT SEQUENCE, 3 unordered pieces.    48   0.22   1
CC237175|CC237175.1 CH261-162L18_Sp6.1 CH261 Gallus gallus genomic clone CH261-162L18, DNA sequence.    48   0.22   1
CD398919|CD398919.1 Gm_ck20311 Soybean induced by Salicylic Acid Glycine max cDNA 3', mRNA sequence.    46   0.87   1
CD397244|CD397244.1 Gm_ck17944 Soybean induced by Salicylic Acid Glycine max cDNA 3', mRNA sequence.    46   0.87   1
BU765150|BU765150.1 sas23e05.y1 Gm-c1080 Glycine max cDNA clone SOYBEAN CLONE ID: Gm-c1080-4809 5', mRNA sequence.    46   0.87   1
BC084217|BC084217.1 Xenopus laevis hypothetical LOC495062, mRNA (cDNA clone MGC:80650 IMAGE:5506840), complete cds.    44   0.94   2
AC149479|AC149479.1 Populus balsamifera subsp. trichocarpa clone Pop1-017N13, complete sequence.    36   1.1    5

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR382400_87(CR382400|pid:none) Plasmodium falciparum chromosome ...    37   0.57
S43574(S43574)C05B5.3 protein (clone C05B5) - Caenorhabditis ele...    36   0.75
(P34291) RecName: Full=Prion-like-(Q/N-rich) domain-bearing prot...    36   0.75
AC116956_10(AC116956|pid:none) Dictyostelium discoideum chromoso...    36   0.75
AL035475_43(AL035475|pid:none) Plasmodium falciparum MAL4P2.  &A...    36   0.98
U85963_1(U85963|pid:none) Plasmodium falciparum asparagine-rich ...    36   0.98
AL031745_34(AL031745|pid:none) Plasmodium falciparum DNA from MA...    36   0.98
AL844501_43(AL844501|pid:none) Plasmodium falciparum strain 3D7,...    36   0.98
BA000026_153(BA000026|pid:none) Mycoplasma penetrans HF-2 DNA, c...    35   1.7
AL844509_410(AL844509|pid:none) Plasmodium falciparum 3D7 chromo...    35   1.7

 psg: 0.99  gvh: 0.58  alm: 0.23  top: 0.30  tms: 0.07  mit: 0.28  mip: 0.00
 nuc: 0.06  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 1.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 28.0 %: endoplasmic reticulum
	 20.0 %: cytoplasmic
	 16.0 %: mitochondrial
	 16.0 %: nuclear
	  8.0 %: Golgi
	  4.0 %: plasma membrane
	  4.0 %: vesicles of secretory system
	  4.0 %: extracellular, including cell wall

>> prediction for CHR786 is end

>CHR786F.Seq
AAAAATAACATCAACAACCAACACTTCATCATCAAACACAAATATTCAATATTATAATTT
TATGGATCCTAGGTTTTTTTTTCGCAATGACAGAAGTTTTAAACAATAAAACTGAAAGTC
CAAACATTCAAAACTTTTCATCTGCAAGTTTGCAAGATGATAACAACAATACTGGTTTTG
ATGATTCANATAGAAAGCAAAAAATAGTTTATACATCAGATTTTTTAAAAAAATTTGATA
AAAACAAAACAAAAGAATTTTCACAAAATATAATGCAACCACAACAACCAATTGGTGCAC
CTCATTTAGGTGGNGGTGAATTATTCAACAACAATATCGATTTGGAAAATAACCAAACAC
ACGAATATAGAGGAATTATCCAAAGATTAAAATCAATCATTGTAAATTCAAAAGATGATA
ATTTAATGAGTATGATGAGAATGGTATTCTCTGAATCTAATCTTGGTAAATCATTTTTAG
TTGATGATTACAATCAAAAAAGAATACCAGATATTGGAGGACCAATTCAAAATTTTGTTT
TTTTAGGANATGTTGAACCATCACAAATGTCACCTACACCATTAAATTCATTTTTTTCAA
CACATGCAGCAAATTCTTNNNNNNNNNN