>CHR754 (CHR754Q) /CSM/CH/CHR7-C/CHR754Q.Seq.d/
ATTAATTTTTGTATGATTATTATAATTCAAATTAAAAATATATTATATAAATATATATAA
ATATATATTAAATAAAAATAATAATAAAATAAATTTAATATAATAAAAATTTTTTTGAGA
AAAAAAAAAANTAAAAAAAAAAAAAAAAAAAAAAAAACCCNAAAAAAANCCNAAAAAAAA
AANCCCNNNAAAAAAAXXXXXXXXXXTGTTCAGGGTTGTAACCACTTGTGATGTTAAGAC
TGGTAAATGTGTAGCTCAAGATTCTCATTGTGATGATGGTAATCCATGTACTGATAATGC
TTGTGTCGCTTCAGCTAATAGTACCGCCAATAGCCAAGTTGGTCAATGCACTCAAACTCC
AACTGCTAAATGTGATTTGGGTGATAAATGTATGGTTTACAGTTGTACCTTGGAAGGTGG
TTGTAATGCAACTCAACGTGTTTGTCCAAACTCTGGTGCTTGTAAAATTGGTTATTGTGA
ACCTGGTTTCGGTTGTAAATTAAAGGATAGAGTTTGTTCTTCCGATTGGTATTGTATTGA
AGCTCAATGTGATGCAAAATATGGTTGCATTCAATTCGATAGAAGATGTGCTCCTGATAA
TAGTAAATGTCAAGAAGGTGTCTGTGTAAACAATACTGCTATCGGTAAAAATGATGGAAA
ATGTATTTCTGAAGATTATGATCCAAAACCATTTGTTTGTCAAAAAGCTGCTTTAGTTTC
AACTGCTGTTATTGCAAGTGTTGTTGTAGTTGGTGCTGTTGTTTTAGGTGCTG

infcmiiiiqiknilykyi*iyik*k***NKFNIIKIFLRKKKXKKKKKKKKTXKKXXKK
XPXKK---

---FRVVTTCDVKTGKCVAQDSHCDDGNPCTDNACVASANSTANSQVGQCTQTPTAKCDL
GDKCMVYSCTLEGGCNATQRVCPNSGACKIGYCEPGFGCKLKDRVCSSDWYCIEAQCDAK
YGCIQFDRRCAPDNSKCQEGVCVNNTAIGKNDGKCISEDYDPKPFVCQKAALVSTAVIAS
VVVVGAVVLGA

Frame A:
infcmiiiiqiknilykyi*iyik*k***NKFNIIKIFLRKKKXKKKKKKKKTXKKXXKK
XPXKK---

---csgl*plvmlrlvnv*lkilivmmvihvlimlvslqlivppiaklvnalklqllnvi
wvinvwftvvpwkvvvmqlnvfvqtlvlvklvivnlvsvvn*riefvlpigivlklnvmq
nmvafnsiedvlliivnvkkvsv*tillsvkmmenvflkimiqnhlfvkkll*fqllllq
vll*lvllf*vl

Frame B:
lifv*ll*fklkiyyiniykyilnknnnkinli**kff*ekkkxkkkkkkkkpxkxpkkk
xpxkk---

---vqgcnhl*c*dw*mcssrfsl**w*smy**clcrfs**yrq*pswsmhsnsnc*m*f
g**myglqlylgrwl*cnstclsklwcl*nwll*twfrl*ikg*slffrlvly*ssm*ck
iwlhsir*kmcs****msrrclckqycyr*k*wkmyf*rl*skticlskscfsfnccyck
cccswcccfrc

Frame C:
*flydyynsn*kyii*iyiniy*ikiiik*i*ynknffekkkx*kkkkkkknpkkxxkkk
xxxk---

---FRVVTTCDVKTGKCVAQDSHCDDGNPCTDNACVASANSTANSQVGQCTQTPTAKCDL
GDKCMVYSCTLEGGCNATQRVCPNSGACKIGYCEPGFGCKLKDRVCSSDWYCIEAQCDAK
YGCIQFDRRCAPDNSKCQEGVCVNNTAIGKNDGKCISEDYDPKPFVCQKAALVSTAVIAS
VVVVGAVVLGA

