>CHR752 (CHR752Q) /CSM/CH/CHR7-C/CHR752Q.Seq.d/
GAGTTACTTCGTTTTTATATAACACGCACAATAATATTATTATTTAAAATAATTGTAACT
GTATTTTATTAAAAATATAATTATTTCAAATAGTATATATAAAAAACAAAGATGGCAGAT
GATGCAATTAGAATAGCAATTGTAAATGCAGATAGATGCAAACCAAAGAAATGTAGTCAA
GAATGTAAAAAGTATTGCCCAGTCGTAAAGATGGGTAAACTTTGTATTGAAGTTAAACCA
ACATCAAAGATGTCATACATTTCAGAAGAACTTTGTAATGGTTGTGGTATTTGTGTAAAG
AAATGTCCATTCGAAGCAATTCAAATCATTAATTTACCAAAGAATTTAACCAAAGAAACC
ACACATCGTTATGGTCCAAACAGTTTCAAACTTCATAGATTACCAACACCACGTCCAGGT
CAAGTATTGGGTTTAGTAGGTACCAATGGTATTGGTAAATCCACTGCCTTAAAGGTTTTA
GCTGGTAAATTAAAACCAAATTTAGGTCTCTACGATAATCCACCAACTTGGGATGAAATC
ATTTCTTTCTTCCGTGGTAATGAACTTCGATCCTATTTCACTAGAATTCTCGGTGAAGAX
XXXXXXXXXCTGAAATCATCGTTATGTTGGGTCAAAACGGTACCGGTAAGACCACCTTTA
TCAGAATGTTGGCTGGTCATATGCCATCCGATACTGATGCTCAAGTTCCAGAGTTGAATG
TCAGTTACAAACCACAAAAAATCGATCCAAAATTCCCAGGTTCCGTTAGAGAATTGATTA
ATAAACGTATTTGCAACACTTTCCTTCATCCACAATTCCAATCCGATGTCGTTAAACCAT
TAAACATTGAAAACATCATCGACAATCAAGTACTCAATTTATCTGGTGGTGAGTTACAAC
GTGTTGCCATCGTTTTATGTTTAGGTCAACCTGCTGATATCTATCTCATTGATGAACCAT
CCGCTTATTTGGATTCTGAACAACGTATTATCGTCTCTAAAGTCATCAAGAGATTCATTC
TTCACGCTGGTAAATCTGGTTTCATCGTAGAGCACGATTTCATTATGGCCACTTATTTAG
CTGATCGTGTCATCGTTTATGATGGTATTCCAGGTGTCTCTTGTGTTGCTAATACTCCAC
AATCTCTCCTCACTGGTATGAACTCTTTCCTTAAATCTCTCGAAATCACTTTCCGTCGTG
ATCCATCCAATTTCCGTCCAAGAATTAACAAATTAAATTCAATCAAAGATAATGAACAAA
AAGCTGCTGGTAATTATTTCTTCCTTGATAATGTTGAGAAAAAAAAAG

ellrfyitrtiillfkiivtvfy*kynyfk*yi*KTKMADDAIRIAIVNADRCKPKKCSQ
ECKKYCPVVKMGKLCIEVKPTSKMSYISEELCNGCGICVKKCPFEAIQIINLPKNLTKET
THRYGPNSFKLHRLPTPRPGQVLGLVGTNGIGKSTALKVLAGKLKPNLGLYDNPPTWDEI
ISFFRGNELRSYFTRILGE---

---EIIVMLGQNGTGKTTFIRMLAGHMPSDTDAQVPELNVSYKPQKIDPKFPGSVRELIN
KRICNTFLHPQFQSDVVKPLNIENIIDNQVLNLSGGELQRVAIVLCLGQPADIYLIDEPS
AYLDSEQRIIVSKVIKRFILHAGKSGFIVEHDFIMATYLADRVIVYDGIPGVSCVANTPQ
SLLTGMNSFLKSLEITFRRDPSNFRPRINKLNSIKDNEQKAAGNYFFLDNVEKKK

Frame A:
ellrfyitrtiillfkiivtvfy*kynyfk*yi*KTKMADDAIRIAIVNADRCKPKKCSQ
ECKKYCPVVKMGKLCIEVKPTSKMSYISEELCNGCGICVKKCPFEAIQIINLPKNLTKET
THRYGPNSFKLHRLPTPRPGQVLGLVGTNGIGKSTALKVLAGKLKPNLGLYDNPPTWDEI
ISFFRGNELRSYFTRILGE---

---lksslcwvktvpvrpplsecwlvichpilmlkfqs*msvtnhkksiqnsqvplen*l
invfatlsfihnsnpmslnh*tlktsstikysiylvvsynvlpsfyv*vnllisislmnh
pliwilnnvlsslkssrdsfftlvnlvss*stislwpli*livssfmmvfqvslvllilh
nlsslv*tlslnlskslsvvihpisvqeltn*iqskimnkkllviisslimlrkkk

Frame B:
syfvfi*haq*yyylk*l*lyfikniiisnsiykkqrwqmmqle*ql*mqidanqrnvvk
nvksiaqs*rwvnfvlklnqhqrchtfqknfvmvvvfv*rnvhskqfksliyqri*pkkp
hivmvqtvsnfidyqhhvqvkywv**vpmvlvnplp*rf*lvn*nqi*vstiihqlgmks
flssvvmnfdpislefsvk---

---*nhryvgskryr*dhlyqnvgwsyairy*csssrvecqlqttknrskiprfr*rid*
*tylqhfpsstipircr*tikh*khhrqsstqfiww*vttcchrfmfrstc*ylsh**ti
rlfgf*ttyyrl*shqeihssrw*iwfhrrarfhyghlfs*schrl*wysrcllcc*yst
isphwyelfp*isrnhfps*siqfpskn*qikfnqr**tkscw*lflp**c*ekk

Frame C:
vtsflynthnniii*nncncillki*lfqivyiknkdgr*cn*nsnckcr*mqtkem*sr
m*kvlpsrkdg*tly*s*tnikdvihfrrtl*wlwylckemsirsnsnh*ftkefnqrnh
tslwskqfqts*itnttsrssigfsryqwyw*ihclkgfsw*iktkfrslr*stnlg*nh
fflpw**tsilfh*nsr*r---

---EIIVMLGQNGTGKTTFIRMLAGHMPSDTDAQVPELNVSYKPQKIDPKFPGSVRELIN
KRICNTFLHPQFQSDVVKPLNIENIIDNQVLNLSGGELQRVAIVLCLGQPADIYLIDEPS
AYLDSEQRIIVSKVIKRFILHAGKSGFIVEHDFIMATYLADRVIVYDGIPGVSCVANTPQ
SLLTGMNSFLKSLEITFRRDPSNFRPRINKLNSIKDNEQKAAGNYFFLDNVEKKK

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHR752 (CHR752Q) /CSM/CH/CHR7-C/CHR752Q.Seq.d/                       2345   0.0
VHI606 (VHI606Q) /CSM/VH/VHI6-A/VHI606Q.Seq.d/                       1360   0.0
VHE148 (VHE148Q) /CSM/VH/VHE1-B/VHE148Q.Seq.d/                       1358   0.0
CHR192 (CHR192Q) /CSM/CH/CHR1-D/CHR192Q.Seq.d/                       1358   0.0
VHB384 (VHB384Q) /CSM/VH/VHB3-D/VHB384Q.Seq.d/                       1350   0.0
SFK682 (SFK682Q) /CSM/SF/SFK6-D/SFK682Q.Seq.d/                       1338   0.0
VHC726 (VHC726Q) /CSM/VH/VHC7-B/VHC726Q.Seq.d/                       1336   0.0
CHM444 (CHM444Q) /CSM/CH/CHM4-B/CHM444Q.Seq.d/                       1326   0.0
CFH447 (CFH447Q) /CSM/CF/CFH4-B/CFH447Q.Seq.d/                       1308   0.0
VFK139 (VFK139Q) /CSM/VF/VFK1-B/VFK139Q.Seq.d/                       1304   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AY077634|AY077634.1 Dictyostelium discoideum RNaseL inhibitor-like protein ABCE.1 gene, complete cds.  1364   0.0    1
AX488972|AX488972.1 Sequence 6272 from Patent WO02053728.          84   3e-66  11
AX831598|AX831598.1 Sequence 2318 from Patent WO03072602.          78   6e-53  8
AX820568|AX820568.1 Sequence 2318 from Patent EP1338608.           78   6e-53  8
AX596270|AX596270.1 Sequence 1924 from Patent EP1258494.           78   6e-53  8
AR147511|AR147511.1 Sequence 21 from patent US 6221597.            78   6e-53  8
AY723776|AY723776.1 Saccharomyces cerevisiae clone FLH001609.01X YDR091C gene, complete cds.    78   6e-53  8
AR551526|AR551526.1 Sequence 6657 from patent US 6747137.          84   2e-50  8
Z50111|Z50111.1 S.cerevisiae chromosome IV cosmid 6652.            78   2e-48  8
AY450958|AY450958.1 Cercopithecus aethiops RNase L inhibitor mRNA, complete cds.    56   6e-36  8