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHR754 (CHR754Q) /CSM/CH/CHR7-C/CHR754Q.Seq.d/                       1124   0.0
SHD341 (SHD341Q) /CSM/SH/SHD3-B/SHD341Q.Seq.d/                       1110   0.0
CHL881 (CHL881Q) /CSM/CH/CHL8-D/CHL881Q.Seq.d/                       1110   0.0
CHL461 (CHL461Q) /CSM/CH/CHL4-C/CHL461Q.Seq.d/                       1110   0.0
AHM601 (AHM601Q) /CSM/AH/AHM6-A/AHM601Q.Seq.d/                       1110   0.0
AHA195 (AHA195Q) /CSM/AH/AHA1-D/AHA195Q.Seq.d/                       1110   0.0
CHQ678 (CHQ678Q) /CSM/CH/CHQ6-D/CHQ678Q.Seq.d/                       1108   0.0
CHQ324 (CHQ324Q) /CSM/CH/CHQ3-A/CHQ324Q.Seq.d/                       1104   0.0
AHM832 (AHM832Q) /CSM/AH/AHM8-B/AHM832Q.Seq.d/                       1104   0.0
CHH448 (CHH448Q) /CSM/CH/CHH4-B/CHH448Q.Seq.d/                       1096   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 map 1685067-2090751 strain AX4, complete sequence.    66   1e-06  1
AC115684|AC115684.2 Dictyostelium discoideum chromosome 2 map 3108975-3191114 strain AX4, complete sequence.    42   0.003  4
CC946427|CC946427.1 BOIFV20TF BO_1.4_1.6_KB_nuc Brassica oleracea genomic clone BOIFV20, genomic survey sequence.    50   0.069  1
CC075688|CC075688.1 CSU-K33r.25G4.SP6 CSU-K33r Aedes aegypti genomic clone CSU-K33r.25G4, DNA sequence.    50   0.069  1
BH960705|BH960705.1 odd88f07.b1 B.oleracea002 Brassica oleracea genomic, DNA sequence.    50   0.069  1
AR549621|AR549621.1 Sequence 4752 from patent US 6747137.          46   0.32   2
AL287678|AL287678.1 Tetraodon nigroviridis genome survey sequence T7 end of clone 105D19 of library G from Tetraodon nigroviridis.    38   0.96   2
CX053834|CX053834.1 UCRCS09_8E08_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-8E08-I15-1-5.g, mRNA sequence.    46   1.1    1
CX118034|CX118034.1 EI112L19 A normalized whole-life-cycle cDNA library of rice Oryza sativa (indica cultivar-group) cDNA clone EI112L19 5', mRNA sequence.    46   1.1    1
CB652801|CB652801.1 OSJNEc03D04.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA clone OSJNEc03D04 5', mRNA sequence.    46   1.1    1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54P69) RecName: Full=Protein psiM; Flags: Precursor;                363   3e-99
(Q86HT1) RecName: Full=Protein psiL; Flags: Precursor;  &AC11695...   159   1e-37
(Q557E9) RecName: Full=Protein psiG; Flags: Precursor;  &AC11568...   152   8e-36
(Q94494) RecName: Full=Protein psiH; Flags: Precursor;  &U67940_...   147   5e-34
(Q54VS2) RecName: Full=Protein psiP; Flags: Precursor;                139   1e-31
(Q54G85) RecName: Full=Protein psiJ; Flags: Precursor;                120   5e-26
(Q54CH8) RecName: Full=Protein psiN; Flags: Precursor;                103   8e-21
S44208(S44208) extracellular matrix protein B - Dictyostelium mi...    75   2e-12
AC117072_61(AC117072|pid:none) Dictyostelium discoideum chromoso...    72   2e-11
AC116984_103(AC116984|pid:none) Dictyostelium discoideum chromos...    71   3e-11

 psg: 0.12  gvh: 0.39  alm: 0.19  top: 0.60  tms: 0.07  mit: 0.38  mip: 0.07
 nuc: 0.41  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 1.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 24.0 %: nuclear
	 20.0 %: cytoplasmic
	 16.0 %: vesicles of secretory system
	 12.0 %: endoplasmic reticulum
	 12.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: Golgi
	  4.0 %: vacuolar
	  4.0 %: plasma membrane