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY077634_1(AY077634|pid:none) Dictyostelium discoideum RNaseL in...   456   e-127
BT044624_1(BT044624|pid:none) Salmo salar clone ssal-rgf-001-081...   344   4e-93
AM467716_1(AM467716|pid:none) Vitis vinifera contig VV78X234292....   342   2e-92
AY450958_1(AY450958|pid:none) Cercopithecus aethiops RNase L inh...   340   5e-92
AB168951_1(AB168951|pid:none) Macaca fascicularis testis cDNA, c...   340   5e-92
AK226939_1(AK226939|pid:none) Arabidopsis thaliana mRNA for RNas...   340   5e-92
AK221885_1(AK221885|pid:none) Arabidopsis thaliana mRNA for RNas...   340   5e-92
(P61221) RecName: Full=ATP-binding cassette sub-family E member ...   340   5e-92
AK167704_1(AK167704|pid:none) Mus musculus 14 days embryo liver ...   340   5e-92
BC066794_1(BC066794|pid:none) Mus musculus ATP-binding cassette,...   340   5e-92

 psg: 0.61  gvh: 0.30  alm: 0.37  top: 0.53  tms: 0.00  mit: 0.24  mip: 0.00
 nuc: 0.03  erl: 0.00  erm: 0.40  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: nuclear
	 40.0 %: cytoplasmic
	  8.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: peroxisomal

>> prediction for CHR752 is nuc

>CHR752F.Seq
GAGTTACTTCGTTTTTATATAACACGCACAATAATATTATTATTTAAAATAATTGTAACT
GTATTTTATTAAAAATATAATTATTTCAAATAGTATATATAAAAAACAAAGATGGCAGAT
GATGCAATTAGAATAGCAATTGTAAATGCAGATAGATGCAAACCAAAGAAATGTAGTCAA
GAATGTAAAAAGTATTGCCCAGTCGTAAAGATGGGTAAACTTTGTATTGAAGTTAAACCA
ACATCAAAGATGTCATACATTTCAGAAGAACTTTGTAATGGTTGTGGTATTTGTGTAAAG
AAATGTCCATTCGAAGCAATTCAAATCATTAATTTACCAAAGAATTTAACCAAAGAAACC
ACACATCGTTATGGTCCAAACAGTTTCAAACTTCATAGATTACCAACACCACGTCCAGGT
CAAGTATTGGGTTTAGTAGGTACCAATGGTATTGGTAAATCCACTGCCTTAAAGGTTTTA
GCTGGTAAATTAAAACCAAATTTAGGTCTCTACGATAATCCACCAACTTGGGATGAAATC
ATTTCTTTCTTCCGTGGTAATGAACTTCGATCCTATTTCACTAGAATTCTCGGTGAAGAN
NNNNNNNNN