>> prediction for CHR754 is nuc

>CHR754F.Seq
ATTAATTTTTGTATGATTATTATAATTCAAATTAAAAATATATTATATAAATATATATAA
ATATATATTAAATAAAAATAATAATAAAATAAATTTAATATAATAAAAATTTTTTTGAGA
AAAAAAAAAANTAAAAAAAAAAAAAAAAAAAAAAAAACCCNAAAAAAANCCNAAAAAAAA
AANCCCNNNAAAAAAANNNNNNNNNN

>CHR754Z.Seq
NNNNNNNNNNTGTTCAGGGTTGTAACCACTTGTGATGTTAAGACTGGTAAATGTGTAGCT
CAAGATTCTCATTGTGATGATGGTAATCCATGTACTGATAATGCTTGTGTCGCTTCAGCT
AATAGTACCGCCAATAGCCAAGTTGGTCAATGCACTCAAACTCCAACTGCTAAATGTGAT
TTGGGTGATAAATGTATGGTTTACAGTTGTACCTTGGAAGGTGGTTGTAATGCAACTCAA
CGTGTTTGTCCAAACTCTGGTGCTTGTAAAATTGGTTATTGTGAACCTGGTTTCGGTTGT
AAATTAAAGGATAGAGTTTGTTCTTCCGATTGGTATTGTATTGAAGCTCAATGTGATGCA
AAATATGGTTGCATTCAATTCGATAGAAGATGTGCTCCTGATAATAGTAAATGTCAAGAA
GGTGTCTGTGTAAACAATACTGCTATCGGTAAAAATGATGGAAAATGTATTTCTGAAGAT
TATGATCCAAAACCATTTGTTTGTCAAAAAGCTGCTTTAGTTTCAACTGCTGTTATTGCA
AGTGTTGTTGTAGTTGGTGCTGTTGTTTTAGGTGCTG

>CHR754P.Seq
ATTAATTTTTGTATGATTATTATAATTCAAATTAAAAATATATTATATAAATATATATAA
ATATATATTAAATAAAAATAATAATAAAATAAATTTAATATAATAAAAATTTTTTTGAGA
AAAAAAAAAANTAAAAAAAAAAAAAAAAAAAAAAAAACCCNAAAAAAANCCNAAAAAAAA
AANCCCNNNAAAAAAA----------TGTTCAGGGTTGTAACCACTTGTGATGTTAAGAC
TGGTAAATGTGTAGCTCAAGATTCTCATTGTGATGATGGTAATCCATGTACTGATAATGC
TTGTGTCGCTTCAGCTAATAGTACCGCCAATAGCCAAGTTGGTCAATGCACTCAAACTCC
AACTGCTAAATGTGATTTGGGTGATAAATGTATGGTTTACAGTTGTACCTTGGAAGGTGG
TTGTAATGCAACTCAACGTGTTTGTCCAAACTCTGGTGCTTGTAAAATTGGTTATTGTGA
ACCTGGTTTCGGTTGTAAATTAAAGGATAGAGTTTGTTCTTCCGATTGGTATTGTATTGA
AGCTCAATGTGATGCAAAATATGGTTGCATTCAATTCGATAGAAGATGTGCTCCTGATAA
TAGTAAATGTCAAGAAGGTGTCTGTGTAAACAATACTGCTATCGGTAAAAATGATGGAAA
ATGTATTTCTGAAGATTATGATCCAAAACCATTTGTTTGTCAAAAAGCTGCTTTAGTTTC
AACTGCTGTTATTGCAAGTGTTGTTGTAGTTGGTGCTGTTGTTTTAGGTGCTG