>CHR752Z.Seq
NNNNNNNNNNCTGAAATCATCGTTATGTTGGGTCAAAACGGTACCGGTAAGACCACCTTT
ATCAGAATGTTGGCTGGTCATATGCCATCCGATACTGATGCTCAAGTTCCAGAGTTGAAT
GTCAGTTACAAACCACAAAAAATCGATCCAAAATTCCCAGGTTCCGTTAGAGAATTGATT
AATAAACGTATTTGCAACACTTTCCTTCATCCACAATTCCAATCCGATGTCGTTAAACCA
TTAAACATTGAAAACATCATCGACAATCAAGTACTCAATTTATCTGGTGGTGAGTTACAA
CGTGTTGCCATCGTTTTATGTTTAGGTCAACCTGCTGATATCTATCTCATTGATGAACCA
TCCGCTTATTTGGATTCTGAACAACGTATTATCGTCTCTAAAGTCATCAAGAGATTCATT
CTTCACGCTGGTAAATCTGGTTTCATCGTAGAGCACGATTTCATTATGGCCACTTATTTA
GCTGATCGTGTCATCGTTTATGATGGTATTCCAGGTGTCTCTTGTGTTGCTAATACTCCA
CAATCTCTCCTCACTGGTATGAACTCTTTCCTTAAATCTCTCGAAATCACTTTCCGTCGT
GATCCATCCAATTTCCGTCCAAGAATTAACAAATTAAATTCAATCAAAGATAATGAACAA
AAAGCTGCTGGTAATTATTTCTTCCTTGATAATGTTGAGAAAAAAAAAG

>CHR752P.Seq
GAGTTACTTCGTTTTTATATAACACGCACAATAATATTATTATTTAAAATAATTGTAACT
GTATTTTATTAAAAATATAATTATTTCAAATAGTATATATAAAAAACAAAGATGGCAGAT
GATGCAATTAGAATAGCAATTGTAAATGCAGATAGATGCAAACCAAAGAAATGTAGTCAA
GAATGTAAAAAGTATTGCCCAGTCGTAAAGATGGGTAAACTTTGTATTGAAGTTAAACCA
ACATCAAAGATGTCATACATTTCAGAAGAACTTTGTAATGGTTGTGGTATTTGTGTAAAG
AAATGTCCATTCGAAGCAATTCAAATCATTAATTTACCAAAGAATTTAACCAAAGAAACC
ACACATCGTTATGGTCCAAACAGTTTCAAACTTCATAGATTACCAACACCACGTCCAGGT
CAAGTATTGGGTTTAGTAGGTACCAATGGTATTGGTAAATCCACTGCCTTAAAGGTTTTA
GCTGGTAAATTAAAACCAAATTTAGGTCTCTACGATAATCCACCAACTTGGGATGAAATC
ATTTCTTTCTTCCGTGGTAATGAACTTCGATCCTATTTCACTAGAATTCTCGGTGAAGA-
---------CTGAAATCATCGTTATGTTGGGTCAAAACGGTACCGGTAAGACCACCTTTA
TCAGAATGTTGGCTGGTCATATGCCATCCGATACTGATGCTCAAGTTCCAGAGTTGAATG
TCAGTTACAAACCACAAAAAATCGATCCAAAATTCCCAGGTTCCGTTAGAGAATTGATTA
ATAAACGTATTTGCAACACTTTCCTTCATCCACAATTCCAATCCGATGTCGTTAAACCAT
TAAACATTGAAAACATCATCGACAATCAAGTACTCAATTTATCTGGTGGTGAGTTACAAC
GTGTTGCCATCGTTTTATGTTTAGGTCAACCTGCTGATATCTATCTCATTGATGAACCAT
CCGCTTATTTGGATTCTGAACAACGTATTATCGTCTCTAAAGTCATCAAGAGATTCATTC
TTCACGCTGGTAAATCTGGTTTCATCGTAGAGCACGATTTCATTATGGCCACTTATTTAG
CTGATCGTGTCATCGTTTATGATGGTATTCCAGGTGTCTCTTGTGTTGCTAATACTCCAC
AATCTCTCCTCACTGGTATGAACTCTTTCCTTAAATCTCTCGAAATCACTTTCCGTCGTG
ATCCATCCAATTTCCGTCCAAGAATTAACAAATTAAATTCAATCAAAGATAATGAACAAA
AAGCTGCTGGTAATTATTTCTTCCTTGATAATGTTGAGAAAAAAAAAG